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Hit identification and optimization in virtual screening: practical recommendations based on a critical literature analysis

Journal of medicinal chemistry, 2013-09, Vol.56 (17), p.6560-6572

2013

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Comparison of radii sets, entropy, QM methods, and sampling on MM-PBSA, MM-GBSA, and QM/MM-GBSA ligand binding energies of F. tularensis enoyl-ACP reductase (FabI)

Journal of computational chemistry, 2015-09, Vol.36 (25), p.1859-1873

2015

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Experimentally-derived fibroblast gene signatures identify molecular pathways associated with distinct subsets of systemic sclerosis patients in three independent cohorts

PloS one, 2015-01, Vol.10 (1), p.e0114017-e0114017

2015

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noncovalent class of papain-like protease/deubiquitinase inhibitors blocks SARS virus replication

Proceedings of the National Academy of Sciences - PNAS, 2008-10, Vol.105 (42), p.16119-16124

2008

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Fks1 and Fks2 Are Functionally Redundant but Differentially Regulated in Candida glabrata: Implications for Echinocandin Resistance

Antimicrobial Agents and Chemotherapy, 2012-12, Vol.56 (12), p.6304-6309

2012

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New Fks Hot Spot for Acquired Echinocandin Resistance in Saccharomyces cerevisiae and Its Contribution to Intrinsic Resistance of Scedosporium Species

Antimicrobial Agents and Chemotherapy, 2011-08, Vol.55 (8), p.3774-3781

2011

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The Association Between symptoms of Discomfort and signs in Dry Eye

The ocular surface, 2009-10, Vol.7 (4), p.199-211

Johnson, Michael E., PhD, FCQPTOM

2009

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Identification and design of novel small molecule inhibitors against MERS-CoV papain-like protease via high-throughput screening and molecular modeling

Bioorganic & medicinal chemistry, 2019-05, Vol.27 (10), p.1981-1989

2019

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A Gene Signature Predictive for Outcome in Advanced Ovarian Cancer Identifies a Survival Factor: Microfibril-Associated Glycoprotein 2

Cancer cell, 2009-12, Vol.16 (6), p.521-532

2009

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Microbiome dysbiosis is associated with disease duration and increased inflammatory gene expression in systemic sclerosis skin

Arthritis research & therapy, 2019-02, Vol.21 (1), p.49-11, Article 49

2019

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Topological and Mutational Analysis of Saccharomyces cerevisiae Fks1

Eukaryotic Cell, 2012-07, Vol.11 (7), p.952-960

2012

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Neurologic and Vascular Injuries Associated With Knee Ligament Injuries

The American journal of sports medicine, 2008-12, Vol.36 (12), p.2448-2462

2008

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Identification of Small Molecule Inhibitors against Staphylococcus aureus Dihydroorotase via HTS

International journal of molecular sciences, 2021-09, Vol.22 (18), p.9984

2021

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Changes in the tear film and ocular surface from dry eye syndrome

Progress in retinal and eye research, 2004-07, Vol.23 (4), p.449-474

2004

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Identification of novel drug scaffolds for inhibition of SARS-CoV 3-Chymotrypsin-like protease using virtual and high-throughput screenings

Bioorganic & medicinal chemistry, 2014-01, Vol.22 (1), p.167-177

2014

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Mapping the energy landscape of PROTAC-mediated protein-protein interactions

Computational and structural biotechnology journal, 2023-01, Vol.21, p.1885-1892

2023

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Ligand efficiency indices for an effective mapping of chemico-biological space: the concept of an atlas-like representation

Drug discovery today, 2010-10, Vol.15 (19), p.804-811

2010

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Discovery of a Novel and Potent Class of F. tularensis Enoyl-Reductase (FabI) Inhibitors by Molecular Shape and Electrostatic Matching

Journal of medicinal chemistry, 2012-01, Vol.55 (1), p.268-279

2012

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Mitochondrial injury and caspase activation by the local anesthetic lidocaine

Anesthesiology (Philadelphia), 2004-11, Vol.101 (5), p.1184-1194

2004

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Increased HLA-DMB Expression in the Tumor Epithelium Is Associated with Increased CTL Infiltration and Improved Prognosis in Advanced-Stage Serous Ovarian Cancer

Clinical cancer research, 2008-12, Vol.14 (23), p.7667-7673

2008

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Whole Genome Oligonucleotide-Based Array Comparative Genomic Hybridization Analysis Identified Fibroblast Growth Factor 1 As a Prognostic Marker for Advanced-Stage Serous Ovarian Adenocarcinomas

Journal of clinical oncology, 2007-06, Vol.25 (16), p.2281-2287

2007

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KxWO Is a Novel Ferroelectric Nanomaterial for Application as a Room Temperature Acetone Sensor

Nanomaterials (Basel, Switzerland), 2020-01, Vol.10 (2), p.225

2020

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Structure-Based Design, Synthesis, and Biological Evaluation of a Series of Novel and Reversible Inhibitors for the Severe Acute Respiratory Syndrome−Coronavirus Papain-Like Protease

Journal of medicinal chemistry, 2009-08, Vol.52 (16), p.5228-5240

2009

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Agriculture and AfCFTA: NTM reductions increase intra‐Africa trade

Agricultural economics, 2024-03, Vol.55 (2), p.200-222

2024

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Inhibition of MptpB phosphatase from Mycobacterium tuberculosis impairs mycobacterial survival in macrophages

Journal of antimicrobial chemotherapy, 2009-05, Vol.63 (5), p.928-936

2009

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Hit identification and optimization in virtual screening: practical recommendations based on a critical literature analysis

Comparison of radii sets, entropy, QM methods, and sampling on MM-PBSA, MM-GBSA, and QM/MM-GBSA ligand binding energies of F. tularensis enoyl-ACP reductase (FabI)

Experimentally-derived fibroblast gene signatures identify molecular pathways associated with distinct subsets of systemic sclerosis patients in three independent cohorts

noncovalent class of papain-like protease/deubiquitinase inhibitors blocks SARS virus replication

Fks1 and Fks2 Are Functionally Redundant but Differentially Regulated in Candida glabrata: Implications for Echinocandin Resistance

New Fks Hot Spot for Acquired Echinocandin Resistance in Saccharomyces cerevisiae and Its Contribution to Intrinsic Resistance of Scedosporium Species

The Association Between symptoms of Discomfort and signs in Dry Eye

Identification and design of novel small molecule inhibitors against MERS-CoV papain-like protease via high-throughput screening and molecular modeling

A Gene Signature Predictive for Outcome in Advanced Ovarian Cancer Identifies a Survival Factor: Microfibril-Associated Glycoprotein 2

Microbiome dysbiosis is associated with disease duration and increased inflammatory gene expression in systemic sclerosis skin

Topological and Mutational Analysis of Saccharomyces cerevisiae Fks1

Neurologic and Vascular Injuries Associated With Knee Ligament Injuries

Identification of Small Molecule Inhibitors against Staphylococcus aureus Dihydroorotase via HTS

Changes in the tear film and ocular surface from dry eye syndrome

Identification of novel drug scaffolds for inhibition of SARS-CoV 3-Chymotrypsin-like protease using virtual and high-throughput screenings

Mapping the energy landscape of PROTAC-mediated protein-protein interactions

Ligand efficiency indices for an effective mapping of chemico-biological space: the concept of an atlas-like representation

Discovery of a Novel and Potent Class of F. tularensis Enoyl-Reductase (FabI) Inhibitors by Molecular Shape and Electrostatic Matching

Mitochondrial injury and caspase activation by the local anesthetic lidocaine

Increased HLA-DMB Expression in the Tumor Epithelium Is Associated with Increased CTL Infiltration and Improved Prognosis in Advanced-Stage Serous Ovarian Cancer

Whole Genome Oligonucleotide-Based Array Comparative Genomic Hybridization Analysis Identified Fibroblast Growth Factor 1 As a Prognostic Marker for Advanced-Stage Serous Ovarian Adenocarcinomas

KxWO Is a Novel Ferroelectric Nanomaterial for Application as a Room Temperature Acetone Sensor

Structure-Based Design, Synthesis, and Biological Evaluation of a Series of Novel and Reversible Inhibitors for the Severe Acute Respiratory Syndrome−Coronavirus Papain-Like Protease

Agriculture and AfCFTA: NTM reductions increase intra‐Africa trade

Inhibition of MptpB phosphatase from Mycobacterium tuberculosis impairs mycobacterial survival in macrophages

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