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Predicting protein complexes from PPI data: a core-attachment approach

Journal of computational biology, 2009-02, Vol.16 (2), p.133

2009

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MetaCluster 5.0: a two-round binning approach for metagenomic data for low-abundance species in a noisy sample

Bioinformatics, 2012-09, Vol.28 (18), p.i356-i362

2012

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CONNET: Accurate Genome Consensus in Assembling Nanopore Sequencing Data via Deep Learning

iScience, 2020-05, Vol.23 (5), p.101128-101128, Article 101128

2020

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Management of plant health risks associated with processing of plant-based wastes: A review

Bioresource technology, 2009-07, Vol.100 (14), p.3431-3446

2009

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Sequence assembly using next generation sequencing data --challenges and solutions

Science China. Life sciences, 2014-11, Vol.57 (11), p.1140-1148

2014

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IDBA-MTP: A Hybrid MetaTranscriptomic Assembler Based on Protein Information

Research in Computational Molecular Biology, p.160-172

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IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth

Bioinformatics (Oxford, England), 2012-06, Vol.28 (11), p.1420-1428

2012

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Meta-IDBA: a de Novo assembler for metagenomic data

Bioinformatics, 2011-07, Vol.27 (13), p.i94-i101

2011

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Predicting drug–target interaction for new drugs using enhanced similarity measures and super-target clustering

Methods (San Diego, Calif.), 2015-07, Vol.83, p.98-104

2015

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IDBA-tran: a more robust de novo de Bruijn graph assembler for transcriptomes with uneven expression levels

Bioinformatics, 2013-07, Vol.29 (13), p.i326-i334

2013

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Effect of tissue Doppler on the accuracy of novice and expert interpreters of dobutamine echocardiography

The American journal of cardiology, 2001-08, Vol.88 (4), p.400-405

2001

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Detecting structural variations with precise breakpoints using low-depth WGS data from a single oxford nanopore MinION flowcell

Scientific reports, 2022-03, Vol.12 (1), p.4519-4519, Article 4519

2022

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IDBA – A Practical Iterative de Bruijn Graph De Novo Assembler

Research in Computational Molecular Biology, p.426-440

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A robust and accurate binning algorithm for metagenomic sequences with arbitrary species abundance ratio

Bioinformatics, 2011-06, Vol.27 (11), p.1489-1495

2011

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PERGA: a paired-end read guided de novo assembler for extending contigs using SVM and look ahead approach

PloS one, 2014-12, Vol.9 (12), p.e114253-e114253

2014

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RENET: A Deep Learning Approach for Extracting Gene-Disease Associations from Literature

Research in Computational Molecular Biology, 2019, Vol.11467, p.272-284

2019

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Non-adaptive complex group testing with multiple positive sets

Theoretical computer science, 2013-09, Vol.505, p.11-18

2013

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MetaCluster 4.0: a novel binning algorithm for NGS reads and huge number of species

Journal of computational biology, 2012-02, Vol.19 (2), p.241

2012

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misFinder: identify mis-assemblies in an unbiased manner using reference and paired-end reads

BMC bioinformatics, 2015-11, Vol.16 (386), p.386-386, Article 386

2015

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IDBA-MT: de novo assembler for metatranscriptomic data generated from next-generation sequencing technology

Journal of computational biology, 2013-07, Vol.20 (7), p.540

2013

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IDBA-MTP: A Hybrid Metatranscriptomic Assembler Based on Protein Information

Journal of computational biology, 2015-05, Vol.22 (5), p.367

2015

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An efficient motif discovery algorithm with unknown motif length and number of binding sites

International journal of data mining and bioinformatics, 2006, Vol.1 (2), p.201

2006

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Deterministic polynomial-time algorithms for designing short DNA words

Theoretical computer science, 2013-07, Vol.494, p.144-160

2013

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Factors Associated with Psychosis among Patients with Severe Acute Respiratory Syndrome: A Case-Control Study

Clinical infectious diseases, 2004-10, Vol.39 (8), p.1247-1249

2004

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Whole Genome Sequencing On Donor Cell Leukemia in a Patient with Multiple Myeloma Identified Gene Mutations That May Provide Insights to Leukemogenesis

Blood, 2012-11, Vol.120 (21), p.2414-2414

2012

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Predicting protein complexes from PPI data: a core-attachment approach

MetaCluster 5.0: a two-round binning approach for metagenomic data for low-abundance species in a noisy sample

CONNET: Accurate Genome Consensus in Assembling Nanopore Sequencing Data via Deep Learning

Management of plant health risks associated with processing of plant-based wastes: A review

Sequence assembly using next generation sequencing data --challenges and solutions

IDBA-MTP: A Hybrid MetaTranscriptomic Assembler Based on Protein Information

IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth

Meta-IDBA: a de Novo assembler for metagenomic data

Predicting drug–target interaction for new drugs using enhanced similarity measures and super-target clustering

IDBA-tran: a more robust de novo de Bruijn graph assembler for transcriptomes with uneven expression levels

Effect of tissue Doppler on the accuracy of novice and expert interpreters of dobutamine echocardiography

Detecting structural variations with precise breakpoints using low-depth WGS data from a single oxford nanopore MinION flowcell

IDBA – A Practical Iterative de Bruijn Graph De Novo Assembler

A robust and accurate binning algorithm for metagenomic sequences with arbitrary species abundance ratio

PERGA: a paired-end read guided de novo assembler for extending contigs using SVM and look ahead approach

RENET: A Deep Learning Approach for Extracting Gene-Disease Associations from Literature

Non-adaptive complex group testing with multiple positive sets

MetaCluster 4.0: a novel binning algorithm for NGS reads and huge number of species

misFinder: identify mis-assemblies in an unbiased manner using reference and paired-end reads

IDBA-MT: de novo assembler for metatranscriptomic data generated from next-generation sequencing technology

IDBA-MTP: A Hybrid Metatranscriptomic Assembler Based on Protein Information

An efficient motif discovery algorithm with unknown motif length and number of binding sites

Deterministic polynomial-time algorithms for designing short DNA words

Factors Associated with Psychosis among Patients with Severe Acute Respiratory Syndrome: A Case-Control Study

Whole Genome Sequencing On Donor Cell Leukemia in a Patient with Multiple Myeloma Identified Gene Mutations That May Provide Insights to Leukemogenesis

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