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Understanding Biases in Ribosome Profiling Experiments Reveals Signatures of Translation Dynamics in Yeast

PLoS genetics, 2015-12, Vol.11 (12), p.e1005732-e1005732

2015

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Mapping the genetic landscape of DNA double-strand break repair

Cell, 2021-10, Vol.184 (22), p.5653-5669.e25

2021

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Efficient C•G-to-G•C base editors developed using CRISPRi screens, target-library analysis, and machine learning

Nature biotechnology, 2021-11, Vol.39 (11), p.1414-1425

2021

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Combinatorial single-cell CRISPR screens by direct guide RNA capture and targeted sequencing

Nature biotechnology, 2020-08, Vol.38 (8), p.954-961

2020

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Inference of single-cell phylogenies from lineage tracing data using Cassiopeia

Genome Biology, 2020-04, Vol.21 (1), p.92-92, Article 92

2020

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CAT-tailing as a fail-safe mechanism for efficient degradation of stalled nascent polypeptides

Science (American Association for the Advancement of Science), 2017-07, Vol.357 (6349), p.414-417

2017

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Titrating gene expression using libraries of systematically attenuated CRISPR guide RNAs

Nature biotechnology, 2020-03, Vol.38 (3), p.355-364

2020

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GIGYF2 and 4EHP Inhibit Translation Initiation of Defective Messenger RNAs to Assist Ribosome-Associated Quality Control

Molecular cell, 2020-09, Vol.79 (6), p.950-962.e6

2020

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High-throughput DNA sequencing errors are reduced by orders of magnitude using circle sequencing

Proceedings of the National Academy of Sciences - PNAS, 2013-12, Vol.110 (49), p.19872-19877

2013

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Regulation of translation by methylation multiplicity of 18S rRNA

Cell reports (Cambridge), 2021-03, Vol.34 (10), p.108825-108825, Article 108825

2021

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CRISPR-based functional genomics in human dendritic cells

eLife, 2021-04, Vol.10

2021

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Ribosome Profiling: Global Views of Translation

Cold Spring Harbor perspectives in biology, 2019-05, Vol.11 (5), p.a032698

2019

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Enhanced prime editing systems by manipulating cellular determinants of editing outcomes

Cell, 2021-10, Vol.184 (22), p.5635-5652.e29

2021

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Mapping information-rich genotype-phenotype landscapes with genome-scale Perturb-seq

Cell, 2022-07, Vol.185 (14), p.2559-2575.e28

2022

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Local Correlations in Codon Preferences Do Not Support a Model of tRNA Recycling

Cell reports (Cambridge), 2014-09, Vol.8 (6), p.1624-1629

2014

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Improved Ribosome-Footprint and mRNA Measurements Provide Insights into Dynamics and Regulation of Yeast Translation

Cell reports (Cambridge), 2016-02, Vol.14 (7), p.1787-1799

2016

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Reply to Schmitt et al.: Data-filtering schemes for avoiding double-counting in circle sequencing

Proceedings of the National Academy of Sciences - PNAS, 2014-04, Vol.111 (16), p.E1561-E1561

2014

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Deciphering cell states and genealogies of human haematopoiesis

Nature (London), 2024-03, Vol.627 (8003), p.389-398

2024

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Ribosomal Architecture: Constraints Imposed by the Need for Self-Production

Current biology, 2017-08, Vol.27 (16), p.R798-R800

2017

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Author Correction: Efficient C•G-to-G•C base editors developed using CRISPRi screens, target-library analysis, and machine learning

Nature biotechnology, 2023-11, Vol.41 (11), p.1655-1655

2023

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Efficient CG-to-GC base editors developed using CRISPRi screens, target-library analysis, and machine learning

Nature biotechnology, 2021-11, Vol.39 (11), p.1414

2021

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Development of a set of C•G-to-G•C transversion base editors from CRISPRi screens, target-library analysis, and machine learning

Nature biotechnology, 2021-06, Vol.39 (11), p.1414-1425

2021

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Understanding Biases in Ribosome Profiling Experiments Reveals Signatures of Translation Dynamics in Yeast: e1005732

PLoS genetics, 2015-12, Vol.11 (12)

2015

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Massively Parallel Biophysical Analysis of CRISPR-Cas Complexes on Next Generation Sequencing Chips

Cell, 2017-06, Vol.170 (1), p.35-47.e13

2017

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Understanding Biases in Ribosome Profiling Experiments Reveals Signatures of Translation Dynamics in Yeast

Mapping the genetic landscape of DNA double-strand break repair

Efficient C•G-to-G•C base editors developed using CRISPRi screens, target-library analysis, and machine learning

Combinatorial single-cell CRISPR screens by direct guide RNA capture and targeted sequencing

Inference of single-cell phylogenies from lineage tracing data using Cassiopeia

CAT-tailing as a fail-safe mechanism for efficient degradation of stalled nascent polypeptides

Titrating gene expression using libraries of systematically attenuated CRISPR guide RNAs

GIGYF2 and 4EHP Inhibit Translation Initiation of Defective Messenger RNAs to Assist Ribosome-Associated Quality Control

High-throughput DNA sequencing errors are reduced by orders of magnitude using circle sequencing

The ER membrane protein complex interacts cotranslationally to enable biogenesis of multipass membrane proteins

Regulation of translation by methylation multiplicity of 18S rRNA

CRISPR-based functional genomics in human dendritic cells

Ribosome Profiling: Global Views of Translation

Enhanced prime editing systems by manipulating cellular determinants of editing outcomes

Mapping information-rich genotype-phenotype landscapes with genome-scale Perturb-seq

Local Correlations in Codon Preferences Do Not Support a Model of tRNA Recycling

Improved Ribosome-Footprint and mRNA Measurements Provide Insights into Dynamics and Regulation of Yeast Translation

Reply to Schmitt et al.: Data-filtering schemes for avoiding double-counting in circle sequencing

Deciphering cell states and genealogies of human haematopoiesis

Ribosomal Architecture: Constraints Imposed by the Need for Self-Production

Author Correction: Efficient C•G-to-G•C base editors developed using CRISPRi screens, target-library analysis, and machine learning

Efficient CG-to-GC base editors developed using CRISPRi screens, target-library analysis, and machine learning

Development of a set of C•G-to-G•C transversion base editors from CRISPRi screens, target-library analysis, and machine learning

Understanding Biases in Ribosome Profiling Experiments Reveals Signatures of Translation Dynamics in Yeast: e1005732

Massively Parallel Biophysical Analysis of CRISPR-Cas Complexes on Next Generation Sequencing Chips

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