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Structural adaptations in the interaction of EcoRI endonuclease with methylated GAATTC sites

The EMBO journal, 1996-06, Vol.15 (11), p.2870-2882

1996

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Structural and Thermodynamic Strategies for Site-Specific DNA Binding Proteins

Structure (London), 2000-10, Vol.8 (10), p.1015-1023

2000

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Protein-DNA recognition complexes: Conservation of structure and binding energy in the transition state

BIOPOLYM, 1997, Vol.44 (2), p.153-180

Jen-Jacobson, Linda

1997

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Facilitated Distortion of the DNA Site Enhances EcoRI Endonuclease-DNA Recognition

Proceedings of the National Academy of Sciences - PNAS, 1993-08, Vol.90 (16), p.7548-7552

1993

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Ultraviolet Footprinting'' Accurately Maps Sequence-Specific Contacts and DNA Kinking in the EcoRI Endonuclease-DNA Complex

Proceedings of the National Academy of Sciences - PNAS, 1988-09, Vol.85 (17), p.6247-6251

1988

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Assay of restriction endonucleases using oligonucleotides

Methods in molecular biology (Clifton, N.J.), 2001, Vol.148, p.465

2001

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Mechanisms of Coupling between DNA Recognition Specificity and Catalysis in EcoRI Endonuclease

Structure (London), 2004-10, Vol.12 (10), p.1775-1788

2004

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Recognition of the Pro-mutagenic Base Uracil by Family B DNA Polymerases from Archaea

Journal of molecular biology, 2004-03, Vol.337 (3), p.621-634

2004

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Coordinate ion pair formation between EcoRI endonuclease and DNA

The Journal of biological chemistry, 1983-12, Vol.258 (23), p.14638-14646

1983

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Stereoselective interaction with chiral phosphorothioates at the central DNA kink of the EcoRI endonuclease-GAATTC complex

The Journal of biological chemistry, 1992-12, Vol.267 (34), p.24810-24818

1992

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The energetics of the interaction of BamHI endonuclease with its recognition site GGATCC

Journal of molecular biology, 2001-03, Vol.307 (2), p.619-636

2001

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Specific binding by EcoRV endonuclease to its DNA recognition site GATATC

Journal of molecular biology, 1997-05, Vol.269 (1), p.82-101

1997

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Thermodynamic and Kinetic Basis for the Relaxed DNA Sequence Specificity of “Promiscuous” Mutant EcoRI Endonucleases

Journal of molecular biology, 2005-04, Vol.348 (2), p.307-324

2005

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The Energetic Basis of Specificity in the Eco RI Endonuclease-DNA Interaction

Science (American Association for the Advancement of Science), 1990-11, Vol.250 (4982), p.776-786

1990

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[14] Structural-perturbation approaches to thermodynamics of site-specific protein—DNA interactions

Methods in Enzymology, 1995, Vol.259, p.305-344

Jen-Jacobson, Linda

1995

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Thermodynamic Parameters of Specific and Nonspecific Protein-DNA Binding

Supramolecular chemistry, 2000-10, Vol.12 (2), p.143-160

2000

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Control of protein synthesis in Escherichia coli: strain differences in control of translational initiation after energy source shift-down

Journal of Bacteriology, 1980-06, Vol.142 (3), p.888-898

1980

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Solution Conformation of EcoRI Restriction Endonuclease Changes upon Binding of Cognate DNA and Mg2+ Cofactor

Biochemistry (Easton), 2001-01, Vol.40 (3), p.683-692

2001

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Effect of base analog substitutions in the specific GATC site on binding and methylation of oligonucleotide duplexes by the bacteriophage T4 Dam DNA-[N6-adenine] methyltransferase

Nucleic acids research, 1999-02, Vol.27 (4), p.1135-1144

1999

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N-Termini of EcoRI Restriction Endonuclease Dimer Are in Close Proximity on the Protein Surface

Biochemistry (Easton), 1998-11, Vol.37 (44), p.15457-15465

1998

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Chiral Phosphorothioates as Probes of Protein Interactions with Individual DNA Phosphoryl Oxygens: Essential Interactions of EcoRI Endonuclease with the Phosphate at pGAATTC

Biochemistry (Easton), 1996-07, Vol.35 (27), p.8846-8854

1996

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Identification of a Putative Structural Gene for Cathepsin D in Caenorhabditis elegans

Genetics (Austin), 1988-06, Vol.119 (2), p.355-363

1988

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The enfolding arms of EcoRI endonuclease: Role in DNA binding and cleavage

Cell, 1986-05, Vol.45 (4), p.619-629

1986

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Kinked DNA in crystalline complex with EcoRI endonuclease

Nature (London), 1984-01, Vol.309 (5966), p.327-331

1984

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The Energetics of the Interaction of Bam HI Endonuclease with its Recognition Site GGATCC

Journal of molecular biology, 2001-03, Vol.307 (2), p.619-636

2001

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Structural adaptations in the interaction of EcoRI endonuclease with methylated GAATTC sites

Structural and Thermodynamic Strategies for Site-Specific DNA Binding Proteins

Protein-DNA recognition complexes: Conservation of structure and binding energy in the transition state

Facilitated Distortion of the DNA Site Enhances EcoRI Endonuclease-DNA Recognition

Ultraviolet Footprinting'' Accurately Maps Sequence-Specific Contacts and DNA Kinking in the EcoRI Endonuclease-DNA Complex

Assay of restriction endonucleases using oligonucleotides

Mechanisms of Coupling between DNA Recognition Specificity and Catalysis in EcoRI Endonuclease

Recognition of the Pro-mutagenic Base Uracil by Family B DNA Polymerases from Archaea

Coordinate ion pair formation between EcoRI endonuclease and DNA

Stereoselective interaction with chiral phosphorothioates at the central DNA kink of the EcoRI endonuclease-GAATTC complex

The energetics of the interaction of BamHI endonuclease with its recognition site GGATCC

Specific binding by EcoRV endonuclease to its DNA recognition site GATATC

Thermodynamic and Kinetic Basis for the Relaxed DNA Sequence Specificity of “Promiscuous” Mutant EcoRI Endonucleases

The Energetic Basis of Specificity in the Eco RI Endonuclease-DNA Interaction

[14] Structural-perturbation approaches to thermodynamics of site-specific protein—DNA interactions

Thermodynamic Parameters of Specific and Nonspecific Protein-DNA Binding

Control of protein synthesis in Escherichia coli: strain differences in control of translational initiation after energy source shift-down

Solution Conformation of EcoRI Restriction Endonuclease Changes upon Binding of Cognate DNA and Mg2+ Cofactor

Effect of base analog substitutions in the specific GATC site on binding and methylation of oligonucleotide duplexes by the bacteriophage T4 Dam DNA-[N6-adenine] methyltransferase

N-Termini of EcoRI Restriction Endonuclease Dimer Are in Close Proximity on the Protein Surface

Chiral Phosphorothioates as Probes of Protein Interactions with Individual DNA Phosphoryl Oxygens: Essential Interactions of EcoRI Endonuclease with the Phosphate at pGAATTC

Identification of a Putative Structural Gene for Cathepsin D in Caenorhabditis elegans

The enfolding arms of EcoRI endonuclease: Role in DNA binding and cleavage

Kinked DNA in crystalline complex with EcoRI endonuclease

The Energetics of the Interaction of Bam HI Endonuclease with its Recognition Site GGATCC

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