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Cooperation of B Cell Lineages in Induction of HIV-1-Broadly Neutralizing Antibodies

Cell, 2014-07, Vol.158 (3), p.481-491

2014

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Pathway level analysis of gene expression using singular value decomposition

BMC bioinformatics, 2005-09, Vol.6 (1), p.225-225, Article 225

2005

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Viral Receptor-Binding Site Antibodies with Diverse Germline Origins

Cell, 2015-05, Vol.161 (5), p.1026-1034

2015

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Broadly neutralizing human antibody that recognizes the receptor-binding pocket of influenza virus hemagglutinin

Proceedings of the National Academy of Sciences - PNAS, 2011-08, Vol.108 (34), p.14216-14221

2011

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Microbial colonization influences early B-lineage development in the gut lamina propria

Nature (London), 2013-09, Vol.501 (7465), p.112-115

2013

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Isolation of a human anti-HIV gp41 membrane proximal region neutralizing antibody by antigen-specific single B cell sorting

PloS one, 2011-09, Vol.6 (9), p.e23532

2011

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First qualification study of serum biomarkers as indicators of total body burden of osteoarthritis

PloS one, 2010-03, Vol.5 (3), p.e9739

2010

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Reconstructing a B-cell clonal lineage. I. Statistical inference of unobserved ancestors

F1000 research, 2013-04, Vol.2, p.103-103

Kepler, Thomas B

2013

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Preconfiguration of the antigen-binding site during affinity maturation of a broadly neutralizing influenza virus antibody

Proceedings of the National Academy of Sciences - PNAS, 2013-01, Vol.110 (1), p.264-269

2013

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Identification of autoantigens recognized by the 2F5 and 4E10 broadly neutralizing HIV-1 antibodies

The Journal of experimental medicine, 2013-02, Vol.210 (2), p.241-256

2013

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SoDA2: a Hidden Markov Model approach for identification of immunoglobulin rearrangements

Bioinformatics, 2010-04, Vol.26 (7), p.867-872

2010

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Immunogenic Stimulus for Germline Precursors of Antibodies that Engage the Influenza Hemagglutinin Receptor-Binding Site

Cell reports (Cambridge), 2015-12, Vol.13 (12), p.2842-2850

2015

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Stochasticity in Transcriptional Regulation: Origins, Consequences, and Mathematical Representations

Biophysical journal, 2001-12, Vol.81 (6), p.3116-3136

2001

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Inference of the HIV-1 VRC01 Antibody Lineage Unmutated Common Ancestor Reveals Alternative Pathways to Overcome a Key Glycan Barrier

Immunity (Cambridge, Mass.), 2018-12, Vol.49 (6), p.1162-1174.e8

2018

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Affinity maturation in an HIV broadly neutralizing B-cell lineage through reorientation of variable domains

Proceedings of the National Academy of Sciences - PNAS, 2014-07, Vol.111 (28), p.10275-10280

2014

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Bayesian Estimation of the Active Concentration and Affinity Constants Using Surface Plasmon Resonance Technology

PloS one, 2015-06, Vol.10 (6), p.e0130812-e0130812

2015

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Two Distinct Broadly Neutralizing Antibody Specificities of Different Clonal Lineages in a Single HIV-1-Infected Donor: Implications for Vaccine Design

Journal of Virology, 2012-04, Vol.86 (8), p.4688-4692

2012

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Structure and Diversity of the Rhesus Macaque Immunoglobulin Loci through Multiple De Novo Genome Assemblies

Frontiers in immunology, 2017-10, Vol.8, p.1407-1407

2017

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Reconstructing a B-Cell Clonal Lineage. II. Mutation, Selection, and Affinity Maturation

Frontiers in immunology, 2014-04, Vol.5, p.170-170

2014

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Reproducibility and Reuse of Adaptive Immune Receptor Repertoire Data

Frontiers in immunology, 2017-11, Vol.8, p.1418-1418

2017

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Cooperation of B Cell Lineages in Induction of HIV-1-Broadly Neutralizing Antibodies

Pathway level analysis of gene expression using singular value decomposition

Viral Receptor-Binding Site Antibodies with Diverse Germline Origins

Broadly neutralizing human antibody that recognizes the receptor-binding pocket of influenza virus hemagglutinin

Microbial colonization influences early B-lineage development in the gut lamina propria

Isolation of a human anti-HIV gp41 membrane proximal region neutralizing antibody by antigen-specific single B cell sorting

First qualification study of serum biomarkers as indicators of total body burden of osteoarthritis

Pentavalent HIV-1 vaccine protects against simian-human immunodeficiency virus challenge

Reconstructing a B-cell clonal lineage. I. Statistical inference of unobserved ancestors

Analysis of a Clonal Lineage of HIV-1 Envelope V2/V3 Conformational Epitope-Specific Broadly Neutralizing Antibodies and Their Inferred Unmutated Common Ancestors

Preconfiguration of the antigen-binding site during affinity maturation of a broadly neutralizing influenza virus antibody

Identification of autoantigens recognized by the 2F5 and 4E10 broadly neutralizing HIV-1 antibodies

HIV-1 Envelope gp41 Antibodies Can Originate from Terminal Ileum B Cells that Share Cross-Reactivity with Commensal Bacteria

SoDA2: a Hidden Markov Model approach for identification of immunoglobulin rearrangements

Immunogenic Stimulus for Germline Precursors of Antibodies that Engage the Influenza Hemagglutinin Receptor-Binding Site

Immunoglobulin Gene Insertions and Deletions in the Affinity Maturation of HIV-1 Broadly Reactive Neutralizing Antibodies

Stochasticity in Transcriptional Regulation: Origins, Consequences, and Mathematical Representations

Inference of the HIV-1 VRC01 Antibody Lineage Unmutated Common Ancestor Reveals Alternative Pathways to Overcome a Key Glycan Barrier

Affinity maturation in an HIV broadly neutralizing B-cell lineage through reorientation of variable domains

Bayesian Estimation of the Active Concentration and Affinity Constants Using Surface Plasmon Resonance Technology

Two Distinct Broadly Neutralizing Antibody Specificities of Different Clonal Lineages in a Single HIV-1-Infected Donor: Implications for Vaccine Design

Antibody Light-Chain-Restricted Recognition of the Site of Immune Pressure in the RV144 HIV-1 Vaccine Trial Is Phylogenetically Conserved

Structure and Diversity of the Rhesus Macaque Immunoglobulin Loci through Multiple De Novo Genome Assemblies

Reconstructing a B-Cell Clonal Lineage. II. Mutation, Selection, and Affinity Maturation

Reproducibility and Reuse of Adaptive Immune Receptor Repertoire Data

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