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TRANSFAC and its module TRANSCompel: transcriptional gene regulation in eukaryotes

Nucleic acids research, 2006-01, Vol.34 (Database issue), p.D108

2006

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MATCH: A tool for searching transcription factor binding sites in DNA sequences

Nucleic acids research, 2003-07, Vol.31 (13), p.3576

2003

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P-Match: transcription factor binding site search by combining patterns and weight matrices

Nucleic acids research, 2005-07, Vol.33 (Web Server issue), p.W432

2005

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TRANSFAC: transcriptional regulation, from patterns to profiles

Nucleic acids research, 2003-01, Vol.31 (1), p.374

2003

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Prediction of EVT6-NTRK3-Dependent Papillary Thyroid Cancer Using Minor Expression Profile

Bulletin of experimental biology and medicine, 2022-06, Vol.173 (2), p.252-256

2022

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Expanding the TRANSFAC database towards an expert system of regulatory molecular mechanisms

Nucleic acids research, 1999-01, Vol.27 (1), p.318

1999

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Databases on transcriptional regulation: TRANSFAC, TRRD and COMPEL

Nucleic acids research, 1998-01, Vol.26 (1), p.362

1998

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Master Regulators Associated with Poor Prognosis in Glioblastoma Multiforme

Biochemistry (Moscow). Supplement. Series B, Biomedical chemistry, 2021-10, Vol.15 (4), p.263-273

2021

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Corrigendum to “Data on master regulators and transcription factor binding sites found by upstream analysis of multi-omics data on methotrexate resistance of colon cancer” [Data Brief. 10 (2016) 499–504]

Data in brief, 2018-02, Vol.16, p.1104-1104

Kel, A.E.

2018

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TRANSFAC, TRRD and COMPEL: towards a federated database system on transcriptional regulation

Nucleic acids research, 1997-01, Vol.25 (1), p.265

1997

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Computer-assisted identification of cell cycle-related genes: new targets for E2F transcription factors

Journal of molecular biology, 2001-05, Vol.309 (1), p.99-120

2001

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Transcription regulatory regions database (TRRD): its status in 2000

Nucleic acids research, 2000-01, Vol.28 (1), p.298

2000

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Eukaryotic promoter recognition by binding sites for transcription factors

Bioinformatics, 1995-10, Vol.11 (5), p.477-488

1995

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Transcription Regulatory Regions Database (TRRD):its status in 1999

Nucleic acids research, 1999-01, Vol.27 (1), p.303

1999

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SITEVIDEO: a computer system for functional site analysis and recognition. Investigation of the human splice sites

Bioinformatics, 1993-12, Vol.9 (6), p.617-627

1993

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COMPEL: a database on composite regulatory elements providing combinatorial transcriptional regulation

Nucleic acids research, 2000-01, Vol.28 (1), p.311

2000

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A compilation of composite regulatory elements affecting gene transcription in vertebrates

Nucleic acids research, 1995-10, Vol.23 (20), p.4097-4103

1995

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Molecular genetic characterization of the regulatory region of the Xist gene in the common vole Microtus rossiaemeridionalis

Russian journal of genetics, 2009-10, Vol.45 (10), p.1182-1191

2009

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Eukaryotic mRNAs encoding abundant and scarce proteins are statistically dissimilar in many structural features

FEBS letters, 1998-12, Vol.440 (3), p.351-355

1998

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Molecular genetic characterization of the regulatory region of the Xist gene in the common vole Microtus rossiaemeridionalis

Genetika, 2009-10, Vol.45 (10), p.1341

2009

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Comparative analysis of the DXPas34 regulatory region in rodents

Russian journal of genetics, 2010-10, Vol.46 (10), p.1236-1239

2010

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Complex gene network in cell cycle regulation: Central role of the E2F family of transcription factors

Molecular biology (New York), 1997-07, Vol.31 (4), p.548-561

1997

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TRRD and COMPEL databases on transcription linked to TRANSFACAS as tools for analysis and recognition of regulatory sequences

Lecture notes in computer science, 1997, p.99-105

1997

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Composite regulatory elements: Classification and description in the COMPEL database

Molecular biology (New York), 1997-07, Vol.31 (4), p.498-512

1997

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Integrating the knowledge on gene regulation by a federated database approach: TRANSFAC, TRRD, and COMPEL

Molecular biology (New York), 1997-07, Vol.31 (4), p.531-539

1997

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TRANSFAC and its module TRANSCompel: transcriptional gene regulation in eukaryotes

MATCH: A tool for searching transcription factor binding sites in DNA sequences

P-Match: transcription factor binding site search by combining patterns and weight matrices

TRANSFAC: transcriptional regulation, from patterns to profiles

Prediction of EVT6-NTRK3-Dependent Papillary Thyroid Cancer Using Minor Expression Profile

Expanding the TRANSFAC database towards an expert system of regulatory molecular mechanisms

Databases on transcriptional regulation: TRANSFAC, TRRD and COMPEL

Master Regulators Associated with Poor Prognosis in Glioblastoma Multiforme

Corrigendum to “Data on master regulators and transcription factor binding sites found by upstream analysis of multi-omics data on methotrexate resistance of colon cancer” [Data Brief. 10 (2016) 499–504]

TRANSFAC, TRRD and COMPEL: towards a federated database system on transcriptional regulation

Computer-assisted identification of cell cycle-related genes: new targets for E2F transcription factors

Transcription regulatory regions database (TRRD): its status in 2000

Eukaryotic promoter recognition by binding sites for transcription factors

Transcription Regulatory Regions Database (TRRD):its status in 1999

SITEVIDEO: a computer system for functional site analysis and recognition. Investigation of the human splice sites

COMPEL: a database on composite regulatory elements providing combinatorial transcriptional regulation

A compilation of composite regulatory elements affecting gene transcription in vertebrates

Molecular genetic characterization of the regulatory region of the Xist gene in the common vole Microtus rossiaemeridionalis

Eukaryotic mRNAs encoding abundant and scarce proteins are statistically dissimilar in many structural features

Molecular genetic characterization of the regulatory region of the Xist gene in the common vole Microtus rossiaemeridionalis

Comparative analysis of the DXPas34 regulatory region in rodents

Complex gene network in cell cycle regulation: Central role of the E2F family of transcription factors

TRRD and COMPEL databases on transcription linked to TRANSFACAS as tools for analysis and recognition of regulatory sequences

Composite regulatory elements: Classification and description in the COMPEL database

Integrating the knowledge on gene regulation by a federated database approach: TRANSFAC, TRRD, and COMPEL

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