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PathSeq: software to identify or discover microbes by deep sequencing of human tissue

Nature biotechnology, 2011-05, Vol.29 (5), p.393-396

2011

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EGFR variant heterogeneity in glioblastoma resolved through single-nucleus sequencing

Cancer discovery, 2014-08, Vol.4 (8), p.956-971

2014

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Inhibitor-Sensitive FGFR2 and FGFR3 Mutations in Lung Squamous Cell Carcinoma

Cancer research (Chicago, Ill.), 2013-08, Vol.73 (16), p.5195-5205

2013

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The tumor virus landscape of AIDS-related lymphomas

Blood, 2015-05, Vol.125 (20), p.e14-e22

2015

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Calibrating genomic and allelic coverage bias in single-cell sequencing

Nature communications, 2015-04, Vol.6 (1), p.6822-6822, Article 6822

2015

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TP53 mutations emerge with HDM2 inhibitor SAR405838 treatment in de-differentiated liposarcoma

Nature communications, 2016-08, Vol.7 (1), p.12609-12609, Article 12609

2016

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Sequence-Based Discovery of Bradyrhizobium enterica in Cord Colitis Syndrome

The New England journal of medicine, 2013-08, Vol.369 (6), p.517-528

2013

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A bipotential precursor population for pancreas and liver within the embryonic endoderm

Development (Cambridge), 2001-03, Vol.128 (6), p.871-881

2001

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Initiation of Mammalian Liver Development from Endoderm by Fibroblast Growth Factors

Science (American Association for the Advancement of Science), 1999-06, Vol.284 (5422), p.1998-2003

1999

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A novel totivirus and piscine reovirus (PRV) in Atlantic salmon (Salmo salar) with cardiomyopathy syndrome (CMS)

Virology journal, 2010-11, Vol.7 (1), p.309-309, Article 309

2010

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CREB-Binding Protein Modulates Repeat Instability in a Drosophila Model for PolyQ Disease

Science (American Association for the Advancement of Science), 2007-03, Vol.315 (5820), p.1857-1859

2007

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Genomic analysis identifies association of Fusobacterium with colorectal carcinoma

Genome research, 2012-02, Vol.22 (2), p.292-298

2012

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Discovery and prioritization of somatic mutations in diffuse large B-cell lymphoma (DLBCL) by whole-exome sequencing

Proceedings of the National Academy of Sciences - PNAS, 2012-03, Vol.109 (10), p.3879-3884

2012

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Pathogen discovery in AIDS-related lymphoma by high-throughput sequencing

Infectious agents and cancer, 2012-04, Vol.7 (S1), p.P45-P45, Article P45

2012

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Preventing Ataxin-3 protein cleavage mitigates degeneration in a Drosophila model of SCA3

Human molecular genetics, 2009-12, Vol.18 (24), p.4843-4852

2009

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Synergistic activity and heterogeneous acquired resistance of combined MDM2 and MEK inhibition in KRAS mutant cancers

Oncogene, 2017-11, Vol.36 (47), p.6581-6591

2017

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Malawi polyomavirus is a prevalent human virus that interacts with known tumor suppressors

Journal of virology, 2015-01, Vol.89 (1), p.857-862

2015

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Prenylcysteine carboxylmethyltransferase is essential for the earliest stages of liver development in mice

Gastroenterology (New York, N.Y. 1943), 2002-07, Vol.123 (1), p.345-351

2002

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Abstract 5775: Identification of SAR439859, an orally bioavailable selective estrogen receptor degrader (SERD) that has strong anti-tumor activity in wild-type and mutant ER+ breast cancer models

Cancer research (Chicago, Ill.), 2018-07, Vol.78 (13_Supplement), p.5775-5775

2018

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TP53 mutations emerge in circulating cell-free DNA obtained from patients undergoing treatment with the HDM2 antagonist SAR405838

Journal of clinical oncology, 2015-05, Vol.33 (15_suppl), p.2515-2515

2015

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A121: In Search of Infectious Triggers of Periodic Fever, Aphthous Stomatitis, Pharyngitis and Adenitis Syndrome

Arthritis & rheumatology (Hoboken, N.J.), 2014-03, Vol.66 (S3), p.S158-S158

2014

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High Throughput Sequencing-Based Pathogen Discovery In Multiple Myeloma

Blood, 2013-11, Vol.122 (21), p.5322-5322

2013

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Abstract 1501: Pan-cancer PathSeq analysis on TCGA data for pathogen discovery

Cancer research (Chicago, Ill.), 2013-04, Vol.73 (8_Supplement), p.1501-1501

2013

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Abstract 4149: Transcriptomic and pathogen analysis in bladder cancer primary tumor and metastasis pairs

Cancer research (Chicago, Ill.), 2013-04, Vol.73 (8_Supplement), p.4149-4149

2013

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PathSeq: A comprehensive computational tool for the identification or discovery of microorganisms by deep sequencing of human tissue

Nature biotechnology, 2011-05, Vol.29 (5), p.393-396

2011

Volltextzugriff (PDF)

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PathSeq: software to identify or discover microbes by deep sequencing of human tissue

EGFR variant heterogeneity in glioblastoma resolved through single-nucleus sequencing

Inhibitor-Sensitive FGFR2 and FGFR3 Mutations in Lung Squamous Cell Carcinoma

The tumor virus landscape of AIDS-related lymphomas

Calibrating genomic and allelic coverage bias in single-cell sequencing

TP53 mutations emerge with HDM2 inhibitor SAR405838 treatment in de-differentiated liposarcoma

Sequence-Based Discovery of Bradyrhizobium enterica in Cord Colitis Syndrome

A bipotential precursor population for pancreas and liver within the embryonic endoderm

Initiation of Mammalian Liver Development from Endoderm by Fibroblast Growth Factors

A novel totivirus and piscine reovirus (PRV) in Atlantic salmon (Salmo salar) with cardiomyopathy syndrome (CMS)

CREB-Binding Protein Modulates Repeat Instability in a Drosophila Model for PolyQ Disease

Genomic analysis identifies association of Fusobacterium with colorectal carcinoma

Discovery and prioritization of somatic mutations in diffuse large B-cell lymphoma (DLBCL) by whole-exome sequencing

Pathogen discovery in AIDS-related lymphoma by high-throughput sequencing

Preventing Ataxin-3 protein cleavage mitigates degeneration in a Drosophila model of SCA3

Synergistic activity and heterogeneous acquired resistance of combined MDM2 and MEK inhibition in KRAS mutant cancers

Malawi polyomavirus is a prevalent human virus that interacts with known tumor suppressors

Prenylcysteine carboxylmethyltransferase is essential for the earliest stages of liver development in mice

Abstract 5775: Identification of SAR439859, an orally bioavailable selective estrogen receptor degrader (SERD) that has strong anti-tumor activity in wild-type and mutant ER+ breast cancer models

TP53 mutations emerge in circulating cell-free DNA obtained from patients undergoing treatment with the HDM2 antagonist SAR405838

A121: In Search of Infectious Triggers of Periodic Fever, Aphthous Stomatitis, Pharyngitis and Adenitis Syndrome

High Throughput Sequencing-Based Pathogen Discovery In Multiple Myeloma

Abstract 1501: Pan-cancer PathSeq analysis on TCGA data for pathogen discovery

Abstract 4149: Transcriptomic and pathogen analysis in bladder cancer primary tumor and metastasis pairs

PathSeq: A comprehensive computational tool for the identification or discovery of microorganisms by deep sequencing of human tissue

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