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Transmission, Evolution, and Endogenization: Lessons Learned from Recent Retroviral Invasions

Microbiology and molecular biology reviews, 2018-03, Vol.82 (1)

2018

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Proliferation of endogenous retroviruses in the early stages of a host germ line invasion

Molecular biology and evolution, 2015-01, Vol.32 (1), p.109-120

2015

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County-wide assessments of Illinois white-tailed deer (Odocoileus virginianus) prion protein gene variation using improved primers and potential implications for management

PloS one, 2022-11, Vol.17 (11), p.e0274640-e0274640

2022

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Degradation and remobilization of endogenous retroviruses by recombination during the earliest stages of a germ-line invasion

Proceedings of the National Academy of Sciences - PNAS, 2018-08, Vol.115 (34), p.8609-8614

2018

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Combining methods for non-invasive fecal DNA enables whole genome and metagenomic analyses in wildlife biology

Frontiers in genetics, 2023-01, Vol.13, p.1021004

2023

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Variation in the PRNP gene of Pere David’s deer (Elaphurus davidianus) may impact genetic vulnerability to chronic wasting disease

Conservation genetics, 2022-04, Vol.23 (2), p.313-323

2022

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Triangulating the provenance of African elephants using mitochondrial DNA

Evolutionary applications, 2013-02, Vol.6 (2), p.253-265

2013

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Endogenous Gibbon Ape Leukemia Virus Identified in a Rodent (Melomys burtoni subsp.) from Wallacea (Indonesia)

Journal of virology, 2016-09, Vol.90 (18), p.8169-8180

2016

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Hybridization capture reveals evolution and conservation across the entire Koala retrovirus genome

PloS one, 2014-04, Vol.9 (4), p.e95633-e95633

2014

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The Impact of Variation in the Toll-like Receptor 3 Gene on Epizootic Hemorrhagic Disease in Illinois Wild White-Tailed Deer ( Odocoileus virginianus )

Genes, 2023-02, Vol.14 (2), p.426

2023

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Characterization of 29 polymorphic microsatellite markers developed by genomic screening of Sumatran rhinoceros (Dicerorhinus sumatrensis)

BMC research notes, 2021-03, Vol.14 (1), p.119-119, Article 119

2021

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Sequence variation of koala retrovirus transmembrane protein p15E among koalas from different geographic regions

Virology (New York, N.Y.), 2015-01, Vol.475, p.28-36

2015

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Evidence for selection at HIV host susceptibility genes in a West Central African human population

BMC evolutionary biology, 2012-12, Vol.12 (1), p.237, Article 237

2012

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Evolutionary Analyses and Natural Selection of Betaine-Homocysteine S-Methyltransferase (BHMT) and BHMT2 Genes

PloS one, 2015-07, Vol.10 (7), p.e0134084

2015

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Hybridization capture using short PCR products enriches small genomes by capturing flanking sequences (CapFlank)

PloS one, 2014-10, Vol.9 (10), p.e109101-e109101

2014

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Reconciling apparent conflicts between mitochondrial and nuclear phylogenies in African elephants

PloS one, 2011-06, Vol.6 (6), p.e20642-e20642

2011

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Elephant Natural History: A Genomic Perspective

Annual review of animal biosciences, 2015-02, Vol.3 (1), p.139-167

2015

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Development of 14 microsatellite markers in the Queensland koala (Phascolarctos cinereus adustus) using next generation sequencing technology

Conservation genetics resources, 2014-06, Vol.6 (2), p.429-431

2014

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Comprehensive profiling of retroviral integration sites using target enrichment methods from historical koala samples without an assembled reference genome

PeerJ (San Francisco, CA), 2016-03, Vol.4, p.e1847-e1847, Article e1847

2016

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Genetic variation at hair length candidate genes in elephants and the extinct woolly mammoth

BMC evolutionary biology, 2009-09, Vol.9 (1), p.232

2009

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County-wide assessments of Illinois white-tailed deer

PloS one, 2022-11, Vol.17 (11), p.e0274640

2022

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Short amplicon microsatellite markers for low quality elephant DNA

Conservation genetics resources, 2012-06, Vol.4 (2), p.491-494

2012

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Lion Localizer: A software tool for inferring the provenance of lions (Panthera leo) using mitochondrial DNA

The Journal of heredity, 2024-03, Vol.115 (2), p.166-172

2024

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Forest elephant mitochondrial genomes reveal that elephantid diversification in Africa tracked climate transitions

Molecular ecology, 2012-03, Vol.21 (5), p.1175-1189

2012

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Transmission, Evolution, and Endogenization: Lessons Learned from Recent Retroviral Invasions

Proliferation of endogenous retroviruses in the early stages of a host germ line invasion

Palaeogenomes of Eurasian straight-tusked elephants challenge the current view of elephant evolution

County-wide assessments of Illinois white-tailed deer (Odocoileus virginianus) prion protein gene variation using improved primers and potential implications for management

Degradation and remobilization of endogenous retroviruses by recombination during the earliest stages of a germ-line invasion

Combining methods for non-invasive fecal DNA enables whole genome and metagenomic analyses in wildlife biology

Variation in the PRNP gene of Pere David’s deer (Elaphurus davidianus) may impact genetic vulnerability to chronic wasting disease

Triangulating the provenance of African elephants using mitochondrial DNA

Endogenous Gibbon Ape Leukemia Virus Identified in a Rodent (Melomys burtoni subsp.) from Wallacea (Indonesia)

Hybridization capture reveals evolution and conservation across the entire Koala retrovirus genome

The Impact of Variation in the Toll-like Receptor 3 Gene on Epizootic Hemorrhagic Disease in Illinois Wild White-Tailed Deer ( Odocoileus virginianus )

Characterization of 29 polymorphic microsatellite markers developed by genomic screening of Sumatran rhinoceros (Dicerorhinus sumatrensis)

Sequence variation of koala retrovirus transmembrane protein p15E among koalas from different geographic regions

Evidence for selection at HIV host susceptibility genes in a West Central African human population

Evolutionary Analyses and Natural Selection of Betaine-Homocysteine S-Methyltransferase (BHMT) and BHMT2 Genes

Hybridization capture using short PCR products enriches small genomes by capturing flanking sequences (CapFlank)

Reconciling apparent conflicts between mitochondrial and nuclear phylogenies in African elephants

Elephant Natural History: A Genomic Perspective

Development of 14 microsatellite markers in the Queensland koala (Phascolarctos cinereus adustus) using next generation sequencing technology

Comprehensive profiling of retroviral integration sites using target enrichment methods from historical koala samples without an assembled reference genome

Genetic variation at hair length candidate genes in elephants and the extinct woolly mammoth

County-wide assessments of Illinois white-tailed deer

Short amplicon microsatellite markers for low quality elephant DNA

Lion Localizer: A software tool for inferring the provenance of lions (Panthera leo) using mitochondrial DNA

Forest elephant mitochondrial genomes reveal that elephantid diversification in Africa tracked climate transitions

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