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Quantitative Imaging of Gut Microbiota Spatial Organization

Cell host & microbe, 2015-10, Vol.18 (4), p.478-488

2015

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Seasonal cycling in the gut microbiome of the Hadza hunter-gatherers of Tanzania

Science (American Association for the Advancement of Science), 2017-08, Vol.357 (6353), p.802-806

2017

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Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry

Nature methods, 2007-03, Vol.4 (3), p.207-214

2007

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Gut-microbiota-targeted diets modulate human immune status

Cell, 2021-08, Vol.184 (16), p.4137-4153.e14

2021

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The Phosphoproteomes of Plasmodium falciparum and Toxoplasma gondii Reveal Unusual Adaptations Within and Beyond the Parasites' Boundaries

Cell host & microbe, 2011-10, Vol.10 (4), p.410-419

2011

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Genetic dissection of Flaviviridae host factors through genome-scale CRISPR screens

Nature (London), 2016-07, Vol.535 (7610), p.159-163

2016

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Predicting HLA class II antigen presentation through integrated deep learning

Nature biotechnology, 2019-11, Vol.37 (11), p.1332-1343

2019

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Target-decoy search strategy for mass spectrometry-based proteomics

Methods in molecular biology (Clifton, N.J.), 2010-01, Vol.604, p.55

2010

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Integrative proteomics and bioinformatic prediction enable a high-confidence apicoplast proteome in malaria parasites

PLoS biology, 2018-09, Vol.16 (9), p.e2005895-e2005895

2018

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A Tissue-Specific Atlas of Mouse Protein Phosphorylation and Expression

Cell, 2010-12, Vol.143 (7), p.1174-1189

2010

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Ribosomal protein RPL26 is the principal target of UFMylation

Proceedings of the National Academy of Sciences - PNAS, 2019-01, Vol.116 (4), p.1299-1308

2019

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Host-Microbiota Interactions in the Pathogenesis of Antibiotic-Associated Diseases

Cell reports (Cambridge), 2016-02, Vol.14 (5), p.1049-1061

2016

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Acute myeloid leukemia immunopeptidome reveals HLA presentation of mutated nucleophosmin

PloS one, 2019-07, Vol.14 (7), p.e0219547-e0219547

2019

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Precise regulation of the relative rates of surface area and volume synthesis in bacterial cells growing in dynamic environments

Nature communications, 2021-03, Vol.12 (1), p.1975-1975, Article 1975

2021

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Role of disease-associated tolerance in infectious superspreaders

Proceedings of the National Academy of Sciences - PNAS, 2014-11, Vol.111 (44), p.15780-15785

2014

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An efficient urine peptidomics workflow identifies chemically defined dietary gluten peptides from patients with celiac disease

Nature communications, 2022-02, Vol.13 (1), p.888-888, Article 888

2022

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Comparative evaluation of mass spectrometry platforms used in large-scale proteomics investigations

Nature methods, 2005-09, Vol.2 (9), p.667-675

2005

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Identification of beta-secretase (BACE1) substrates using quantitative proteomics

PloS one, 2009-12, Vol.4 (12), p.e8477-e8477

2009

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A pumpless microfluidic device driven by surface tension for pancreatic islet analysis

Biomedical microdevices, 2016-10, Vol.18 (5), p.80-9

2016

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Tip60-mediated H2A.Z acetylation promotes neuronal fate specification and bivalent gene activation

Molecular cell, 2022-12, Vol.82 (24), p.4627-4646.e14

2022

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Large-Scale Characterization of HeLa Cell Nuclear Phosphoproteins

Proceedings of the National Academy of Sciences - PNAS, 2004-08, Vol.101 (33), p.12130-12135

2004

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A proteomics approach to understanding protein ubiquitination

Nature biotechnology, 2003-08, Vol.21 (8), p.921-926

2003

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Proteomic profiling of gamma-secretase substrates and mapping of substrate requirements

PLoS biology, 2008-10, Vol.6 (10), p.e257-e257

2008

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Isotope-targeted glycoproteomics (IsoTaG) analysis of sialylated N- and O-glycopeptides on an Orbitrap Fusion Tribrid using azido and alkynyl sugars

Analytical and bioanalytical chemistry, 2017-01, Vol.409 (2), p.579-588

2017

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Host-centric Proteomics of Stool: A Novel Strategy Focused on intestinal Responses to the Gut Microbiota

Molecular & cellular proteomics, 2013-11, Vol.12 (11), p.3310-3318

2013

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Quantitative Imaging of Gut Microbiota Spatial Organization

Seasonal cycling in the gut microbiome of the Hadza hunter-gatherers of Tanzania

Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry

Gut-microbiota-targeted diets modulate human immune status

The Phosphoproteomes of Plasmodium falciparum and Toxoplasma gondii Reveal Unusual Adaptations Within and Beyond the Parasites' Boundaries

Genetic dissection of Flaviviridae host factors through genome-scale CRISPR screens

Predicting HLA class II antigen presentation through integrated deep learning

Target-decoy search strategy for mass spectrometry-based proteomics

Integrative proteomics and bioinformatic prediction enable a high-confidence apicoplast proteome in malaria parasites

A Tissue-Specific Atlas of Mouse Protein Phosphorylation and Expression

Ribosomal protein RPL26 is the principal target of UFMylation

Host-Microbiota Interactions in the Pathogenesis of Antibiotic-Associated Diseases

Acute myeloid leukemia immunopeptidome reveals HLA presentation of mutated nucleophosmin

Precise regulation of the relative rates of surface area and volume synthesis in bacterial cells growing in dynamic environments

Role of disease-associated tolerance in infectious superspreaders

An efficient urine peptidomics workflow identifies chemically defined dietary gluten peptides from patients with celiac disease

Comparative evaluation of mass spectrometry platforms used in large-scale proteomics investigations

Identification of beta-secretase (BACE1) substrates using quantitative proteomics

A pumpless microfluidic device driven by surface tension for pancreatic islet analysis

Tip60-mediated H2A.Z acetylation promotes neuronal fate specification and bivalent gene activation

Large-Scale Characterization of HeLa Cell Nuclear Phosphoproteins

A proteomics approach to understanding protein ubiquitination

Proteomic profiling of gamma-secretase substrates and mapping of substrate requirements

Isotope-targeted glycoproteomics (IsoTaG) analysis of sialylated N- and O-glycopeptides on an Orbitrap Fusion Tribrid using azido and alkynyl sugars

Host-centric Proteomics of Stool: A Novel Strategy Focused on intestinal Responses to the Gut Microbiota

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