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A Genetically Encoded, Phage‐Displayed Cyclic‐Peptide Library

Angewandte Chemie International Edition, 2019-10, Vol.58 (44), p.15904-15909

International ed. in English, 2019

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A Quick Route to Multiple Highly Potent SARS‐CoV‐2 Main Protease Inhibitors

ChemMedChem, 2021-03, Vol.16 (6), p.942-948

2021

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Structural and functional insights into the bona fide catalytic state of Streptococcus pyogenes Cas9 HNH nuclease domain

eLife, 2019-07, Vol.8

2019

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Probing Protein Allostery as a Residue-Specific Concept via Residue Response Maps

Journal of chemical information and modeling, 2019-11, Vol.59 (11), p.4691-4705

2019

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Filtering out Low-Affinity Bitropic Ligands for Dopamine Receptors Based on Ligand Conformation

ACS chemical neuroscience, 2020-09, Vol.11 (17), p.2523-2527

2020

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Factors Governing Selectivity of Dopamine Receptor Binding Compounds for D2R and D3R Subtypes

Journal of chemical information and modeling, 2021-06, Vol.61 (6), p.2829-2843

2021

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A Genetically Encoded, Phage‐Displayed Cyclic‐Peptide Library

Angewandte Chemie, 2019-10, Vol.131 (44), p.16051-16056

2019

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Consensus Conformations of Dinucleoside Monophosphates Described with Well-Converged Molecular Dynamics Simulations

Journal of chemical theory and computation, 2018-03, Vol.14 (3), p.1456-1470

2018

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Stress and interferon signalling-mediated apoptosis contributes to pleiotropic anticancer responses induced by targeting NGLY1

British journal of cancer, 2018-12, Vol.119 (12), p.1538-1551

2018

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Computational Assessment of Potassium and Magnesium Ion Binding to a Buried Pocket in GTPase-Associating Center RNA

The journal of physical chemistry. B, 2017-01, Vol.121 (3), p.451-462

2017

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Analogues of Arylamide Phenylpiperazine Ligands To Investigate the Factors Influencing D3 Dopamine Receptor Bitropic Binding and Receptor Subtype Selectivity

ACS chemical neuroscience, 2018-12, Vol.9 (12), p.2972-2983

2018

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Structural and Energetic Analysis of 2‑Aminobenzimidazole Inhibitors in Complex with the Hepatitis C Virus IRES RNA Using Molecular Dynamics Simulations

Journal of chemical information and modeling, 2014-06, Vol.54 (6), p.1758-1772

2014

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Investigating the ion dependence of the first unfolding step of GTPase-Associating Center ribosomal RNA

Journal of biomolecular structure & dynamics, 2018-01, Vol.36 (1), p.243-253

2018

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Allosteric Modulation of Small Molecule Drugs on ACE2 Conformational Change upon Binding to SARS-CoV-2 Spike Protein

2021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM), 2021, p.2587-2594

2021

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Abstract 3048: Targeting protein deglycosylation as a newly identified vulnerable point in melanoma

Cancer research (Chicago, Ill.), 2019-07, Vol.79 (13_Supplement), p.3048-3048

2019

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Non-linear quantitative structure–activity relationship for adenine derivatives as competitive inhibitors of adenosine deaminase

Biochemical and biophysical research communications, 2005-12, Vol.338 (2), p.1137-1142

2005

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Abstract A28: Identification of NGLY1-mediated protein deglycosylation as a vulnerable point in melanoma

Cancer research (Chicago, Ill.), 2020-10, Vol.80 (19_Supplement), p.A28-A28

2020

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Novel Use of Hypoxia-Inducible Polymerizable Protein to Augment Chemotherapy for Pancreatic Cancer

Pharmaceutics, 2022-01, Vol.14 (1), p.128

2022

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Design, synthesis, and evaluation of N-(4-(4-phenyl piperazin-1-yl)butyl)-4-(thiophen-3-yl)benzamides as selective dopamine D3 receptor ligands

Bioorganic & medicinal chemistry letters, 2019-09, Vol.29 (18), p.2690-2694

2019

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Design, synthesis, and evaluation of N-(4-(4-phenyl piperazin-1-yl)butyl)-4-(thiophen-3-yl)benzamides as selective dopamine D 3 receptor ligands

Bioorganic & medicinal chemistry letters, 2019-09, Vol.29 (18), p.2690

2019

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Novel hybrid method for the evaluation of parameters contributing in determination of protein structural classes

Journal of theoretical biology, 2007-01, Vol.244 (2), p.275-281

2007

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QSARs and activity predicting models for competitive inhibitors of adenosine deaminase

FEBS letters, 2007-02, Vol.581 (3), p.506-514

2007

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The effect of atomistic interactions on RNA conformational distributions, folding and ligand binding via molecular dynamics simulations and docking

Sadat Hayatshahi, Sayyed Hamed

2016

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A novel hybrid method of beta-turn identification in protein using binary logistic regression and neural network

EXCLI journal, 2012, Vol.11, p.346-356

2012

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Non-linear quantitative structure-activity relationship for adenine derivatives as competitive inhibitors of adenosine deaminase

Biochemical and biophysical research communications, 2005-12, Vol.338 (2)

2005

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A Genetically Encoded, Phage‐Displayed Cyclic‐Peptide Library

A Quick Route to Multiple Highly Potent SARS‐CoV‐2 Main Protease Inhibitors

Structural and functional insights into the bona fide catalytic state of Streptococcus pyogenes Cas9 HNH nuclease domain

Probing Protein Allostery as a Residue-Specific Concept via Residue Response Maps

Filtering out Low-Affinity Bitropic Ligands for Dopamine Receptors Based on Ligand Conformation

Factors Governing Selectivity of Dopamine Receptor Binding Compounds for D2R and D3R Subtypes

A Genetically Encoded, Phage‐Displayed Cyclic‐Peptide Library

Consensus Conformations of Dinucleoside Monophosphates Described with Well-Converged Molecular Dynamics Simulations

Stress and interferon signalling-mediated apoptosis contributes to pleiotropic anticancer responses induced by targeting NGLY1

Computational Assessment of Potassium and Magnesium Ion Binding to a Buried Pocket in GTPase-Associating Center RNA

Analogues of Arylamide Phenylpiperazine Ligands To Investigate the Factors Influencing D3 Dopamine Receptor Bitropic Binding and Receptor Subtype Selectivity

Structural and Energetic Analysis of 2‑Aminobenzimidazole Inhibitors in Complex with the Hepatitis C Virus IRES RNA Using Molecular Dynamics Simulations

Investigating the ion dependence of the first unfolding step of GTPase-Associating Center ribosomal RNA

Allosteric Modulation of Small Molecule Drugs on ACE2 Conformational Change upon Binding to SARS-CoV-2 Spike Protein

Abstract 3048: Targeting protein deglycosylation as a newly identified vulnerable point in melanoma

Non-linear quantitative structure–activity relationship for adenine derivatives as competitive inhibitors of adenosine deaminase

Abstract A28: Identification of NGLY1-mediated protein deglycosylation as a vulnerable point in melanoma

Novel Use of Hypoxia-Inducible Polymerizable Protein to Augment Chemotherapy for Pancreatic Cancer

Design, synthesis, and evaluation of N-(4-(4-phenyl piperazin-1-yl)butyl)-4-(thiophen-3-yl)benzamides as selective dopamine D3 receptor ligands

Design, synthesis, and evaluation of N-(4-(4-phenyl piperazin-1-yl)butyl)-4-(thiophen-3-yl)benzamides as selective dopamine D 3 receptor ligands

Novel hybrid method for the evaluation of parameters contributing in determination of protein structural classes

QSARs and activity predicting models for competitive inhibitors of adenosine deaminase

The effect of atomistic interactions on RNA conformational distributions, folding and ligand binding via molecular dynamics simulations and docking

A novel hybrid method of beta-turn identification in protein using binary logistic regression and neural network

Non-linear quantitative structure-activity relationship for adenine derivatives as competitive inhibitors of adenosine deaminase

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