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LipiDex: An Integrated Software Package for High-Confidence Lipid Identification

Cell systems, 2018-05, Vol.6 (5), p.621-625.e5

2018

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Accelerating Lipidomic Method Development through in Silico Simulation

Analytical chemistry (Washington), 2019-08, Vol.91 (15), p.9698-9706

2019

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UbiB proteins regulate cellular CoQ distribution in Saccharomyces cerevisiae

Nature communications, 2021-08, Vol.12 (1), p.4769-4769, Article 4769

2021

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Online Bipolar Dual Spray for the Charge State Reduction and Characterization of Complex Synthetic Polymers

Journal of the American Society for Mass Spectrometry, 2023-12, Vol.34 (12), p.2840-2848

2023

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Maximizing MS/MS Acquisition for Lipidomics Using Capillary Separation and Orbitrap Tribrid Mass Spectrometer

Analytical chemistry (Washington), 2022-02, Vol.94 (7), p.3394-3399

2022

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Mapping Lipid Fragmentation for Tailored Mass Spectral Libraries

Journal of the American Society for Mass Spectrometry, 2019-04, Vol.30 (4), p.659-668

2019

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Defining mitochondrial protein functions through deep multiomic profiling

Nature (London), 2022-06, Vol.606 (7913), p.382-388

2022

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Mitochondrial protein functions elucidated by multi-omic mass spectrometry profiling

Nature biotechnology, 2016-11, Vol.34 (11), p.1191-1197

2016

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The effects of sequencing depth on the assembly of coding and noncoding transcripts in the human genome

BMC genomics, 2022-07, Vol.23 (1), p.1-487, Article 487

2022

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Improved Structural Characterization of Glycerophospholipids and Sphingomyelins with Real-Time Library Searching

Analytical chemistry (Washington), 2023-05, Vol.95 (20), p.7813-7821

2023

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Multi-omics Reveal Specific Targets of the RNA-Binding Protein Puf3p and Its Orchestration of Mitochondrial Biogenesis

Cell systems, 2018-01, Vol.6 (1), p.125-135.e6

2018

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Monitoring Epoxidized Soybean Oil Degradation Using Liquid Chromatography–Mass Spectrometry and In Silico Spectral Libraries

Journal of the American Society for Mass Spectrometry, 2024-08, Vol.35 (8), p.1940-1949

2024

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Conserved Lipid and Small-Molecule Modulation of COQ8 Reveals Regulation of the Ancient Kinase-like UbiB Family

Cell chemical biology, 2018-02, Vol.25 (2), p.154-165.e11

2018

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Cerebellar Ataxia and Coenzyme Q Deficiency through Loss of Unorthodox Kinase Activity

Molecular cell, 2016-08, Vol.63 (4), p.608-620

2016

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Multi-omic Mitoprotease Profiling Defines a Role for Oct1p in Coenzyme Q Production

Molecular cell, 2017-12, Vol.68 (5), p.970-977.e11

2017

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Biorelevant dissolution testing of a weak base: Interlaboratory reproducibility and investigation of parameters controlling in vitro precipitation

European journal of pharmaceutics and biopharmaceutics, 2019-07, Vol.140, p.141-148

2019

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Caloric Restriction Engages Hepatic RNA Processing Mechanisms in Rhesus Monkeys

Cell metabolism, 2018-03, Vol.27 (3), p.677-688.e5

2018

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Ongoing resolution of duplicate gene functions shapes the diversification of a metabolic network

eLife, 2016-09, Vol.5

2016

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Ptc7p Dephosphorylates Select Mitochondrial Proteins to Enhance Metabolic Function

Cell reports (Cambridge), 2017-01, Vol.18 (2), p.307-313

2017

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Genome-wide analysis of STAT3 binding in vivo predicts effectors of the anti-inflammatory response in macrophages

Blood, 2012-03, Vol.119 (13), p.e110-e119

2012

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Genomic analysis of LPS-stimulated myeloid cells identifies a common pro-inflammatory response but divergent IL-10 anti-inflammatory responses

Scientific reports, 2015-03, Vol.5 (1), p.9100-9100, Article 9100

2015

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The repertoires of ubiquitinating and deubiquitinating enzymes in eukaryotic genomes

Molecular biology and evolution, 2013-05, Vol.30 (5), p.1172-1187

2013

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Automated Ongoing Commissioning via Building Control Systems

Energy engineering, 2016-01, Vol.113 (1), p.11-20

Hutchins, Paul F.

2016

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Systematic identification of transcriptional regulatory modules from protein-protein interaction networks

Nucleic acids research, 2014-01, Vol.42 (1), p.e6

2014

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Distinct transcriptional regulatory modules underlie STAT3's cell type-independent and cell type-specific functions

Nucleic acids research, 2013-02, Vol.41 (4), p.2155

2013

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LipiDex: An Integrated Software Package for High-Confidence Lipid Identification

Accelerating Lipidomic Method Development through in Silico Simulation

UbiB proteins regulate cellular CoQ distribution in Saccharomyces cerevisiae

Online Bipolar Dual Spray for the Charge State Reduction and Characterization of Complex Synthetic Polymers

Maximizing MS/MS Acquisition for Lipidomics Using Capillary Separation and Orbitrap Tribrid Mass Spectrometer

Mapping Lipid Fragmentation for Tailored Mass Spectral Libraries

Defining mitochondrial protein functions through deep multiomic profiling

Mitochondrial protein functions elucidated by multi-omic mass spectrometry profiling

The effects of sequencing depth on the assembly of coding and noncoding transcripts in the human genome

Improved Structural Characterization of Glycerophospholipids and Sphingomyelins with Real-Time Library Searching

Multi-omics Reveal Specific Targets of the RNA-Binding Protein Puf3p and Its Orchestration of Mitochondrial Biogenesis

Monitoring Epoxidized Soybean Oil Degradation Using Liquid Chromatography–Mass Spectrometry and In Silico Spectral Libraries

Conserved Lipid and Small-Molecule Modulation of COQ8 Reveals Regulation of the Ancient Kinase-like UbiB Family

Cerebellar Ataxia and Coenzyme Q Deficiency through Loss of Unorthodox Kinase Activity

Multi-omic Mitoprotease Profiling Defines a Role for Oct1p in Coenzyme Q Production

Biorelevant dissolution testing of a weak base: Interlaboratory reproducibility and investigation of parameters controlling in vitro precipitation

Caloric Restriction Engages Hepatic RNA Processing Mechanisms in Rhesus Monkeys

Ongoing resolution of duplicate gene functions shapes the diversification of a metabolic network

Ptc7p Dephosphorylates Select Mitochondrial Proteins to Enhance Metabolic Function

Genome-wide analysis of STAT3 binding in vivo predicts effectors of the anti-inflammatory response in macrophages

Genomic analysis of LPS-stimulated myeloid cells identifies a common pro-inflammatory response but divergent IL-10 anti-inflammatory responses

The repertoires of ubiquitinating and deubiquitinating enzymes in eukaryotic genomes

Automated Ongoing Commissioning via Building Control Systems

Systematic identification of transcriptional regulatory modules from protein-protein interaction networks

Distinct transcriptional regulatory modules underlie STAT3's cell type-independent and cell type-specific functions

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