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Moltemplate: A Tool for Coarse-Grained Modeling of Complex Biological Matter and Soft Condensed Matter Physics

Journal of molecular biology, 2021-05, Vol.433 (11), p.166841-166841, Article 166841

2021

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Chromatin extrusion explains key features of loop and domain formation in wild-type and engineered genomes

Proceedings of the National Academy of Sciences - PNAS, 2015-11, Vol.112 (47), p.E6456-E6465

2015

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Short FtsZ filaments can drive asymmetric cell envelope constriction at the onset of bacterial cytokinesis

The EMBO journal, 2017-06, Vol.36 (11), p.1577-1589

2017

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Uncharacterized Bacterial Structures Revealed by Electron Cryotomography

Journal of bacteriology, 2017-09, Vol.199 (17)

2017

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Integrative structural modelling and visualisation of a cellular organelle

QRB discovery, 2022, Vol.3, p.e11, Article e11

2022

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Structural diversity of dimers of the Alzheimer amyloid-beta(25-35) peptide and polymorphism of the resulting fibrils

Physical chemistry chemical physics : PCCP, 2010-04, Vol.12 (14), p.3622

2010

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Reconciling theories of chaperonin accelerated folding with experimental evidence

Cellular and molecular life sciences : CMLS, 2010-01, Vol.67 (2), p.255-276

2010

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Bdellovibrio predation cycle characterized at nanometre-scale resolution with cryo-electron tomography

Nature microbiology, 2023-07, Vol.8 (7), p.1267-1279

2023

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Assisted Peptide Folding by Surface Pattern Recognition

Biophysical journal, 2011-03, Vol.100 (5), p.1306-1315

2011

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Relative stability of de novo four–helix bundle proteins: Insights from coarse grained molecular simulations

Protein science, 2011-05, Vol.20 (5), p.818-826

2011

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Cooperativity, Smooth Energy Landscapes and the Origins of Topology-dependent Protein Folding Rates

Journal of molecular biology, 2003-02, Vol.326 (1), p.247-253

2003

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The effect of surface tethering on the folding of the src-SH3 protein domain

Physical biology, 2009-02, Vol.6 (1), p.015004-015004

2009

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MINRMS: an efficient algorithm for determining protein structure similarity using root-mean-squared-distance

Bioinformatics (Oxford, England), 2003-03, Vol.19 (5), p.625-634

2003

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Moltemplate a Coarse-Grained Model Assembly Tool

Biophysical journal, 2013-01, Vol.104 (2), p.169a-169a

2013

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Structural diversity of dimers of the Alzheimer amyloid-β(25-35) peptide and polymorphism of the resulting fibrils: Biomolecular structures: from isolated molecules to living cells

Physical chemistry chemical physics : PCCP, 2010, Vol.12 (14), p.3622-3629

2010

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MINRMS: an efficient algorithm for determining protein structuresimilarity using root-mean-squared-distance

Bioinformatics, 2003-03, Vol.19 (5), p.625-634

2003

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Exploring the mechanisms used by promiscuous chaperones to assist protein folding in the cell

Jewett, Andrew I

2006

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Outcomes of Small Renal Mass Needle Core Biopsy, Nondiagnostic Percutaneous Biopsy, and the Role of Repeat Biopsy

European urology, 2011-09, Vol.60 (3), p.578-584

2011

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Active Surveillance of Small Renal Masses: Progression Patterns of Early Stage Kidney Cancer

European urology, 2011-07, Vol.60 (1), p.39-44

2011

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Renal Tumor Biopsy for Small Renal Masses: A Single-center 13-year Experience

European urology, 2015-12, Vol.68 (6), p.1007-1013

2015

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Techniques, Safety and Accuracy of Sampling of Renal Tumors by Fine Needle Aspiration and Core Biopsy

The Journal of urology, 2007-08, Vol.178 (2), p.379-386

2007

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Contemporary Results of Percutaneous Biopsy of 100 Small Renal Masses: A Single Center Experience

The Journal of urology, 2008-12, Vol.180 (6), p.2333-2337

2008

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Expanding the limits of the second genetic code with ribozymes

Nature communications, 2019-11, Vol.10 (1), p.5097-12, Article 5097

2019

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Active Surveillance for Renal Neoplasms with Oncocytic Features is Safe

The Journal of urology, 2016-03, Vol.195 (3), p.581-587

2016

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Lactate dehydrogenase A is a potential prognostic marker in clear cell renal cell carcinoma

Molecular cancer, 2014-05, Vol.13 (1), p.101-101, Article 101

2014

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Moltemplate: A Tool for Coarse-Grained Modeling of Complex Biological Matter and Soft Condensed Matter Physics

Chromatin extrusion explains key features of loop and domain formation in wild-type and engineered genomes

Short FtsZ filaments can drive asymmetric cell envelope constriction at the onset of bacterial cytokinesis

Uncharacterized Bacterial Structures Revealed by Electron Cryotomography

Integrative structural modelling and visualisation of a cellular organelle

Structural diversity of dimers of the Alzheimer amyloid-beta(25-35) peptide and polymorphism of the resulting fibrils

Reconciling theories of chaperonin accelerated folding with experimental evidence

Bdellovibrio predation cycle characterized at nanometre-scale resolution with cryo-electron tomography

Assisted Peptide Folding by Surface Pattern Recognition

Relative stability of de novo four–helix bundle proteins: Insights from coarse grained molecular simulations

Cooperativity, Smooth Energy Landscapes and the Origins of Topology-dependent Protein Folding Rates

The effect of surface tethering on the folding of the src-SH3 protein domain

MINRMS: an efficient algorithm for determining protein structure similarity using root-mean-squared-distance

Moltemplate a Coarse-Grained Model Assembly Tool

Structural diversity of dimers of the Alzheimer amyloid-β(25-35) peptide and polymorphism of the resulting fibrils: Biomolecular structures: from isolated molecules to living cells

MINRMS: an efficient algorithm for determining protein structuresimilarity using root-mean-squared-distance

Exploring the mechanisms used by promiscuous chaperones to assist protein folding in the cell

Outcomes of Small Renal Mass Needle Core Biopsy, Nondiagnostic Percutaneous Biopsy, and the Role of Repeat Biopsy

Active Surveillance of Small Renal Masses: Progression Patterns of Early Stage Kidney Cancer

Renal Tumor Biopsy for Small Renal Masses: A Single-center 13-year Experience

Techniques, Safety and Accuracy of Sampling of Renal Tumors by Fine Needle Aspiration and Core Biopsy

Contemporary Results of Percutaneous Biopsy of 100 Small Renal Masses: A Single Center Experience

Expanding the limits of the second genetic code with ribozymes

Active Surveillance for Renal Neoplasms with Oncocytic Features is Safe

Lactate dehydrogenase A is a potential prognostic marker in clear cell renal cell carcinoma

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