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A cross-linking/mass spectrometry workflow based on MS-cleavable cross-linkers and the MeroX software for studying protein structures and protein-protein interactions

Nature protocols, 2018-12, Vol.13 (12), p.2864-2889

2018

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StavroX—A Software for Analyzing Crosslinked Products in Protein Interaction Studies

Journal of the American Society for Mass Spectrometry, 2012-01, Vol.23 (1), p.76-87

2012

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Cleavable Cross-Linker for Protein Structure Analysis: Reliable Identification of Cross-Linking Products by Tandem MS

Analytical chemistry (Washington), 2010-08, Vol.82 (16), p.6958-6968

2010

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Widely Used Commercial ELISA Does Not Detect Precursor of Haptoglobin2, but Recognizes Properdin as a Potential Second Member of the Zonulin Family

Frontiers in endocrinology (Lausanne), 2018-02, Vol.9, p.22-22

2018

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Flexibility of intrinsically disordered degrons in AUX/IAA proteins reinforces auxin co-receptor assemblies

Nature communications, 2020-05, Vol.11 (1), p.2277-2277, Article 2277

2020

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Structural assessment of the full-length wild-type tumor suppressor protein p53 by mass spectrometry-guided computational modeling

Scientific reports, 2023-05, Vol.13 (1), p.8497-8497, Article 8497

2023

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Monitoring Solution Structures of Peroxisome Proliferator-Activated Receptor β/δ upon Ligand Binding

PloS one, 2016-03, Vol.11 (3), p.e0151412-e0151412

2016

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A Simple Cross-Linking/Mass Spectrometry Workflow for Studying System-wide Protein Interactions

Analytical chemistry (Washington), 2019-08, Vol.91 (15), p.10236-10244

2019

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Acidosis-Induced Changes in Proteome Patterns of the Prostate Cancer-Derived Tumor Cell Line AT‑1

Journal of proteome research, 2015-09, Vol.14 (9), p.3996-4004

2015

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Analysis of nidogen-1/laminin γ1 interaction by cross-linking, mass spectrometry, and computational modeling reveals multiple binding modes

PloS one, 2014-11, Vol.9 (11), p.e112886-e112886

2014

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Author Correction: Flexibility of intrinsically disordered degrons in AUX/IAA proteins reinforces auxin co-receptor assemblies

Nature communications, 2021-03, Vol.12 (1), p.1768-1768, Article 1768

2021

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Cross-Linking/Mass Spectrometry Combined with Ion Mobility on a timsTOF Pro Instrument for Structural Proteomics

Analytical chemistry (Washington), 2021-08, Vol.93 (33), p.11442-11450

2021

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Automated Assignment of MS/MS Cleavable Cross-Links in Protein 3D-Structure Analysis

Journal of the American Society for Mass Spectrometry, 2015-01, Vol.26 (1), p.83-97

2015

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Direct Observation of “Elongated” Conformational States in α‐Synuclein upon Liquid‐Liquid Phase Separation

Angewandte Chemie (International ed.), 2022-11, Vol.61 (46), p.e202205726-n/a

International ed. in English, 2022

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Structure of full-length p53 tumor suppressor probed by chemical cross-linking and mass spectrometry

Proteomics (Weinheim), 2015-08, Vol.15 (16), p.2746-2755

2015

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Selective selC-independent selenocysteine incorporation into formate dehydrogenases

PloS one, 2013-04, Vol.8 (4), p.e61913

2013

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Royalactin is not a royal making of a queen

Nature (London), 2016-09, Vol.537 (7621), p.E10-E12

2016

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The First MS-Cleavable, Photo-Thiol-Reactive Cross-Linker for Protein Structural Studies

Journal of the American Society for Mass Spectrometry, 2019, Vol.30 (1), p.139-148

2019

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Munc13-like skMLCK variants cannot mimic the unique calmodulin binding mode of Munc13 as evidenced by chemical cross-linking and mass spectrometry

PloS one, 2013-10, Vol.8 (10), p.e75119-e75119

2013

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Extending the cross-linking/mass spectrometry strategy: Facile incorporation of photo-activatable amino acids into the model protein calmodulin in Escherichia coli cells

Methods (San Diego, Calif.), 2015-11, Vol.89, p.121-127

2015

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Structural analysis of 70S ribosomes by cross-linking/mass spectrometry reveals conformational plasticity

Scientific reports, 2020-07, Vol.10 (1), p.12618-12618, Article 12618

2020

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Delineating the Molecular Basis of the Calmodulin‒bMunc13-2 Interaction by Cross-Linking/Mass Spectrometry-Evidence for a Novel CaM Binding Motif in bMunc13-2

Cells (Basel, Switzerland), 2020-01, Vol.9 (1), p.136

2020

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Heterobifunctional isotope-labeled amine-reactive photo-cross-linker for structural investigation of proteins by matrix-assisted laser desorption/ionization tandem time-of-flight and electrospray ionization LTQ-Orbitrap mass spectrometry

Rapid communications in mass spectrometry, 2009-09, Vol.23 (17), p.2811-2818

2009

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Optimizing the enrichment of cross-linked products for mass spectrometric protein analysis

Rapid communications in mass spectrometry, 2012-03, Vol.26 (6), p.653-658

2012

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An Integrated Mass Spectrometry Based Approach to Probe the Structure of the Full‐Length Wild‐Type Tetrameric p53 Tumor Suppressor

Angewandte Chemie International Edition, 2017-01, Vol.56 (1), p.275-279

International ed. in English, 2017

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A cross-linking/mass spectrometry workflow based on MS-cleavable cross-linkers and the MeroX software for studying protein structures and protein-protein interactions

StavroX—A Software for Analyzing Crosslinked Products in Protein Interaction Studies

Cleavable Cross-Linker for Protein Structure Analysis: Reliable Identification of Cross-Linking Products by Tandem MS

Widely Used Commercial ELISA Does Not Detect Precursor of Haptoglobin2, but Recognizes Properdin as a Potential Second Member of the Zonulin Family

Flexibility of intrinsically disordered degrons in AUX/IAA proteins reinforces auxin co-receptor assemblies

Structural assessment of the full-length wild-type tumor suppressor protein p53 by mass spectrometry-guided computational modeling

Monitoring Solution Structures of Peroxisome Proliferator-Activated Receptor β/δ upon Ligand Binding

A Simple Cross-Linking/Mass Spectrometry Workflow for Studying System-wide Protein Interactions

Acidosis-Induced Changes in Proteome Patterns of the Prostate Cancer-Derived Tumor Cell Line AT‑1

Analysis of nidogen-1/laminin γ1 interaction by cross-linking, mass spectrometry, and computational modeling reveals multiple binding modes

Author Correction: Flexibility of intrinsically disordered degrons in AUX/IAA proteins reinforces auxin co-receptor assemblies

Cross-Linking/Mass Spectrometry Combined with Ion Mobility on a timsTOF Pro Instrument for Structural Proteomics

Automated Assignment of MS/MS Cleavable Cross-Links in Protein 3D-Structure Analysis

Direct Observation of “Elongated” Conformational States in α‐Synuclein upon Liquid‐Liquid Phase Separation

Structure of full-length p53 tumor suppressor probed by chemical cross-linking and mass spectrometry

Selective selC-independent selenocysteine incorporation into formate dehydrogenases

Royalactin is not a royal making of a queen

The First MS-Cleavable, Photo-Thiol-Reactive Cross-Linker for Protein Structural Studies

Munc13-like skMLCK variants cannot mimic the unique calmodulin binding mode of Munc13 as evidenced by chemical cross-linking and mass spectrometry

Extending the cross-linking/mass spectrometry strategy: Facile incorporation of photo-activatable amino acids into the model protein calmodulin in Escherichia coli cells

Structural analysis of 70S ribosomes by cross-linking/mass spectrometry reveals conformational plasticity

Delineating the Molecular Basis of the Calmodulin‒bMunc13-2 Interaction by Cross-Linking/Mass Spectrometry-Evidence for a Novel CaM Binding Motif in bMunc13-2

Heterobifunctional isotope-labeled amine-reactive photo-cross-linker for structural investigation of proteins by matrix-assisted laser desorption/ionization tandem time-of-flight and electrospray ionization LTQ-Orbitrap mass spectrometry

Optimizing the enrichment of cross-linked products for mass spectrometric protein analysis

An Integrated Mass Spectrometry Based Approach to Probe the Structure of the Full‐Length Wild‐Type Tetrameric p53 Tumor Suppressor

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