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Predicting Heteropolymer Interactions: Demixing and Hypermixing of Disordered Protein Sequences

Physical review. X, 2024-07, Vol.14 (3), p.031011, Article 031011

2024

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Role of measurement-feedback separation in autonomous Maxwell's demons

New journal of physics, 2015-04, Vol.17 (4), p.45012

2015

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Homeostatic Epidermal Stem Cell Self-Renewal Is Driven by Local Differentiation

Cell stem cell, 2018-11, Vol.23 (5), p.677-686.e4

2018

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Probing the rules of cell coordination in live tissues by interpretable machine learning based on graph neural networks

PLoS computational biology, 2022-09, Vol.18 (9), p.e1010477

2022

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Spatiotemporal coordination of stem cell commitment during epidermal homeostasis

Science (American Association for the Advancement of Science), 2016-06, Vol.352 (6292), p.1471-1474

2016

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A large pool of actively cycling progenitors orchestrates self-renewal and injury repair of an ectodermal appendage

Nature cell biology, 2019-09, Vol.21 (9), p.1102-1112

2019

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Nonequilibrium Dissipation-free Transport in F1-ATPase and the Thermodynamic Role of Asymmetric Allosterism

Biophysical journal, 2014-06, Vol.106 (11), p.2450-2457

2014

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Surface wetting by kinetic control of liquid-liquid phase separation

Physical review. E, 2021-10, Vol.104 (4), Article L042801

2021

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Activity-induced phase transition in a quantum many-body system

Physical review research, 2022-03, Vol.4 (1), Article 013194

2022

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Topological defects control collective dynamics in neural progenitor cell cultures

Nature (London), 2017-05, Vol.545 (7654), p.327-331

2017

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Fluctuation theorem for hidden entropy production

Physical review. E, Statistical, nonlinear, and soft matter physics, 2013-08, Vol.88 (2), p.022147-022147, Article 022147

2013

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Dynamical crossover in a stochastic model of cell fate decision

Physical review. E, 2017-07, Vol.96 (1-1), p.012401-012401, Article 012401

2017

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Unattainability of Carnot efficiency in thermal motors: Coarse graining and entropy production of Feynman-Smoluchowski ratchets

Physical review. E, 2018-08, Vol.98 (2-1), p.022102-022102, Article 022102

2018

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Homeotic and nonhomeotic patterns in the tetrapod vertebral formula

Proceedings of the National Academy of Sciences - PNAS, 2024-11, Vol.121 (47)

2024

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Early-career researchers in the time of COVID-19: Benefits of structural support

Cell stem cell, 2021-05, Vol.28 (5), p.814-815

2021

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Efficiency of Free Energy Transduction in Autonomous Systems

Journal of the Physical Society of Japan, 2011-08, Vol.80 (8), p.83003

2011

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LapTrack: linear assignment particle tracking with tunable metrics

Bioinformatics (Oxford, England), 2023-01, Vol.39 (1)

2023

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Oscillatory Control of Factors Determining Multipotency and Fate in Mouse Neural Progenitors

Science (American Association for the Advancement of Science), 2013-12, Vol.342 (6163), p.1203-1208

2013

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Chromatin state switching in a polymer model with mark-conformation coupling

Physical review. E, 2019-12, Vol.100 (6-1), p.060401-060401, Article 060401

2019

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In Vitro Reconstitution of Tissue Homeostasis and Stochastic Cell Fate Choice

Biophysical journal, 2017-02, Vol.112 (3), p.434a-434a

2017

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Activity-induced ferromagnetism in one-dimensional quantum many-body systems

Physical review research, 2024-04, Vol.6 (2), Article 023096

2024

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Invariance of steady-state thermodynamics between different scales of description

Physical review. E, Statistical, nonlinear, and soft matter physics, 2015-01, Vol.91 (1), p.012115-012115, Article 012115

2015

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Entropy Production of Nanosystems with Time Scale Separation

Physical review letters, 2016-08, Vol.117 (7), p.070601-070601, Article 070601

2016

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Gradual differentiation uncoupled from cell cycle exit generates heterogeneity in the epidermal stem cell layer

Nature cell biology, 2022-12, Vol.24 (12), p.1692-1700

2022

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3P144 Nonequilibrium dissipation-free transport of F1-ATPase and the thermodynamic role of asymmetric allosterism(11. Molecular motor,Poster)

Seibutsu Butsuri, 2013/09/13, Vol.53(supplement1-2), pp.S235

2013

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Predicting Heteropolymer Interactions: Demixing and Hypermixing of Disordered Protein Sequences

Role of measurement-feedback separation in autonomous Maxwell's demons

Homeostatic Epidermal Stem Cell Self-Renewal Is Driven by Local Differentiation

Probing the rules of cell coordination in live tissues by interpretable machine learning based on graph neural networks

Spatiotemporal coordination of stem cell commitment during epidermal homeostasis

A large pool of actively cycling progenitors orchestrates self-renewal and injury repair of an ectodermal appendage

Nonequilibrium Dissipation-free Transport in F1-ATPase and the Thermodynamic Role of Asymmetric Allosterism

Surface wetting by kinetic control of liquid-liquid phase separation

Activity-induced phase transition in a quantum many-body system

Topological defects control collective dynamics in neural progenitor cell cultures

Fluctuation theorem for hidden entropy production

Dynamical crossover in a stochastic model of cell fate decision

Unattainability of Carnot efficiency in thermal motors: Coarse graining and entropy production of Feynman-Smoluchowski ratchets

Homeotic and nonhomeotic patterns in the tetrapod vertebral formula

Early-career researchers in the time of COVID-19: Benefits of structural support

Efficiency of Free Energy Transduction in Autonomous Systems

LapTrack: linear assignment particle tracking with tunable metrics

Oscillatory Control of Factors Determining Multipotency and Fate in Mouse Neural Progenitors

Chromatin state switching in a polymer model with mark-conformation coupling

In Vitro Reconstitution of Tissue Homeostasis and Stochastic Cell Fate Choice

Activity-induced ferromagnetism in one-dimensional quantum many-body systems

Invariance of steady-state thermodynamics between different scales of description

Entropy Production of Nanosystems with Time Scale Separation

Gradual differentiation uncoupled from cell cycle exit generates heterogeneity in the epidermal stem cell layer

3P144 Nonequilibrium dissipation-free transport of F1-ATPase and the thermodynamic role of asymmetric allosterism(11. Molecular motor,Poster)

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