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The Gut Microbiome Is Altered in a Letrozole-Induced Mouse Model of Polycystic Ovary Syndrome

PloS one, 2016-01, Vol.11 (1), p.e0146509-e0146509

2016

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Metabolic reconstruction for metagenomic data and its application to the human microbiome

PLoS computational biology, 2012-06, Vol.8 (6), p.e1002358-e1002358

2012

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Quantitative and Qualitative β Diversity Measures Lead to Different Insights into Factors That Structure Microbial Communities

Applied and Environmental Microbiology, 2007-03, Vol.73 (5), p.1576-1585

2007

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Studying the microbiology of the indoor environment

Genome biology, 2013-01, Vol.14 (2), p.202-202

2013

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Letrozole treatment of pubertal female mice results in activational effects on reproduction, metabolism and the gut microbiome

PloS one, 2019-09, Vol.14 (9), p.e0223274

2019

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Exposure to a Healthy Gut Microbiome Protects Against Reproductive and Metabolic Dysregulation in a PCOS Mouse Model

Endocrinology (Philadelphia), 2019-05, Vol.160 (5), p.1193-1204

2019

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QIIME allows analysis of high-throughput community sequencing data

Nature methods, 2010-05, Vol.7 (5), p.335-336

2010

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Office space bacterial abundance and diversity in three metropolitan areas

PloS one, 2012-05, Vol.7 (5), p.e37849-e37849

2012

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Bacterial diversity in two Neonatal Intensive Care Units (NICUs)

PloS one, 2013-01, Vol.8 (1), p.e54703-e54703

2013

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AutoPhy: Automated phylogenetic identification of novel protein subfamilies

PloS one, 2024-01, Vol.19 (1), p.e0291801-e0291801

2024

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Age- and Sex-Dependent Patterns of Gut Microbial Diversity in Human Adults

mSystems, 2019-07, Vol.4 (4)

2019

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Microbial and metabolic succession on common building materials under high humidity conditions

Nature communications, 2019-04, Vol.10 (1), p.1767-12, Article 1767

2019

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The personal human oral microbiome obscures the effects of treatment on periodontal disease

PloS one, 2014-01, Vol.9 (1), p.e86708

2014

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Ecological succession and viability of human-associated microbiota on restroom surfaces

Applied and Environmental Microbiology, 2015-01, Vol.81 (2), p.765-773

2015

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Characterization of the salivary microbiome in patients with pancreatic cancer

PeerJ (San Francisco, CA), 2015-11, Vol.3, p.e1373-e1373, Article e1373

2015

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Data-driven mathematical and visualization approaches for removing rare features for Compositional Data Analysis (CoDA)

NAR genomics and bioinformatics, 2024-03, Vol.6 (1)

2024

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Letrozole treatment of adult female mice results in a similar reproductive phenotype but distinct changes in metabolism and the gut microbiome compared to pubertal mice

BMC microbiology, 2019-03, Vol.19 (1), p.57-15, Article 57

2019

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Metagenomic Analysis of Microbial Contamination in the U.S. Portion of the Tijuana River Watershed

International journal of environmental research and public health, 2022-12, Vol.20 (1), p.600

2022

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Meta-SourceTracker: application of Bayesian source tracking to shotgun metagenomics

PeerJ (San Francisco, CA), 2020-03, Vol.8, p.e8783-e8783, Article e8783

2020

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Compositional Data Analysis of Periodontal Disease Microbial Communities

Frontiers in microbiology, 2021-05, Vol.12, p.617949-617949

2021

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Geography and Location Are the Primary Drivers of Office Microbiome Composition

mSystems, 2016-03, Vol.1 (2)

2016

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Endosymbiont interference and microbial diversity of the Pacific coast tick, Dermacentor occidentalis , in San Diego County, California

PeerJ (San Francisco, CA), 2017-04, Vol.5, p.e3202-e3202, Article e3202

2017

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Murine Noroviruses Comprising a Single Genogroup Exhibit Biological Diversity despite Limited Sequence Divergence

Journal of Virology, 2007-10, Vol.81 (19), p.10460-10473

2007

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Genetic hypogonadal mouse model reveals niche-specific influence of reproductive axis and sex on intestinal microbial communities

Biology of sex differences, 2023-11, Vol.14 (1), p.79-79, Article 79

2023

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Viruses in the Built Environment (VIBE) meeting report

Microbiome, 2020-01, Vol.8 (1), p.1-1, Article 1

2020

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The Gut Microbiome Is Altered in a Letrozole-Induced Mouse Model of Polycystic Ovary Syndrome

Metabolic reconstruction for metagenomic data and its application to the human microbiome

Quantitative and Qualitative β Diversity Measures Lead to Different Insights into Factors That Structure Microbial Communities

Studying the microbiology of the indoor environment

Letrozole treatment of pubertal female mice results in activational effects on reproduction, metabolism and the gut microbiome

Exposure to a Healthy Gut Microbiome Protects Against Reproductive and Metabolic Dysregulation in a PCOS Mouse Model

QIIME allows analysis of high-throughput community sequencing data

Office space bacterial abundance and diversity in three metropolitan areas

Bacterial diversity in two Neonatal Intensive Care Units (NICUs)

AutoPhy: Automated phylogenetic identification of novel protein subfamilies

Age- and Sex-Dependent Patterns of Gut Microbial Diversity in Human Adults

Microbial and metabolic succession on common building materials under high humidity conditions

The personal human oral microbiome obscures the effects of treatment on periodontal disease

Ecological succession and viability of human-associated microbiota on restroom surfaces

Characterization of the salivary microbiome in patients with pancreatic cancer

Data-driven mathematical and visualization approaches for removing rare features for Compositional Data Analysis (CoDA)

Letrozole treatment of adult female mice results in a similar reproductive phenotype but distinct changes in metabolism and the gut microbiome compared to pubertal mice

Metagenomic Analysis of Microbial Contamination in the U.S. Portion of the Tijuana River Watershed

Meta-SourceTracker: application of Bayesian source tracking to shotgun metagenomics

Compositional Data Analysis of Periodontal Disease Microbial Communities

Geography and Location Are the Primary Drivers of Office Microbiome Composition

Endosymbiont interference and microbial diversity of the Pacific coast tick, Dermacentor occidentalis , in San Diego County, California

Murine Noroviruses Comprising a Single Genogroup Exhibit Biological Diversity despite Limited Sequence Divergence

Genetic hypogonadal mouse model reveals niche-specific influence of reproductive axis and sex on intestinal microbial communities

Viruses in the Built Environment (VIBE) meeting report

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