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PoDCall: positive droplet calling and normalization of droplet digital PCR DNA methylation data

Bioinformatics (Oxford, England), 2023-01, Vol.39 (1)

2023

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Should we abandon the t-test in the analysis of gene expression microarray data: a comparison of variance modeling strategies

PloS one, 2010-09, Vol.5 (9), p.e12336-e12336

2010

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Multiregional transcriptomics identifies congruent consensus subtypes with prognostic value beyond tumor heterogeneity of colorectal cancer

Nature communications, 2024-05, Vol.15 (1), p.4342-4342, Article 4342

2024

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CpG island methylator phenotype identifies high risk patients among microsatellite stable BRAF mutated colorectal cancers

International journal of cancer, 2017-09, Vol.141 (5), p.967-976

2017

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Evaluation of commercial kits for isolation and bisulfite conversion of circulating cell-free tumor DNA from blood

Clinical epigenetics, 2023-09, Vol.15 (1), p.1-14, Article 151

2023

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Improved prognostication of glioblastoma beyond molecular subtyping by transcriptional profiling of the tumor microenvironment

Molecular oncology, 2020-05, Vol.14 (5), p.1016-1027

2020

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A robust internal control for high-precision DNA methylation analyses by droplet digital PCR

Clinical epigenetics, 2018-02, Vol.10 (1), p.24-24, Article 24

2018

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Prognostic relevance of an epigenetic biomarker panel in sentinel lymph nodes from colon cancer patients

Clinical epigenetics, 2017-09, Vol.9 (1), p.97-97, Article 97

2017

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A comprehensive evaluation of normalization methods for Illumina high-throughput RNA sequencing data analysis

Briefings in bioinformatics, 2013-11, Vol.14 (6), p.671-683

2013

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Human blood BDCA-1 dendritic cells differentiate into Langerhans-like cells with thymic stromal lymphopoietin and TGF-β

Blood, 2014-10, Vol.124 (15), p.2411-2420

2014

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Microbe-host interplay in atopic dermatitis and psoriasis

Nature communications, 2019-10, Vol.10 (1), p.4703-15, Article 4703

2019

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Abstract 5387: Droplet digital PCR for sensitive quantification of DNA methylation in non-invasive material: Development of a robust control

Cancer research (Chicago, Ill.), 2017-07, Vol.77 (13_Supplement), p.5387-5387

2017

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Spatial analysis and CD25-expression identify regulatory T cells as predictors of a poor prognosis in colorectal cancer

Modern pathology, 2022-09, Vol.35 (9), p.1236-1246

2022

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Early and accurate detection of cholangiocarcinoma in patients with primary sclerosing cholangitis by methylation markers in bile

Hepatology (Baltimore, Md.), 2022-01, Vol.75 (1), p.59-73

2022

Volltextzugriff (PDF)

Distinct longitudinal patterns of urine tumor DNA in patients undergoing surveillance for bladder cancer

Molecular oncology, 2024-05

2024

Volltextzugriff (PDF)

THU-006-Aberrant DNA methylation in bile accurately detects cholangiocarcinoma in patients with primary sclerosing cholangitis

Journal of hepatology, 2019-04, Vol.70 (1), p.e163-e163

2019

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Multiregional assessment of CIMP in primary colorectal cancers: Phenotype concordance but marker variability

International journal of cancer, 2021-04, Vol.148 (7), p.1652-1657

2021

Volltextzugriff (PDF)

Breast Cancer Cell-Derived GM-CSF Licenses Regulatory Th2 Induction by Plasmacytoid Predendritic Cells in Aggressive Disease Subtypes

Cancer research (Chicago, Ill.), 2015-07, Vol.75 (14), p.2775-2787

2015

Volltextzugriff (PDF)

Abstract 4540: Multiregional transcriptomics of colorectal cancers define prognostic features less vulnerable to tumor heterogeneity

Cancer research (Chicago, Ill.), 2023-04, Vol.83 (7_Supplement), p.4540-4540

2023

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Experimental factors affecting the robustness of DNA methylation analysis

Scientific reports, 2016-09, Vol.6 (1), p.33936-33936, Article 33936

2016

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BladMetrix: a novel urine DNA methylation test with high accuracy for detection of bladder cancer in hematuria patients

Clinical epigenetics, 2022-09, Vol.14 (1), p.1-115, Article 115

2022

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Targeted genetic and epigenetic profiling of esophageal adenocarcinomas and non-dysplastic Barrett's esophagus

Clinical epigenetics, 2022-06, Vol.14 (1), p.77-77, Article 77

2022

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Multiple testing in large-scale genetic studies

Methods in molecular biology (Clifton, N.J.), 2012, Vol.888, p.213

2012

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Les auteurs

Médecine générale pour le praticien, 2022, p.xi-xiii

2022

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PoDCall: positive droplet calling and normalization of droplet digital PCR DNA methylation data

Should we abandon the t-test in the analysis of gene expression microarray data: a comparison of variance modeling strategies

Multiregional transcriptomics identifies congruent consensus subtypes with prognostic value beyond tumor heterogeneity of colorectal cancer

CpG island methylator phenotype identifies high risk patients among microsatellite stable BRAF mutated colorectal cancers

Evaluation of commercial kits for isolation and bisulfite conversion of circulating cell-free tumor DNA from blood

Improved prognostication of glioblastoma beyond molecular subtyping by transcriptional profiling of the tumor microenvironment

A robust internal control for high-precision DNA methylation analyses by droplet digital PCR

Prognostic relevance of an epigenetic biomarker panel in sentinel lymph nodes from colon cancer patients

A comprehensive evaluation of normalization methods for Illumina high-throughput RNA sequencing data analysis

Human blood BDCA-1 dendritic cells differentiate into Langerhans-like cells with thymic stromal lymphopoietin and TGF-β

Microbe-host interplay in atopic dermatitis and psoriasis

Abstract 5387: Droplet digital PCR for sensitive quantification of DNA methylation in non-invasive material: Development of a robust control

Spatial analysis and CD25-expression identify regulatory T cells as predictors of a poor prognosis in colorectal cancer

Early and accurate detection of cholangiocarcinoma in patients with primary sclerosing cholangitis by methylation markers in bile

Distinct longitudinal patterns of urine tumor DNA in patients undergoing surveillance for bladder cancer

THU-006-Aberrant DNA methylation in bile accurately detects cholangiocarcinoma in patients with primary sclerosing cholangitis

Multiregional assessment of CIMP in primary colorectal cancers: Phenotype concordance but marker variability

Breast Cancer Cell-Derived GM-CSF Licenses Regulatory Th2 Induction by Plasmacytoid Predendritic Cells in Aggressive Disease Subtypes

Abstract 4540: Multiregional transcriptomics of colorectal cancers define prognostic features less vulnerable to tumor heterogeneity

Experimental factors affecting the robustness of DNA methylation analysis

BladMetrix: a novel urine DNA methylation test with high accuracy for detection of bladder cancer in hematuria patients

Targeted genetic and epigenetic profiling of esophageal adenocarcinomas and non-dysplastic Barrett's esophagus

Multiple testing in large-scale genetic studies

Les auteurs

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