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Topology of protein interaction network shapes protein abundances and strengths of their functional and nonspecific interactions

Proceedings of the National Academy of Sciences - PNAS, 2011-03, Vol.108 (10), p.4258-4263

2011

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Lattice Structure and Spatial Network Models Incorporating into Simulating Human-Mediated Dispersal of the Western Conifer Seed Bug Populations in South Korea

Forests, 2023-03, Vol.14 (3), p.552

2023

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Network Analysis Using Markov Chain Applied to Wildlife Habitat Selection

Diversity (Basel), 2022-05, Vol.14 (5), p.330

2022

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Interplay between pleiotropy and secondary selection determines rise and fall of mutators in stress response

PLoS computational biology, 2010-03, Vol.6 (3), p.e1000710-e1000710

2010

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Emergence of Species in Evolutionary "Simulated Annealing"

Proceedings of the National Academy of Sciences - PNAS, 2009-02, Vol.106 (6), p.1869-1874

2009

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Cooperative folding kinetics of BBL protein and peripheral subunit-binding domain homologues

Proceedings of the National Academy of Sciences - PNAS, 2008-02, Vol.105 (7), p.2397-2402

2008

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Identification of Outlier Loci Responding to Anthropogenic and Natural Selection Pressure in Stream Insects Based on a Self-Organizing Map

Water (Basel), 2016-05, Vol.8 (5), p.188-188

2016

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Inhalation toxicity of indoor air pollutants in Drosophila melanogaster using integrated transcriptomics and computational behavior analyses

Scientific reports, 2017-06, Vol.7 (1), p.46473, Article 46473

2017

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Interplay between Pleiotropy and Secondary Selection Determines Rise and Fall of Mutators in Stress Response: e1000710

PLoS computational biology, 2010-03, Vol.6 (3)

2010

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Zebrafish (Danio rerio) movement in addressing stress to conflicting stimuli, foods and predators

Ecological modelling, 2015-06, Vol.306, p.257-267

2015

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A Self-Organizing Map of Amino Acids with Their Local Environments in Proteins by Using Pairwise-Contact Energy Parameters

Journal of the Korean Physical Society, 2005, 47(3), , pp.895-899

2005

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A one-shot germinal center model under protein structural stability constraints

Physical biology, 2013-04, Vol.10 (2), p.025001-025001

2013

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Comparative and bioinformatics analyses of pathogenic bacterial secretomes identified by mass spectrometry in Burkholderia species

The Journal of Microbiology, 2017, 55(7), , pp.568-582

2017

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Characteristics of Dynamical Phase Transitions in Neural Networks

Sae mulli, 2013-12, Vol.63 (12), p.1389-1393

2013

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Diversity Against Adversity: How Adaptive Immune System Evolves Potent Antibodies

Journal of statistical physics, 2011-07, Vol.144 (2), p.241-267

2011

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Cooperative Folding Kinetics of BBL Protein and Peripheral Subunit-Binding Domain Homologues

Biophysical journal, 2010-01, Vol.98 (3), p.635a-635a

2010

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Subsequent application of self-organizing map and hidden Markov models infer community states of stream benthic macroinvertebrates

Journal of ecology and environment, 2015, Vol.38 (1), p.95-107

2015

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Subsequent application of self-organizing map and hidden Markov models infer community states of stream benthic macroinvertebrates

Journal of Ecology and Environment, 2015, 38(1), , pp.95-107

2015

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Directional adjacency-score function for protein fold recognition

Interdisciplinary bio central, 2009-06, Vol.1 (2), p.1-6

2009

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Double Transitions and Temperature-Independent Coarsening Dynamics of the Coupled XY-Ising Model

Journal of the Korean Physical Society, 2008, 53(2), , pp.527-532

2008

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A Self-Organizing Map of Amino Acids with Their Local Environments in Proteins by Using Pairwise-Contact Energy Parameters

Journal of the Korean Physical Society, 2005-11, p.895-899

2005

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CLASSIFICATIONS OF AMINO ACIDS IN PROTEINS BY THE SELF-ORGANIZING MAP

International journal of modern physics. C, Computational physics, physical computation, 2005-10, Vol.16 (10), p.1609-1616

2005

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Extension of the pairwise-contact energy parameters for proteins with the local environments of amino acids

Physica A, 2005-06, Vol.351 (2), p.439-447

2005

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NONSYMMETRIC TWO-BODY SCORE FUNCTION FOR PROTEIN FOLD RECOGNITION: NEXT NEAREST NEIGHBOR-ADJACENCY OF TWO AMINO ACIDS

International journal of modern physics. C, Computational physics, physical computation, 2004-10, Vol.15 (8), p.1087-1094

2004

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NEW METHOD OF EVALUATING RELATIVE THERMAL STABILITIES OF PROTEINS BASED ON THEIR AMINO ACID SEQUENCES: TARGETSTAR

International journal of modern physics. C, Computational physics, physical computation, 2007-10, Vol.18 (10), p.1513-1526

2007

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Topology of protein interaction network shapes protein abundances and strengths of their functional and nonspecific interactions

Lattice Structure and Spatial Network Models Incorporating into Simulating Human-Mediated Dispersal of the Western Conifer Seed Bug Populations in South Korea

Network Analysis Using Markov Chain Applied to Wildlife Habitat Selection

Interplay between pleiotropy and secondary selection determines rise and fall of mutators in stress response

Emergence of Species in Evolutionary "Simulated Annealing"

Cooperative folding kinetics of BBL protein and peripheral subunit-binding domain homologues

Identification of Outlier Loci Responding to Anthropogenic and Natural Selection Pressure in Stream Insects Based on a Self-Organizing Map

Inhalation toxicity of indoor air pollutants in Drosophila melanogaster using integrated transcriptomics and computational behavior analyses

Interplay between Pleiotropy and Secondary Selection Determines Rise and Fall of Mutators in Stress Response: e1000710

Zebrafish (Danio rerio) movement in addressing stress to conflicting stimuli, foods and predators

A Self-Organizing Map of Amino Acids with Their Local Environments in Proteins by Using Pairwise-Contact Energy Parameters

A one-shot germinal center model under protein structural stability constraints

Comparative and bioinformatics analyses of pathogenic bacterial secretomes identified by mass spectrometry in Burkholderia species

Characteristics of Dynamical Phase Transitions in Neural Networks

Diversity Against Adversity: How Adaptive Immune System Evolves Potent Antibodies

Cooperative Folding Kinetics of BBL Protein and Peripheral Subunit-Binding Domain Homologues

Subsequent application of self-organizing map and hidden Markov models infer community states of stream benthic macroinvertebrates

Subsequent application of self-organizing map and hidden Markov models infer community states of stream benthic macroinvertebrates

Directional adjacency-score function for protein fold recognition

Double Transitions and Temperature-Independent Coarsening Dynamics of the Coupled XY-Ising Model

A Self-Organizing Map of Amino Acids with Their Local Environments in Proteins by Using Pairwise-Contact Energy Parameters

CLASSIFICATIONS OF AMINO ACIDS IN PROTEINS BY THE SELF-ORGANIZING MAP

Extension of the pairwise-contact energy parameters for proteins with the local environments of amino acids

NONSYMMETRIC TWO-BODY SCORE FUNCTION FOR PROTEIN FOLD RECOGNITION: NEXT NEAREST NEIGHBOR-ADJACENCY OF TWO AMINO ACIDS

NEW METHOD OF EVALUATING RELATIVE THERMAL STABILITIES OF PROTEINS BASED ON THEIR AMINO ACID SEQUENCES: TARGETSTAR

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