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Candidate silencer elements for the human and mouse genomes

Nature communications, 2020-02, Vol.11 (1), p.1061-1061, Article 1061

2020

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Metabolomic studies of human gastric cancer:Review

World journal of gastroenterology : WJG, 2014-07, Vol.20 (25), p.8092-8101

2014

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Single-cell analysis of transcriptome and DNA methylome in human oocyte maturation

PloS one, 2020-11, Vol.15 (11), p.e0241698-e0241698

2020

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Dynamics of regulatory networks in gastrin-treated adenocarcinoma cells

PloS one, 2014-01, Vol.9 (1), p.e78349

2014

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Epigenomic Landscapes of hESC-Derived Neural Rosettes: Modeling Neural Tube Formation and Diseases

Cell reports (Cambridge), 2017-08, Vol.20 (6), p.1448-1462

2017

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Enhancer Chromatin and 3D Genome Architecture Changes from Naive to Primed Human Embryonic Stem Cell States

Stem cell reports, 2019-05, Vol.12 (5), p.1129-1144

2019

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Methylome Analysis of Human Bone Marrow MSCs Reveals Extensive Age- and Culture-Induced Changes at Distal Regulatory Elements

Stem cell reports, 2017-09, Vol.9 (3), p.999-1015

2017

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Protective mechanisms of allergic asthma in COVID-19

Journal of allergy and clinical immunology, 2023-10, Vol.152 (4), p.873-875

2023

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Constrained Fourier estimation of short-term time-series gene expression data reduces noise and improves clustering and gene regulatory network predictions

BMC bioinformatics, 2022-08, Vol.23 (1), p.330-330, Article 330

2022

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Type 2 inflammation reduces SARS-CoV-2 replication in the airway epithelium in allergic asthma through functional alteration of ciliated epithelial cells

Journal of allergy and clinical immunology, 2023-07, Vol.152 (1), p.56-67

2023

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Reconstruction of temporal activity of microRNAs from gene expression data in breast cancer cell line

BMC genomics, 2015-12, Vol.16 (1074), p.1077-1077, Article 1077

2015

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Iterative sub-network component analysis enables reconstruction of large scale genetic networks

BMC bioinformatics, 2015-11, Vol.16 (358), p.366-366, Article 366

2015

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DNA methylation dynamics during embryonic development and postnatal maturation of the mouse auditory sensory epithelium

Scientific reports, 2018-11, Vol.8 (1), p.17348-15, Article 17348

2018

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Using WGCNA (weighted gene co-expression network analysis) to identify the hub genes of skin hair follicle development in fetus stage of Inner Mongolia cashmere goat

PloS one, 2020-12, Vol.15 (12), p.e0243507-e0243507

2020

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Hierarchical regulation of autophagy during adipocyte differentiation

PloS one, 2022-01, Vol.17 (1), p.e0250865-e0250865

2022

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Genome-scale cold stress response regulatory networks in ten Arabidopsis thalianaecotypes

BMC genomics, 2013-10, Vol.14 (1), Article 722

2013

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A Noise Removal Algorithm for Time Series Microarray Data

Progress in Artificial Intelligence, p.152-162

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ISNCA: A new iterative approach for constrained matrix factorization methods

Journal of process control, 2017-12, Vol.60, p.24-33

2017

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Genome-scale cold stress response regulatory networks in ten Arabidopsis thaliana ecotypes

BMC genomics, 2013-10, Vol.14 (1), p.722-722

2013

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Transcriptional regulatory networks in Arabidopsis thaliana during single and combined stresses

Nucleic acids research, 2016-04, Vol.44 (7), p.3147

2016

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Nasal and blood transcriptomic pathways underpinning the clinical response to grass pollen immunotherapy

Journal of allergy and clinical immunology, 2023-11, Vol.152 (5), p.1247-1260

2023

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Genome scale transcriptional response diversity among ten ecotypes of Arabidopsis thaliana during heat stress

Frontiers in plant science, 2013-12, Vol.4, p.532

2013

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Relationship of Heterologous Virus Responses and Outcomes in Hospitalized COVID-19 Patients

The Journal of immunology (1950), 2023-10, Vol.211 (8), p.1224

2023

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Features of acute COVID-19 associated with post-acute sequelae of SARS-CoV-2 phenotypes: results from the IMPACC study

Nature communications, 2024-01, Vol.15 (1), p.216-216, Article 216

2024

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Candidate silencer elements for the human and mouse genomes

Metabolomic studies of human gastric cancer:Review

Single-cell analysis of transcriptome and DNA methylome in human oocyte maturation

Dynamics of regulatory networks in gastrin-treated adenocarcinoma cells

Epigenomic Landscapes of hESC-Derived Neural Rosettes: Modeling Neural Tube Formation and Diseases

Enhancer Chromatin and 3D Genome Architecture Changes from Naive to Primed Human Embryonic Stem Cell States

Methylome Analysis of Human Bone Marrow MSCs Reveals Extensive Age- and Culture-Induced Changes at Distal Regulatory Elements

Protective mechanisms of allergic asthma in COVID-19

Constrained Fourier estimation of short-term time-series gene expression data reduces noise and improves clustering and gene regulatory network predictions

Type 2 inflammation reduces SARS-CoV-2 replication in the airway epithelium in allergic asthma through functional alteration of ciliated epithelial cells

Reconstruction of temporal activity of microRNAs from gene expression data in breast cancer cell line

Iterative sub-network component analysis enables reconstruction of large scale genetic networks

DNA methylation dynamics during embryonic development and postnatal maturation of the mouse auditory sensory epithelium

Using WGCNA (weighted gene co-expression network analysis) to identify the hub genes of skin hair follicle development in fetus stage of Inner Mongolia cashmere goat

Hierarchical regulation of autophagy during adipocyte differentiation

Genome-scale cold stress response regulatory networks in ten Arabidopsis thalianaecotypes

A Noise Removal Algorithm for Time Series Microarray Data

ISNCA: A new iterative approach for constrained matrix factorization methods

Genome-scale cold stress response regulatory networks in ten Arabidopsis thaliana ecotypes

Transcriptional regulatory networks in Arabidopsis thaliana during single and combined stresses

Nasal and blood transcriptomic pathways underpinning the clinical response to grass pollen immunotherapy

Genome scale transcriptional response diversity among ten ecotypes of Arabidopsis thaliana during heat stress

Host-microbe multiomic profiling reveals age-dependent immune dysregulation associated with COVID-19 immunopathology

Relationship of Heterologous Virus Responses and Outcomes in Hospitalized COVID-19 Patients

Features of acute COVID-19 associated with post-acute sequelae of SARS-CoV-2 phenotypes: results from the IMPACC study

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