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Integrated analysis of multimodal single-cell data

Cell, 2021-06, Vol.184 (13), p.3573-3587.e29

2021

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MAST: a flexible statistical framework for assessing transcriptional changes and characterizing heterogeneity in single-cell RNA sequencing data

Genome Biology, 2015-12, Vol.16 (1), p.278-278, Article 278

2015

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mRNA vaccination boosts cross-variant neutralizing antibodies elicited by SARS-CoV-2 infection

Science (American Association for the Advancement of Science), 2021-06, Vol.372 (6549), p.1413-1418

2021

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HIV-1 Integration Landscape during Latent and Active Infection

Cell, 2015-01, Vol.160 (3), p.420-432

2015

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Efficacy Trial of a DNA/rAd5 HIV-1 Preventive Vaccine

The New England journal of medicine, 2013-11, Vol.369 (22), p.2083-2092

2013

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Induction of Immunity to Human Immunodeficiency Virus Type-1 by Vaccination

Immunity (Cambridge, Mass.), 2010-10, Vol.33 (4), p.542-554

2010

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CXCR3 enables recruitment and site-specific bystander activation of memory CD8 + T cells

Nature communications, 2019-11, Vol.10 (1), p.4987-15, Article 4987

2019

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Persistent serum protein signatures define an inflammatory subcategory of long COVID

Nature communications, 2023-06, Vol.14 (1), p.3417-16, Article 3417

2023

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Calibration of two validated SARS-CoV-2 pseudovirus neutralization assays for COVID-19 vaccine evaluation

Scientific reports, 2021-12, Vol.11 (1), p.23921-23921, Article 23921

2021

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An Antibody Targeting the Fusion Machinery Neutralizes Dual-Tropic Infection and Defines a Site of Vulnerability on Epstein-Barr Virus

Immunity (Cambridge, Mass.), 2018-04, Vol.48 (4), p.799-811.e9

2018

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Vaccination establishes clonal relatives of germinal center T cells in the blood of humans

The Journal of experimental medicine, 2017-07, Vol.214 (7), p.2139-2152

2017

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CXCL13 is a plasma biomarker of germinal center activity

Proceedings of the National Academy of Sciences - PNAS, 2016-03, Vol.113 (10), p.2702-2707

2016

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Immune-Correlates Analysis of an HIV-1 Vaccine Efficacy Trial

The New England journal of medicine, 2012-04, Vol.366 (14), p.1275-1286

2012

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Dissecting Polyclonal Vaccine-Induced Humoral Immunity against HIV Using Systems Serology

Cell, 2015-11, Vol.163 (4), p.988-998

2015

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HIV-1 vaccine-induced immunity in the test-of-concept Step Study: a case–cohort analysis

The Lancet (British edition), 2008-11, Vol.372 (9653), p.1894-1905

2008

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Antibody Fc effector functions and IgG3 associate with decreased HIV-1 risk

The Journal of clinical investigation, 2019-11, Vol.129 (11), p.4838-4849

2019

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Initial Events in Establishing Vaginal Entry and Infection by Human Immunodeficiency Virus Type-1

Immunity (Cambridge, Mass.), 2007-02, Vol.26 (2), p.257-270

2007

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Benign ethnic neutropenia in a South African population, and its association with HIV acquisition and adverse event reporting in an HIV vaccine clinical trial

PloS one, 2021-01, Vol.16 (1), p.e0241708

2021

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Vaginal Langerhans Cells Nonproductively Transporting HIV-1 Mediate Infection of T Cells

Journal of Virology, 2011-12, Vol.85 (24), p.13443-13447

2011

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Efficacy assessment of a cell-mediated immunity HIV-1 vaccine (the Step Study): a double-blind, randomised, placebo-controlled, test-of-concept trial

The Lancet (British edition), 2008-11, Vol.372 (9653), p.1881-1893

2008

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Machine learning identifies molecular regulators and therapeutics for targeting SARS‐CoV2‐induced cytokine release

Molecular systems biology, 2021-09, Vol.17 (9), p.n/a

2021

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Challenges and responses in human vaccine development

Current opinion in immunology, 2014-06, Vol.28, p.18-26

2014

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Broad and Potent Neutralizing Antibodies Recognize the Silent Face of the HIV Envelope

Immunity (Cambridge, Mass.), 2019-06, Vol.50 (6), p.1513-1529.e9

2019

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Long-term Effect of Depot Medroxyprogesterone Acetate on Vaginal Microbiota, Epithelial Thickness and HIV Target Cells

The Journal of infectious diseases, 2014-08, Vol.210 (4), p.651-655

2014

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Integrated analysis of multimodal single-cell data

MAST: a flexible statistical framework for assessing transcriptional changes and characterizing heterogeneity in single-cell RNA sequencing data

mRNA vaccination boosts cross-variant neutralizing antibodies elicited by SARS-CoV-2 infection

HIV-1 Integration Landscape during Latent and Active Infection

Efficacy Trial of a DNA/rAd5 HIV-1 Preventive Vaccine

Induction of Immunity to Human Immunodeficiency Virus Type-1 by Vaccination

CXCR3 enables recruitment and site-specific bystander activation of memory CD8 + T cells

Persistent serum protein signatures define an inflammatory subcategory of long COVID

Calibration of two validated SARS-CoV-2 pseudovirus neutralization assays for COVID-19 vaccine evaluation

An Antibody Targeting the Fusion Machinery Neutralizes Dual-Tropic Infection and Defines a Site of Vulnerability on Epstein-Barr Virus

Vaccination establishes clonal relatives of germinal center T cells in the blood of humans

CXCL13 is a plasma biomarker of germinal center activity

Immune-Correlates Analysis of an HIV-1 Vaccine Efficacy Trial

Dissecting Polyclonal Vaccine-Induced Humoral Immunity against HIV Using Systems Serology

HIV-1 vaccine-induced immunity in the test-of-concept Step Study: a case–cohort analysis

Antibody Fc effector functions and IgG3 associate with decreased HIV-1 risk

Initial Events in Establishing Vaginal Entry and Infection by Human Immunodeficiency Virus Type-1

Benign ethnic neutropenia in a South African population, and its association with HIV acquisition and adverse event reporting in an HIV vaccine clinical trial

Vaginal Langerhans Cells Nonproductively Transporting HIV-1 Mediate Infection of T Cells

Efficacy assessment of a cell-mediated immunity HIV-1 vaccine (the Step Study): a double-blind, randomised, placebo-controlled, test-of-concept trial

Machine learning identifies molecular regulators and therapeutics for targeting SARS‐CoV2‐induced cytokine release

Challenges and responses in human vaccine development

Broad and Potent Neutralizing Antibodies Recognize the Silent Face of the HIV Envelope

Long-term Effect of Depot Medroxyprogesterone Acetate on Vaginal Microbiota, Epithelial Thickness and HIV Target Cells

Safety and tolerability of HIV-1 multiantigen pDNA vaccine given with IL-12 plasmid DNA via electroporation, boosted with a recombinant vesicular stomatitis virus HIV Gag vaccine in healthy volunteers in a randomized, controlled clinical trial

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