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What are housekeeping genes?

PLoS computational biology, 2022-07, Vol.18 (7), p.e1010295-e1010295

2022

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Integration of single-cell RNA-seq data into population models to characterize cancer metabolism

PLoS computational biology, 2019-02, Vol.15 (2), p.e1006733

2019

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Metabolic modelling as a powerful tool to identify critical components of Pneumocystis growth medium

PLoS computational biology, 2024-10, Vol.20 (10), p.e1012545

2024

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A diel multi-tissue genome-scale metabolic model of Vitis vinifera

PLoS computational biology, 2024-10, Vol.20 (10), p.e1012506

2024

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A quantitative description of light-limited cyanobacterial growth using flux balance analysis

PLoS computational biology, 2024-08, Vol.20 (8), p.e1012280

2024

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scBoolSeq: Linking scRNA-seq statistics and Boolean dynamics

PLoS computational biology, 2024-07, Vol.20 (7), p.e1011620-25

2024

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Meneco, a Topology-Based Gap-Filling Tool Applicable to Degraded Genome-Wide Metabolic Networks

PLoS computational biology, 2017-01, Vol.13 (1), p.e1005276-e1005276

2017

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Logistic PCA explains differences between genome-scale metabolic models in terms of metabolic pathways

PLoS computational biology, 2024-06, Vol.20 (6), p.e1012236

2024

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The first multi-tissue genome-scale metabolic model of a woody plant highlights suberin biosynthesis pathways in Quercus suber

PLoS computational biology, 2023-09, Vol.19 (9), p.e1011499-e1011499

2023

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A pipeline for the reconstruction and evaluation of context-specific human metabolic models at a large-scale

PLoS computational biology, 2022-06, Vol.18 (6), p.1-24

2022

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From elementary flux modes to elementary flux vectors: Metabolic pathway analysis with arbitrary linear flux constraints

PLoS computational biology, 2017-04, Vol.13 (4), p.e1005409-e1005409

2017

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Designing microbial communities to maximize the thermodynamic driving force for the production of chemicals

PLoS computational biology, 2021-06, Vol.17 (6), p.e1009093-e1009093

2021

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Elementary Growth Modes provide a molecular description of cellular self-fabrication

PLoS computational biology, 2020-01, Vol.16 (1), p.e1007559-e1007559

2020

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Elementary vectors and autocatalytic sets for resource allocation in next-generation models of cellular growth

PLoS computational biology, 2022-02, Vol.18 (2), p.e1009843-e1009843

2022

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DEXOM: Diversity-based enumeration of optimal context-specific metabolic networks

PLoS computational biology, 2021-02, Vol.17 (2), p.e1008730

2021

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Computational modeling of the gut microbiota reveals putative metabolic mechanisms of recurrent Clostridioides difficile infection

PLoS computational biology, 2021-02, Vol.17 (2), p.e1008782-e1008782

2021

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Heterogeneity coordinates bacterial multi-gene expression in single cells

PLoS computational biology, 2020, Vol.16 (1), p.e1007643-e1007643

2020

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Data integration uncovers the metabolic bases of phenotypic variation in yeast

PLoS computational biology, 2021-07, Vol.17 (7), p.e1009157-e1009157

2021

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Catalytic promiscuity in the RNA World may have aided the evolution of prebiotic metabolism

PLoS computational biology, 2021-01, Vol.17 (1), p.e1008634-e1008634

2021

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Extreme pathway analysis reveals the organizing rules of metabolic regulation

PloS one, 2019-02, Vol.14 (2), p.e0210539-e0210539

2019

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Flux-based hierarchical organization of Escherichia coli's metabolic network

PLoS computational biology, 2020-04, Vol.16 (4), p.e1007832-e1007832

2020

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InN/InAlN heterostructures for new generation of fast electronics

Journal of applied physics, 2024-06, Vol.135 (24)

2024

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Drying curve modelling of blanched carrot cubes under natural convection condition

Journal of food engineering, 2007-09, Vol.82 (2), p.160-170

2007

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Highly conductive cathode materials for Li-ion batteries prepared by thermal nanocrystallization of selected oxide glasses

Materials science & engineering. B, Solid-state materials for advanced technology, 2016-11, Vol.213, p.140-147

2016

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Exhaustive Analysis of a Genotype Space Comprising 1015 Central Carbon Metabolisms Reveals an Organization Conducive to Metabolic Innovation

PLoS computational biology, 2015-08, Vol.11 (8), p.e1004329

2015

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What are housekeeping genes?

Integration of single-cell RNA-seq data into population models to characterize cancer metabolism

Metabolic modelling as a powerful tool to identify critical components of Pneumocystis growth medium

A diel multi-tissue genome-scale metabolic model of Vitis vinifera

A quantitative description of light-limited cyanobacterial growth using flux balance analysis

scBoolSeq: Linking scRNA-seq statistics and Boolean dynamics

Meneco, a Topology-Based Gap-Filling Tool Applicable to Degraded Genome-Wide Metabolic Networks

Logistic PCA explains differences between genome-scale metabolic models in terms of metabolic pathways

The first multi-tissue genome-scale metabolic model of a woody plant highlights suberin biosynthesis pathways in Quercus suber

A pipeline for the reconstruction and evaluation of context-specific human metabolic models at a large-scale

From elementary flux modes to elementary flux vectors: Metabolic pathway analysis with arbitrary linear flux constraints

Designing microbial communities to maximize the thermodynamic driving force for the production of chemicals

Elementary Growth Modes provide a molecular description of cellular self-fabrication

Elementary vectors and autocatalytic sets for resource allocation in next-generation models of cellular growth

DEXOM: Diversity-based enumeration of optimal context-specific metabolic networks

Computational modeling of the gut microbiota reveals putative metabolic mechanisms of recurrent Clostridioides difficile infection

Heterogeneity coordinates bacterial multi-gene expression in single cells

Data integration uncovers the metabolic bases of phenotypic variation in yeast

Catalytic promiscuity in the RNA World may have aided the evolution of prebiotic metabolism

Extreme pathway analysis reveals the organizing rules of metabolic regulation

Flux-based hierarchical organization of Escherichia coli's metabolic network

InN/InAlN heterostructures for new generation of fast electronics

Drying curve modelling of blanched carrot cubes under natural convection condition

Highly conductive cathode materials for Li-ion batteries prepared by thermal nanocrystallization of selected oxide glasses

Exhaustive Analysis of a Genotype Space Comprising 1015 Central Carbon Metabolisms Reveals an Organization Conducive to Metabolic Innovation

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