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AMPlify: attentive deep learning model for discovery of novel antimicrobial peptides effective against WHO priority pathogens

BMC genomics, 2022-01, Vol.23 (1), p.77-15, Article 77

2022

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Cov2clusters: genomic clustering of SARS-CoV-2 sequences

BMC genomics, 2022-10, Vol.23 (1), p.1-710, Article 710

2022

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Self-Collected Saline Gargle Samples as an Alternative to Health Care Worker-Collected Nasopharyngeal Swabs for COVID-19 Diagnosis in Outpatients

Journal of clinical microbiology, 2021-03, Vol.59 (4)

2021

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Single-dose mRNA Vaccine Effectiveness Against Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2), Including Alpha and Gamma Variants: A Test-negative Design in Adults 70 Years and Older in British Columbia, Canada

Clinical infectious diseases, 2022-04, Vol.74 (7), p.1158-1165

2022

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Associating Biological Activity and Predicted Structure of Antimicrobial Peptides from Amphibians and Insects

Antibiotics (Basel), 2022-11, Vol.11 (12), p.1710

2022

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Diagnostic performance and clinical application of preoperative COVID-19 bedside testing with ID NOW

Canadian journal of anesthesia, 2021-10, Vol.68 (10), p.1569-1571

2021

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Correction to: Diagnostic performance and clinical application of preoperative COVID-19 bedside testing with ID NOW

Canadian journal of anesthesia, 2021-11, Vol.68 (11), p.1729-1729

2021

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Mining Amphibian and Insect Transcriptomes for Antimicrobial Peptide Sequences with rAMPage

Antibiotics (Basel), 2022-07, Vol.11 (7), p.952

2022

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Epidemiologic and Genotypic Review of Carbapenemase-Producing Organisms in British Columbia, Canada, between 2008 and 2014

Journal of clinical microbiology, 2016-02, Vol.54 (2), p.317-327

2016

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Cyclospora spp. in herbs and water samples collected from markets and farms in Hanoi, Vietnam

Tropical medicine & international health, 2008-11, Vol.13 (11), p.1415-1420

2008

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Rapid Increase in SARS-CoV-2 P.1 Lineage Leading to Codominance with B.1.1.7 Lineage, British Columbia, Canada, January-April 2021

Emerging infectious diseases, 2021-11, Vol.27 (11), p.2802-2809

2021

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Review of 16S and ITS Direct Sequencing Results for Clinical Specimens Submitted to a Reference Laboratory

The Canadian journal of infectious diseases & medical microbiology, 2016-01, Vol.2016, p.4210129-6

2016

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Cephalosporin and Azithromycin Susceptibility in Neisseria gonorrhoeae Isolates by Site of Infection, British Columbia, 2006 to 2011

Sexually transmitted diseases, 2013-01, Vol.40 (1), p.46-51

2013

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Emergence of SARS-CoV-2 Delta Variant and Effect of Nonpharmaceutical Interventions, British Columbia, Canada

Emerging infectious diseases, 2023-10, Vol.29 (10), p.1999-2007

2023

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De novo synthetic antimicrobial peptide design with a recurrent neural network

Protein science, 2024-08, Vol.33 (8), p.e5088-n/a

2024

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Comparative Single-Dose mRNA and ChAdOx1 Vaccine Effectiveness Against Severe Acute Respiratory Syndrome Coronavirus 2, Including Variants of Concern: Test-Negative Design, British Columbia, Canada

The Journal of infectious diseases, 2022-01, Vol.226 (3), p.485-496

2022

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Abbott ID NOW™ COVID-19 assay: do not discard the swab

Diagnostic microbiology and infectious disease, 2023-04, Vol.105 (4), p.115832-115832, Article 115832

2023

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Evaluation of observed and unobserved self-collection of saline gargle samples for the detection of SARS-CoV-2 in outpatients

Diagnostic microbiology and infectious disease, 2022-02, Vol.102 (2), p.115566-115566, Article 115566

2022

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The utility of SARS-CoV-2 genomic data for informative clustering under different epidemiological scenarios and sampling

Infection, genetics and evolution, 2023-09, Vol.113, p.105484-105484, Article 105484

2023

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FilmArray respiratory panel assay: An effective method for detecting viral and atypical bacterial pathogens in bronchoscopy specimens

Diagnostic microbiology and infectious disease, 2019-12, Vol.95 (4), p.114880-114880, Article 114880

2019

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Characterization of Clostridium difficile Strains in British Columbia, Canada: A Shift from NAP1 Majority (2008) to Novel Strain Types (2013) in One Region

The Canadian journal of infectious diseases & medical microbiology, 2016-01, Vol.2016, p.8207418-8

2016

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Rapid Detection of KPC, NDM, and OXA-48-Like Carbapenemases by Real-Time PCR from Rectal Swab Surveillance Samples

Journal of clinical microbiology, 2015-08, Vol.53 (8), p.2731-2733

2015

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Mycoplasma genitalium Antibiotic Resistance–Mediating Mutations in Canadian Women With or Without Chlamydia Trachomatis Infection

Sexually transmitted diseases, 2017-07, Vol.44 (7), p.433-435

2017

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Outbreak of Shigellosis in a Homeless Shelter With Healthcare Worker Transmission-British Columbia, April 2015

Infection control and hospital epidemiology, 2015-11, Vol.36 (11), p.1372-1373

2015

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AMPlify: attentive deep learning model for discovery of novel antimicrobial peptides effective against WHO priority pathogens

Cov2clusters: genomic clustering of SARS-CoV-2 sequences

Self-Collected Saline Gargle Samples as an Alternative to Health Care Worker-Collected Nasopharyngeal Swabs for COVID-19 Diagnosis in Outpatients

Single-dose mRNA Vaccine Effectiveness Against Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2), Including Alpha and Gamma Variants: A Test-negative Design in Adults 70 Years and Older in British Columbia, Canada

Associating Biological Activity and Predicted Structure of Antimicrobial Peptides from Amphibians and Insects

Diagnostic performance and clinical application of preoperative COVID-19 bedside testing with ID NOW

Correction to: Diagnostic performance and clinical application of preoperative COVID-19 bedside testing with ID NOW

Mining Amphibian and Insect Transcriptomes for Antimicrobial Peptide Sequences with rAMPage

Two-Dose Severe Acute Respiratory Syndrome Coronavirus 2 Vaccine Effectiveness With Mixed Schedules and Extended Dosing Intervals: Test-Negative Design Studies From British Columbia and Quebec, Canada

Epidemiologic and Genotypic Review of Carbapenemase-Producing Organisms in British Columbia, Canada, between 2008 and 2014

Cyclospora spp. in herbs and water samples collected from markets and farms in Hanoi, Vietnam

Rapid Increase in SARS-CoV-2 P.1 Lineage Leading to Codominance with B.1.1.7 Lineage, British Columbia, Canada, January-April 2021

Review of 16S and ITS Direct Sequencing Results for Clinical Specimens Submitted to a Reference Laboratory

Cephalosporin and Azithromycin Susceptibility in Neisseria gonorrhoeae Isolates by Site of Infection, British Columbia, 2006 to 2011

Emergence of SARS-CoV-2 Delta Variant and Effect of Nonpharmaceutical Interventions, British Columbia, Canada

De novo synthetic antimicrobial peptide design with a recurrent neural network

Comparative Single-Dose mRNA and ChAdOx1 Vaccine Effectiveness Against Severe Acute Respiratory Syndrome Coronavirus 2, Including Variants of Concern: Test-Negative Design, British Columbia, Canada

Abbott ID NOW™ COVID-19 assay: do not discard the swab

Evaluation of observed and unobserved self-collection of saline gargle samples for the detection of SARS-CoV-2 in outpatients

The utility of SARS-CoV-2 genomic data for informative clustering under different epidemiological scenarios and sampling

FilmArray respiratory panel assay: An effective method for detecting viral and atypical bacterial pathogens in bronchoscopy specimens

Characterization of Clostridium difficile Strains in British Columbia, Canada: A Shift from NAP1 Majority (2008) to Novel Strain Types (2013) in One Region

Rapid Detection of KPC, NDM, and OXA-48-Like Carbapenemases by Real-Time PCR from Rectal Swab Surveillance Samples

Mycoplasma genitalium Antibiotic Resistance–Mediating Mutations in Canadian Women With or Without Chlamydia Trachomatis Infection

Outbreak of Shigellosis in a Homeless Shelter With Healthcare Worker Transmission-British Columbia, April 2015

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