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Studies on DNA-related enzymes to elucidate molecular mechanisms underlying genetic information processing and their application in genetic engineering

Bioscience, Biotechnology, and Biochemistry, 2020-09, Vol.84 (9), p.1749-1766

Ishino, Yoshizumi

2020

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A novel strategy to protect prokaryotic cells from virus infection

Engineering Microbiology, 2024-06, Vol.4 (2), p.100153, Article 100153

Ishino, Yoshizumi

2024

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Inspiration and encounters: Carl Woese and my 30‐year research journey

mLife, 2022-12, Vol.1 (4), p.368-373

Ishino, Yoshizumi

2022

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The replication machinery of LUCA: common origin of DNA replication and transcription

BMC biology, 2020-06, Vol.18 (1), p.61-61, Article 61

2020

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DNA repair in hyperthermophilic and hyperradioresistant microorganisms

Current opinion in microbiology, 2015-06, Vol.25, p.103-112

2015

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A functional endonuclease Q exists in the bacterial domain: identification and characterization of endonuclease Q from Bacillus pumilus

Bioscience, biotechnology, and biochemistry, 2017-05, Vol.81 (5), p.931-937

2017

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Replication protein A complex in Thermococcus kodakarensis interacts with DNA polymerases and helps their effective strand synthesis

Bioscience, biotechnology, and biochemistry, 2019-04, Vol.83 (4), p.695-704

2019

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Identification of a mismatch-specific endonuclease in hyperthermophilic Archaea

Nucleic acids research, 2016-04, Vol.44 (7), p.2977-2986

2016

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Switch of the interactions between the ribosomal stalk and EF1A in the GTP- and GDP-bound conformations

Scientific reports, 2019-10, Vol.9 (1), p.14761-9, Article 14761

2019

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Development of a time-series shotgun metagenomics database for monitoring microbial communities at the Pacific coast of Japan

Scientific reports, 2021-06, Vol.11 (1), p.12222-12222, Article 12222

2021

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New archaeal viruses discovered by metagenomic analysis of viral communities in enrichment cultures

Environmental microbiology, 2019-06, Vol.21 (6), p.2002-2014

2019

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Structure of the EndoMS-DNA Complex as Mismatch Restriction Endonuclease

Structure (London), 2016-11, Vol.24 (11), p.1960-1971

2016

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DJ-1 family Maillard deglycases prevent acrylamide formation

Biochemical and biophysical research communications, 2016-09, Vol.478 (3), p.1111-1116

2016

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Activation of the mismatch-specific endonuclease EndoMS/NucS by the replication clamp is required for high fidelity DNA replication

Nucleic acids research, 2018-07, Vol.46 (12), p.6206-6217

2018

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Rapid progress of DNA replication studies in Archaea, the third domain of life

Science China. Life sciences, 2012-05, Vol.55 (5), p.386-403

2012

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A Novel Type of Polyhedral Viruses Infecting Hyperthermophilic Archaea

Journal of virology, 2017-07, Vol.91 (13), p.e00589-17

2017

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Atomic structure of an archaeal GAN suggests its dual roles as an exonuclease in DNA repair and a CMG component in DNA replication

Nucleic acids research, 2016-11, Vol.44 (19), p.9505-9517

2016

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Two conformations of DNA polymerase D-PCNA-DNA, an archaeal replisome complex, revealed by cryo-electron microscopy

BMC biology, 2020-10, Vol.18 (1), p.152-152, Article 152

2020

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Crystal structure of the novel lesion-specific endonuclease PfuEndoQ from Pyrococcus furiosus

Nucleic acids research, 2018-05, Vol.46 (9), p.4807-4818

2018

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A Well-Conserved Archaeal B-Family Polymerase Functions as an Extender in Translesion Synthesis

mBio, 2022-02, Vol.13 (1), p.e0265921-e0265921

2022

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Biochemical characterization of endonuclease V from the hyperthermophilic archaeon, Pyrococcus furiosus

Journal of biochemistry (Tokyo), 2014-05, Vol.155 (5), p.325-333

2014

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Metagenomic analysis provides functional insights into seasonal change of a non-cyanobacterial prokaryotic community in temperate coastal waters

PloS one, 2021-10, Vol.16 (10), p.e0257862-e0257862

2021

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Direct visualization of DNA baton pass between replication factors bound to PCNA

Scientific reports, 2018-11, Vol.8 (1), p.16209-10, Article 16209

2018

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Ephedrae Herba and Cinnamomi Cortex interactions with G glycoprotein inhibit respiratory syncytial virus infectivity

Communications biology, 2022-01, Vol.5 (1), p.94-94, Article 94

2022

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Genetic analysis of DNA repair in the hyperthermophilic archaeon, Thermococcus kodakaraensis

Genes & Genetic Systems, 2010, Vol.85(4), pp.243-257

2010

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Studies on DNA-related enzymes to elucidate molecular mechanisms underlying genetic information processing and their application in genetic engineering

A novel strategy to protect prokaryotic cells from virus infection

Inspiration and encounters: Carl Woese and my 30‐year research journey

The replication machinery of LUCA: common origin of DNA replication and transcription

DNA repair in hyperthermophilic and hyperradioresistant microorganisms

A functional endonuclease Q exists in the bacterial domain: identification and characterization of endonuclease Q from Bacillus pumilus

Replication protein A complex in Thermococcus kodakarensis interacts with DNA polymerases and helps their effective strand synthesis

Identification of a mismatch-specific endonuclease in hyperthermophilic Archaea

Switch of the interactions between the ribosomal stalk and EF1A in the GTP- and GDP-bound conformations

Development of a time-series shotgun metagenomics database for monitoring microbial communities at the Pacific coast of Japan

New archaeal viruses discovered by metagenomic analysis of viral communities in enrichment cultures

Structure of the EndoMS-DNA Complex as Mismatch Restriction Endonuclease

DJ-1 family Maillard deglycases prevent acrylamide formation

Activation of the mismatch-specific endonuclease EndoMS/NucS by the replication clamp is required for high fidelity DNA replication

Rapid progress of DNA replication studies in Archaea, the third domain of life

A Novel Type of Polyhedral Viruses Infecting Hyperthermophilic Archaea

Atomic structure of an archaeal GAN suggests its dual roles as an exonuclease in DNA repair and a CMG component in DNA replication

Two conformations of DNA polymerase D-PCNA-DNA, an archaeal replisome complex, revealed by cryo-electron microscopy

Crystal structure of the novel lesion-specific endonuclease PfuEndoQ from Pyrococcus furiosus

A Well-Conserved Archaeal B-Family Polymerase Functions as an Extender in Translesion Synthesis

Biochemical characterization of endonuclease V from the hyperthermophilic archaeon, Pyrococcus furiosus

Metagenomic analysis provides functional insights into seasonal change of a non-cyanobacterial prokaryotic community in temperate coastal waters

Direct visualization of DNA baton pass between replication factors bound to PCNA

Ephedrae Herba and Cinnamomi Cortex interactions with G glycoprotein inhibit respiratory syncytial virus infectivity

Genetic analysis of DNA repair in the hyperthermophilic archaeon, Thermococcus kodakaraensis

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