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Normalization and missing value imputation for label-free LC-MS analysis

BMC bioinformatics, 2012-11, Vol.13 Suppl 16 (Suppl 16), p.S5-S5, Article S5

2012

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Population scale mapping of transposable element diversity reveals links to gene regulation and epigenomic variation

eLife, 2016-12, Vol.5

2016

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Extensive transcriptomic and epigenomic remodelling occurs during Arabidopsis thaliana germination

Genome Biology, 2017-09, Vol.18 (1), p.172-172, Article 172

2017

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Metabolomics data normalization with EigenMS

PloS one, 2014-12, Vol.9 (12), p.e116221-e116221

2014

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HOME: a histogram based machine learning approach for effective identification of differentially methylated regions

BMC bioinformatics, 2019-05, Vol.20 (1), p.253-253, Article 253

2019

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Thoracic electrical impedance tomography identifies heterogeneity in lungs associated with respiratory disease in cattle. A pilot study

Frontiers in veterinary science, 2024-01, Vol.10, p.1275013-1275013

2024

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LIQUID CHROMATOGRAPHY MASS SPECTROMETRY-BASED PROTEOMICS: BIOLOGICAL AND TECHNOLOGICAL ASPECTS

The annals of applied statistics, 2010-12, Vol.4 (4), p.1797-1823

2010

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Lipopolysaccharide-induced interferon response networks at birth are predictive of severe viral lower respiratory infections in the first year of life

Frontiers in immunology, 2022-08, Vol.13, p.876654-876654

2022

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Normalization of peak intensities in bottom-up MS-based proteomics using singular value decomposition

Bioinformatics, 2009-10, Vol.25 (19), p.2573-2580

2009

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A phase I clinical trial assessing the safety, tolerability, and pharmacokinetics of inhaled ethanol in humans as a potential treatment for respiratory tract infections

Frontiers in medicine, 2024-03, Vol.11, p.1324686-1324686

2024

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An introspective comparison of random forest-based classifiers for the analysis of cluster-correlated data by way of RF

PloS one, 2009-09, Vol.4 (9), p.e7087-e7087

2009

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Real time monitoring of respiratory viral infections in cohort studies using a smartphone app

iScience, 2024-10, Vol.27 (10), p.110912, Article 110912

2024

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Airway epithelium respiratory illnesses and allergy (AERIAL) birth cohort: study protocol

Frontiers in allergy, 2024-04, Vol.5, p.1349741-1349741

2024

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Aspergillus Infections and Progression of Structural Lung Disease in Children with Cystic Fibrosis

American journal of respiratory and critical care medicine, 2020-03, Vol.201 (6), p.688-696

2020

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Ivacaftor and Airway Inflammation in Preschool Children with Cystic Fibrosis

American journal of respiratory and critical care medicine, 2021-09, Vol.204 (5), p.605-608

2021

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DanteR: an extensible R-based tool for quantitative analysis of -omics data

Bioinformatics, 2012-09, Vol.28 (18), p.2404-2406

2012

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Label-Free Quantitative LC–MS Proteomics of Alzheimer’s Disease and Normally Aged Human Brains

Journal of proteome research, 2012-06, Vol.11 (6), p.3053-3067

2012

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PrepMS: TOF MS data graphical preprocessing tool

Bioinformatics, 2007-01, Vol.23 (2), p.264-265

2007

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Novel Elements of the Chondrocyte Stress Response Identified Using an in Vitro Model of Mouse Cartilage Degradation

Journal of proteome research, 2016-03, Vol.15 (3), p.1033-1050

2016

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AI-Driven Cell Tracking to Enable High-Throughput Drug Screening Targeting Airway Epithelial Repair for Children with Asthma

Journal of personalized medicine, 2022-05, Vol.12 (5), p.809

2022

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mGrid: a load-balanced distributed computing environment for the remote execution of the user-defined Matlab code

BMC bioinformatics, 2006-03, Vol.7 (1), p.139-139, Article 139

2006

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A Statistical Method for Assessing Peptide Identification Confidence in Accurate Mass and Time Tag Proteomics

Analytical chemistry (Washington), 2011-08, Vol.83 (16), p.6135-6140

2011

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Personal Network Inference Unveils Heterogeneous Immune Response Patterns to Viral Infection in Children with Acute Wheezing

Journal of personalized medicine, 2021-12, Vol.11 (12), p.1293

2021

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Serum metabolic profile predicts adverse central haemodynamics in patients with type 2 diabetes mellitus

Acta diabetologica, 2016-06, Vol.53 (3), p.367-375

2016

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Normalization and missing value imputation for label-free LC-MS analysis

Population scale mapping of transposable element diversity reveals links to gene regulation and epigenomic variation

Extensive transcriptomic and epigenomic remodelling occurs during Arabidopsis thaliana germination

Metabolomics data normalization with EigenMS

HOME: a histogram based machine learning approach for effective identification of differentially methylated regions

Thoracic electrical impedance tomography identifies heterogeneity in lungs associated with respiratory disease in cattle. A pilot study

LIQUID CHROMATOGRAPHY MASS SPECTROMETRY-BASED PROTEOMICS: BIOLOGICAL AND TECHNOLOGICAL ASPECTS

Lipopolysaccharide-induced interferon response networks at birth are predictive of severe viral lower respiratory infections in the first year of life

Normalization of peak intensities in bottom-up MS-based proteomics using singular value decomposition

A phase I clinical trial assessing the safety, tolerability, and pharmacokinetics of inhaled ethanol in humans as a potential treatment for respiratory tract infections

An introspective comparison of random forest-based classifiers for the analysis of cluster-correlated data by way of RF

Real time monitoring of respiratory viral infections in cohort studies using a smartphone app

Airway epithelium respiratory illnesses and allergy (AERIAL) birth cohort: study protocol

Aspergillus Infections and Progression of Structural Lung Disease in Children with Cystic Fibrosis

Ivacaftor and Airway Inflammation in Preschool Children with Cystic Fibrosis

DanteR: an extensible R-based tool for quantitative analysis of -omics data

Label-Free Quantitative LC–MS Proteomics of Alzheimer’s Disease and Normally Aged Human Brains

PrepMS: TOF MS data graphical preprocessing tool

Novel Elements of the Chondrocyte Stress Response Identified Using an in Vitro Model of Mouse Cartilage Degradation

AI-Driven Cell Tracking to Enable High-Throughput Drug Screening Targeting Airway Epithelial Repair for Children with Asthma

mGrid: a load-balanced distributed computing environment for the remote execution of the user-defined Matlab code

A Statistical Method for Assessing Peptide Identification Confidence in Accurate Mass and Time Tag Proteomics

Aberrant cell migration contributes to defective airway epithelial repair in childhood wheeze

Personal Network Inference Unveils Heterogeneous Immune Response Patterns to Viral Infection in Children with Acute Wheezing

Serum metabolic profile predicts adverse central haemodynamics in patients with type 2 diabetes mellitus

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