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Alignment-free phylogenetics and population genetics

Briefings in bioinformatics, 2014-05, Vol.15 (3), p.407-418

Haubold, B.

2014

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Genetic isolation by distance in Arabidopsis thaliana: biogeography and postglacial colonization of Europe

Molecular ecology, 2000-12, Vol.9 (12), p.2109-2118

2000

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Approximate Genealogies Under Genetic Hitchhiking

Genetics (Austin), 2006-12, Vol.174 (4), p.1995-2008

2006

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Bioinformatics for Evolutionary Biologists: A Problems Approach

Second edition, 2023

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Comparative evolutionary analysis of chalcone synthase and alcohol dehydrogenase loci in Arabidopsis, Arabis, and related genera (Brassicaceae)

Molecular biology and evolution, 2000-10, Vol.17 (10), p.1483-1498

2000

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LIAN 3.0: detecting linkage disequilibrium in multilocus data

Bioinformatics, 2000-09, Vol.16 (9), p.847-849

2000

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Molecular systematics of the Brassicaceae: evidence from coding plastidic matK and nuclear Chs sequences

American journal of botany, 2001-03, Vol.88 (3), p.534-544

2001

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Estimating mutation distances from unaligned genomes

Journal of computational biology, 2009-10, Vol.16 (10), p.1487-1500

2009

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Microsatellite markers reveal a spectrum of population structures in the malaria parasite Plasmodium falciparum

Molecular biology and evolution, 2000-10, Vol.17 (10), p.1467-1482

2000

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Genome comparison without alignment using shortest unique substrings

BMC bioinformatics, 2005-05, Vol.6 (1), p.123-123, Article 123

2005

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Genetic and ecotypic structure of a fluorescent Pseudomonas population

Molecular ecology, 1996-12, Vol.5 (6), p.747-761

1996

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Identification of Farnesoid X Receptor β as a Novel Mammalian Nuclear Receptor Sensing Lanosterol

Molecular and Cellular Biology, 2003-02, Vol.23 (3), p.864-872

2003

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The value of bone scintigraphy, bone marrow scintigraphy and fast spin-echo magnetic resonance imaging in staging of patients with malignant solid tumours: a prospective study

European Journal of Nuclear Medicine, 1993-11, Vol.20 (11), p.1063

1993

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A Robust Topology-Based Algorithm for Gene Expression Profiling

ISRN Bioinformatics, 2012, Vol.2012 (2012), p.1-11

2012

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NucVoter: A Voting Algorithm for Reliable Nucleosome Prediction Using Next-Generation Sequencing Data

ISRN Bioinformatics, 2013-11, Vol.2013, p.1-9

2013

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Comparative genomics and regulatory evolution: conservation and function of the Chs and Apetala3 promoters

Molecular biology and evolution, 2001-10, Vol.18 (10), p.1882-1891

2001

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IsoPlotter+: A Tool for Studying the Compositional Architecture of Genomes

ISRN Bioinformatics, 2013-04, Vol.2013, p.1-6

2013

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Detecting Linkage Disequilibrium in Bacterial Populations

Genetics (Austin), 1998-12, Vol.150 (4), p.1341-1348

1998

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Recombination and Gene Conversion in a 170-kb Genomic Region of Arabidopsis thaliana

Genetics (Austin), 2002-07, Vol.161 (3), p.1269-1278

2002

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Statistics of divergence times

Molecular biology and evolution, 2001-07, Vol.18 (7), p.1157-1160

2001

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A Systolic Array-Based FPGA Parallel Architecture for the BLAST Algorithm

ISRN Bioinformatics, 2012, Vol.2012 (2012), p.1-11

2012

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Bacterial genomics and adaptation to life on plants: implications for the evolution of pathogenicity and symbiosis

Current opinion in microbiology, 1998-10, Vol.1 (5), p.589-597

1998

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Towards an Understanding of the Population Genetics of Plant-Colonizing Bacteria

Advances in Botanical Research, 1997, Vol.24, p.335-351

1997

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Calculating the SNP-effective sample size from an alignment

Bioinformatics, 2002-01, Vol.18 (1), p.36-38

2002

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LIAN 3.0: detecting linkage disequilibrium in multilocus data. Linkage Analysis

Bioinformatics (Oxford, England), 2000-09, Vol.16 (9), p.847-848

2000

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Alignment-free phylogenetics and population genetics

Genetic isolation by distance in Arabidopsis thaliana: biogeography and postglacial colonization of Europe

Approximate Genealogies Under Genetic Hitchhiking

Bioinformatics for Evolutionary Biologists: A Problems Approach

Comparative evolutionary analysis of chalcone synthase and alcohol dehydrogenase loci in Arabidopsis, Arabis, and related genera (Brassicaceae)

LIAN 3.0: detecting linkage disequilibrium in multilocus data

Molecular systematics of the Brassicaceae: evidence from coding plastidic matK and nuclear Chs sequences

Estimating mutation distances from unaligned genomes

Microsatellite markers reveal a spectrum of population structures in the malaria parasite Plasmodium falciparum

Genome comparison without alignment using shortest unique substrings

Genetic and ecotypic structure of a fluorescent Pseudomonas population

Identification of Farnesoid X Receptor β as a Novel Mammalian Nuclear Receptor Sensing Lanosterol

The value of bone scintigraphy, bone marrow scintigraphy and fast spin-echo magnetic resonance imaging in staging of patients with malignant solid tumours: a prospective study

A Robust Topology-Based Algorithm for Gene Expression Profiling

NucVoter: A Voting Algorithm for Reliable Nucleosome Prediction Using Next-Generation Sequencing Data

Comparative genomics and regulatory evolution: conservation and function of the Chs and Apetala3 promoters

IsoPlotter+: A Tool for Studying the Compositional Architecture of Genomes

Detecting Linkage Disequilibrium in Bacterial Populations

Recombination and Gene Conversion in a 170-kb Genomic Region of Arabidopsis thaliana

Statistics of divergence times

A Systolic Array-Based FPGA Parallel Architecture for the BLAST Algorithm

Bacterial genomics and adaptation to life on plants: implications for the evolution of pathogenicity and symbiosis

Towards an Understanding of the Population Genetics of Plant-Colonizing Bacteria

Calculating the SNP-effective sample size from an alignment

LIAN 3.0: detecting linkage disequilibrium in multilocus data. Linkage Analysis

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