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Signals for pre-mRNA cleavage and polyadenylation

Wiley interdisciplinary reviews. RNA, 2012-05, Vol.3 (3), p.385-396

2012

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Macrophage differentiation is marked by increased abundance of the mRNA 3' end processing machinery, altered poly(A) site usage, and sensitivity to the level of CstF64

Frontiers in immunology, 2023-01, Vol.14, p.1091403

2023

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Gene-specific RNA polymerase II phosphorylation and the CTD code

Nature structural & molecular biology, 2010-10, Vol.17 (10), p.1279

2010

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Loss of Krüppel-like factor 9 deregulates both physiological gene expression and development

Scientific reports, 2023-07, Vol.13 (1), p.12239-13, Article 12239

2023

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A customized and versatile high-density genotyping array for the mouse

Nature methods, 2009-09, Vol.6 (9), p.663-666

2009

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Global changes in processing of mRNA 3' untranslated regions characterize clinically distinct cancer subtypes

Cancer research (Chicago, Ill.), 2009-12, Vol.69 (24), p.9422-9430

2009

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Differential effects of RASA3 mutations on hematopoiesis are profoundly influenced by genetic background and molecular variant

PLoS genetics, 2020-12, Vol.16 (12), p.e1008857-e1008857

2020

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Position-dependent motif characterization using non-negative matrix factorization

Bioinformatics, 2008-12, Vol.24 (23), p.2684-2690

2008

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Genomic data analysis workflows for tumors from patient-derived xenografts (PDXs): challenges and guidelines

BMC medical genomics, 2019-07, Vol.12 (1), p.92-19, Article 92

2019

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The recombinational anatomy of a mouse chromosome

PLoS genetics, 2008-07, Vol.4 (7), p.e1000119-e1000119

2008

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Ipa1 Is an RNA Polymerase II Elongation Factor that Facilitates Termination by Maintaining Levels of the Poly(A) Site Endonuclease Ysh1

Cell reports (Cambridge), 2020-08, Vol.32 (5), p.108031-108031, Article 108031

2020

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Ipa1 Is an RNA Polymerase II Elongation Factor that Facilitates Termination by Maintaining Levels of the Poly(A) Site Endonuclease Ysh1

Cell reports (Cambridge), 2019-02, Vol.26 (7), p.1919-1933.e5

2019

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Cracking the egg: molecular dynamics and evolutionary aspects of the transition from the fully grown oocyte to embryo

Genes & development, 2006-10, Vol.20 (19), p.2713-2727

2006

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Systematic variation in mRNA 3'-processing signals during mouse spermatogenesis

Nucleic acids research, 2007-01, Vol.35 (1), p.234

2007

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Temporal dynamics of the developing lung transcriptome in three common inbred strains of laboratory mice reveals multiple stages of postnatal alveolar development

PeerJ (San Francisco, CA), 2016-08, Vol.4, p.e2318-e2318, Article e2318

2016

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Probe-level analysis of expression microarrays characterizes isoform-specific degradation during mouse oocyte maturation

PloS one, 2009-10, Vol.4 (10), p.e7479-e7479

2009

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Factors that influence response classifications in chemotherapy treated patient-derived xenografts (PDX)

PeerJ (San Francisco, CA), 2019-03, Vol.7, p.e6586, Article e6586

2019

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A cloud-based training module for efficient de novo transcriptome assembly using Nextflow and Google cloud

Briefings in bioinformatics, 2024-05, Vol.25 (4)

2024

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Quantitative comparison of EST libraries requires compensation for systematic biases in cDNA generation

BMC bioinformatics, 2006-02, Vol.7 (1), p.77-77, Article 77

2006

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A multispecies comparison of the metazoan 3'-processing downstream elements and the CstF-64 RNA recognition motif

BMC genomics, 2006-03, Vol.7 (1), p.55-55, Article 55

2006

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In silico Detection of Control Signals: mRNA 3′-end-Processing Sequences in Diverse Species

Proceedings of the National Academy of Sciences - PNAS, 1999-11, Vol.96 (24), p.14055-14060

1999

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S100A4 Is a Biomarker and Regulator of Glioma Stem Cells That Is Critical for Mesenchymal Transition in Glioblastoma

Cancer research (Chicago, Ill.), 2017-10, Vol.77 (19), p.5360-5373

2017

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Patterns of recombination activity on mouse chromosome 11 revealed by high resolution mapping

PloS one, 2010-12, Vol.5 (12), p.e15340-e15340

2010

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Reference Trait Analysis Reveals Correlations Between Gene Expression and Quantitative Traits in Disjoint Samples

Genetics (Austin), 2019-07, Vol.212 (3), p.919-929

2019

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An expanded mouse testis transcriptome and mass spectrometry defines novel proteins

Reproduction (Cambridge, England), 2020-01, Vol.159 (1), p.15-26

2020

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Signals for pre-mRNA cleavage and polyadenylation

Macrophage differentiation is marked by increased abundance of the mRNA 3' end processing machinery, altered poly(A) site usage, and sensitivity to the level of CstF64

Gene-specific RNA polymerase II phosphorylation and the CTD code

Loss of Krüppel-like factor 9 deregulates both physiological gene expression and development

A customized and versatile high-density genotyping array for the mouse

Global changes in processing of mRNA 3' untranslated regions characterize clinically distinct cancer subtypes

Differential effects of RASA3 mutations on hematopoiesis are profoundly influenced by genetic background and molecular variant

Position-dependent motif characterization using non-negative matrix factorization

Genomic data analysis workflows for tumors from patient-derived xenografts (PDXs): challenges and guidelines

The recombinational anatomy of a mouse chromosome

Ipa1 Is an RNA Polymerase II Elongation Factor that Facilitates Termination by Maintaining Levels of the Poly(A) Site Endonuclease Ysh1

Ipa1 Is an RNA Polymerase II Elongation Factor that Facilitates Termination by Maintaining Levels of the Poly(A) Site Endonuclease Ysh1

Cracking the egg: molecular dynamics and evolutionary aspects of the transition from the fully grown oocyte to embryo

Systematic variation in mRNA 3'-processing signals during mouse spermatogenesis

Temporal dynamics of the developing lung transcriptome in three common inbred strains of laboratory mice reveals multiple stages of postnatal alveolar development

Probe-level analysis of expression microarrays characterizes isoform-specific degradation during mouse oocyte maturation

Factors that influence response classifications in chemotherapy treated patient-derived xenografts (PDX)

A cloud-based training module for efficient de novo transcriptome assembly using Nextflow and Google cloud

Quantitative comparison of EST libraries requires compensation for systematic biases in cDNA generation

A multispecies comparison of the metazoan 3'-processing downstream elements and the CstF-64 RNA recognition motif

In silico Detection of Control Signals: mRNA 3′-end-Processing Sequences in Diverse Species

S100A4 Is a Biomarker and Regulator of Glioma Stem Cells That Is Critical for Mesenchymal Transition in Glioblastoma

Patterns of recombination activity on mouse chromosome 11 revealed by high resolution mapping

Reference Trait Analysis Reveals Correlations Between Gene Expression and Quantitative Traits in Disjoint Samples

An expanded mouse testis transcriptome and mass spectrometry defines novel proteins

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