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Quantitative Mass Spectrometric Multiple Reaction Monitoring Assays for Major Plasma Proteins

Molecular & cellular proteomics, 2006-04, Vol.5 (4), p.573-588

2006

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Multi-laboratory assessment of reproducibility, qualitative and quantitative performance of SWATH-mass spectrometry

Nature communications, 2017-08, Vol.8 (1), p.291-12, Article 291

2017

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Generation of High-Quality SWATH ® Acquisition Data for Label-free Quantitative Proteomics Studies Using TripleTOF ® Mass Spectrometers

Methods in molecular biology (Clifton, N.J.), 2017-01, Vol.1550, p.223

2017

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The Paragon Algorithm, a Next Generation Search Engine That Uses Sequence Temperature Values and Feature Probabilities to Identify Peptides from Tandem Mass Spectra

Molecular & cellular proteomics, 2007-09, Vol.6 (9), p.1638-1655

2007

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Mitotic deacetylase complex (MiDAC) recognizes the HIV-1 core promoter to control activated viral gene expression

PLoS pathogens, 2024-05, Vol.20 (5), p.e1011821-e1011821

2024

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Acoustic ejection mass spectrometry empowers ultra-fast protein biomarker quantification

Nature communications, 2024-06, Vol.15 (1), p.5114-11

2024

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Statistical control of peptide and protein error rates in large-scale targeted data-independent acquisition analyses

Nature methods, 2017-09, Vol.14 (9), p.921-927

2017

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Localization and Quantification of Post-Translational Modifications of Proteins Using Electron Activated Dissociation Fragmentation on a Fast-Acquisition Time-of-Flight Mass Spectrometer

Journal of the American Society for Mass Spectrometry, 2023-10, Vol.34 (10), p.2199-2210

2023

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Engineered metalloregulation of azide binding affinity and reduction potential of horse heart myoglobin

Dalton transactions : an international journal of inorganic chemistry, 2013-03, Vol.42 (9), p.3151-3155

2013

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Highly Reproducible Automated Proteomics Sample Preparation Workflow for Quantitative Mass Spectrometry

Journal of proteome research, 2018-01, Vol.17 (1), p.420-428

2018

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Coupled Global and Targeted Proteomics of Human Embryonic Stem Cells during Induced Differentiation

Molecular & cellular proteomics, 2008-04, Vol.7 (4), p.750-767

2008

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Multiplexed, Scheduled, High-Resolution Parallel Reaction Monitoring on a Full Scan QqTOF Instrument with Integrated Data-Dependent and Targeted Mass Spectrometric Workflows

Analytical chemistry (Washington), 2015-10, Vol.87 (20), p.10222-10229

2015

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Substantial downregulation of mitochondrial and peroxisomal proteins during acute kidney injury revealed by data‐independent acquisition proteomics

Proteomics (Weinheim), 2024-03, Vol.24 (5), p.e2300162-n/a

2024

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Mapping Citrullinated Sites in Multiple Organs of Mice Using Hypercitrullinated Library

Journal of proteome research, 2019-05, Vol.18 (5), p.2270-2278

2019

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Quantitative protein determination for CYP induction via LC-MS/MS

Proteomics (Weinheim), 2011-01, Vol.11 (1), p.33-41

2011

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CysTRAQ — A combination of iTRAQ and enrichment of cysteinyl peptides for uncovering and quantifying hidden proteomes

Journal of proteomics, 2012-01, Vol.75 (3), p.857-867

2012

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Total Chemical Synthesis of a Functional Interacting Protein Pair: The Protooncogene H-Ras and the Ras-Binding Domain of Its Effector c-Raf1

Proceedings of the National Academy of Sciences - PNAS, 2003-04, Vol.100 (9), p.5075-5080

2003

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Design and Chemical Synthesis of a Homogeneous Polymer-Modified Erythropoiesis Protein

Science (American Association for the Advancement of Science), 2003-02, Vol.299 (5608), p.884-887

2003

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Introduction and Characterization of a Functionally Linked Metal Ion Binding Site at the Exposed Heme Edge of Myoglobin

Proceedings of the National Academy of Sciences - PNAS, 2003-04, Vol.100 (7), p.3647-3652

2003

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Perspectives and opinions from scientific leaders on the evolution of data-independent acquisition for quantitative proteomics and novel biological applications

Australian journal of chemistry, 2023-07, Vol.76 (8), p.379-398

2023

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Relative and absolute quantitative expression profiling of cytochromes P450 using isotope-coded affinity tags

Proteomics (Weinheim), 2006-03, Vol.6 (6), p.1934-1947

2006

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Efficient Coupled Oxidation of Heme by an Active Site Variant of Horse Heart Myoglobin

Journal of the American Chemical Society, 1996-12, Vol.118 (51), p.12909-12915

1996

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Structural and Functional Definition of the Human Chitinase Chitin-binding Domain

The Journal of biological chemistry, 2000-01, Vol.275 (1), p.514-520

2000

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novel strategy for the targeted analysis of protein and peptide metabolites

Proteomics (Weinheim), 2011-01, Vol.11 (2), p.183-192

2011

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Mitotic deacetylase complex

PLoS pathogens, 2024-05, Vol.20 (5), p.e1011821

2024

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Quantitative Mass Spectrometric Multiple Reaction Monitoring Assays for Major Plasma Proteins

Multi-laboratory assessment of reproducibility, qualitative and quantitative performance of SWATH-mass spectrometry

Generation of High-Quality SWATH ® Acquisition Data for Label-free Quantitative Proteomics Studies Using TripleTOF ® Mass Spectrometers

The Paragon Algorithm, a Next Generation Search Engine That Uses Sequence Temperature Values and Feature Probabilities to Identify Peptides from Tandem Mass Spectra

Mitotic deacetylase complex (MiDAC) recognizes the HIV-1 core promoter to control activated viral gene expression

Acoustic ejection mass spectrometry empowers ultra-fast protein biomarker quantification

Statistical control of peptide and protein error rates in large-scale targeted data-independent acquisition analyses

Localization and Quantification of Post-Translational Modifications of Proteins Using Electron Activated Dissociation Fragmentation on a Fast-Acquisition Time-of-Flight Mass Spectrometer

Engineered metalloregulation of azide binding affinity and reduction potential of horse heart myoglobin

Highly Reproducible Automated Proteomics Sample Preparation Workflow for Quantitative Mass Spectrometry

Coupled Global and Targeted Proteomics of Human Embryonic Stem Cells during Induced Differentiation

Multiplexed, Scheduled, High-Resolution Parallel Reaction Monitoring on a Full Scan QqTOF Instrument with Integrated Data-Dependent and Targeted Mass Spectrometric Workflows

Substantial downregulation of mitochondrial and peroxisomal proteins during acute kidney injury revealed by data‐independent acquisition proteomics

Mapping Citrullinated Sites in Multiple Organs of Mice Using Hypercitrullinated Library

Quantitative protein determination for CYP induction via LC-MS/MS

CysTRAQ — A combination of iTRAQ and enrichment of cysteinyl peptides for uncovering and quantifying hidden proteomes

Total Chemical Synthesis of a Functional Interacting Protein Pair: The Protooncogene H-Ras and the Ras-Binding Domain of Its Effector c-Raf1

Design and Chemical Synthesis of a Homogeneous Polymer-Modified Erythropoiesis Protein

Introduction and Characterization of a Functionally Linked Metal Ion Binding Site at the Exposed Heme Edge of Myoglobin

Perspectives and opinions from scientific leaders on the evolution of data-independent acquisition for quantitative proteomics and novel biological applications

Relative and absolute quantitative expression profiling of cytochromes P450 using isotope-coded affinity tags

Efficient Coupled Oxidation of Heme by an Active Site Variant of Horse Heart Myoglobin

Structural and Functional Definition of the Human Chitinase Chitin-binding Domain

novel strategy for the targeted analysis of protein and peptide metabolites

Mitotic deacetylase complex

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