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Peptide-Protein Interaction Studies of Antimicrobial Peptides Targeting Middle East Respiratory Syndrome Coronavirus Spike Protein: An In Silico Approach

Advances in bioinformatics, 2019, Vol.2019, p.6815105-16

2019

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Immunoinformatics Approach for Multiepitopes Vaccine Prediction against Glycoprotein B of Avian Infectious Laryngotracheitis Virus

Advances in bioinformatics, 2019, Vol.2019, p.1270485-23

2019

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Novel Deleterious nsSNPs within MEFV Gene that Could Be Used as Diagnostic Markers to Predict Hereditary Familial Mediterranean Fever: Using Bioinformatics Analysis

Advances in bioinformatics, 2019, Vol.2019, p.1651587-13

2019

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Algorithms and Methods in Structural Bioinformatics

1, 2022

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Integrating Rigidity Analysis into the Exploration of Protein Conformational Pathways Using RRT and MC

Molecules (Basel, Switzerland), 2021-04, Vol.26 (8), p.2329

2021

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Elucidating Cancer Subtypes by Using the Relationship between DNA Methylation and Gene Expression

Genes, 2024-05, Vol.15 (5), p.631

2024

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Detecting intermediate protein conformations using algebraic topology

BMC bioinformatics, 2017-12, Vol.18 (Suppl 15), p.502-502, Article 502

2017

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Characterizing Protein Conformational Spaces using Efficient Data Reduction and Algebraic Topology

Journal of Human, Earth, and Future, 2022-05, Vol.3, p.1-21

2022

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Active and Inactive Cdc42 Differ in Their Insert Region Conformational Dynamics

Biophysical journal, 2021-01, Vol.120 (2), p.306-318

2021

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Allosteric Activation of RhoA Complexed with p115-RhoGEF Deciphered by Conformational Dynamics

Journal of chemical information and modeling, 2024-02, Vol.64 (3), p.862-873

2024

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Patch-DCA: improved protein interface prediction by utilizing structural information and clustering DCA scores

Bioinformatics, 2020-03, Vol.36 (5), p.1460-1467

2020

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Methods for Detecting Critical Residues in Proteins

Methods in molecular biology (Clifton, N.J.), 2017, Vol.1498, p.227

2017

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Editorial: Computational data-driven design and modeling of biomolecules and biomimetics

Biophysical chemistry, 2022-10, Vol.289, p.106877-106877, Article 106877

2022

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Agent-Based Deterministic Modeling of the Bone Marrow Homeostasis

Advances in Bioinformatics, 2016, Vol.2016, p.8054219-12

2016

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Algorithms and Methods in Structural Bioinformatics

2012

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Clustering of Protein Conformations Using Parallelized Dimensionality Reduction

Journal of advances in information technology, 2019, Vol.10 (4), p.142-147

2019

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The Stability and Dynamics of the Human Calcitonin Amyloid Peptide DFNKF

Biophysical journal, 2004-07, Vol.87 (1), p.146-158

2004

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Predicting the Effect of Single and Multiple Mutations on Protein Structural Stability

Molecules (Basel, Switzerland), 2018-01, Vol.23 (2), p.251

2018

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Preface: Selected Articles from 2015 Computational Structural Bioinformatics Workshop

Journal of computational biology, 2017-01, Vol.24 (1), p.1

2017

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Machine Learning Approaches for Predicting Protein Complex Similarity

Journal of computational biology, 2017-01, Vol.24 (1), p.40

2017

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Accurate Prediction of Docked Protein Structure Similarity

Journal of computational biology, 2015-09, Vol.22 (9), p.892

2015

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A Protocol for the Design of Protein and Peptide Nanostructure Self-Assemblies Exploiting Synthetic Amino Acids

Methods in molecular biology (Clifton, N.J.), 2017, Vol.1529, p.323

2017

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Binding of a C-End Rule Peptide to the Neuropilin-1 Receptor: A Molecular Modeling Approach

Biochemistry (Easton), 2011-03, Vol.50 (10), p.1755-1762

2011

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Protein hormone fragmentation in intercellular signaling: hormones as nested information systems

Biology of reproduction, 2021-04, Vol.104 (4), p.887-901

2021

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Introduction to selected papers from the 8th International Conference on Bioinformatics and Computational Biology (BICOB 2016)

Journal of bioinformatics and computational biology, 2017-06, Vol.15 (3), p.1702002

2017

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Peptide-Protein Interaction Studies of Antimicrobial Peptides Targeting Middle East Respiratory Syndrome Coronavirus Spike Protein: An In Silico Approach

Immunoinformatics Approach for Multiepitopes Vaccine Prediction against Glycoprotein B of Avian Infectious Laryngotracheitis Virus

Novel Deleterious nsSNPs within MEFV Gene that Could Be Used as Diagnostic Markers to Predict Hereditary Familial Mediterranean Fever: Using Bioinformatics Analysis

Algorithms and Methods in Structural Bioinformatics

Integrating Rigidity Analysis into the Exploration of Protein Conformational Pathways Using RRT and MC

Elucidating Cancer Subtypes by Using the Relationship between DNA Methylation and Gene Expression

Detecting intermediate protein conformations using algebraic topology

Characterizing Protein Conformational Spaces using Efficient Data Reduction and Algebraic Topology

Active and Inactive Cdc42 Differ in Their Insert Region Conformational Dynamics

Allosteric Activation of RhoA Complexed with p115-RhoGEF Deciphered by Conformational Dynamics

Patch-DCA: improved protein interface prediction by utilizing structural information and clustering DCA scores

Methods for Detecting Critical Residues in Proteins

Editorial: Computational data-driven design and modeling of biomolecules and biomimetics

Agent-Based Deterministic Modeling of the Bone Marrow Homeostasis

Algorithms and Methods in Structural Bioinformatics

Clustering of Protein Conformations Using Parallelized Dimensionality Reduction

The Stability and Dynamics of the Human Calcitonin Amyloid Peptide DFNKF

Predicting the Effect of Single and Multiple Mutations on Protein Structural Stability

Preface: Selected Articles from 2015 Computational Structural Bioinformatics Workshop

Machine Learning Approaches for Predicting Protein Complex Similarity

Accurate Prediction of Docked Protein Structure Similarity

A Protocol for the Design of Protein and Peptide Nanostructure Self-Assemblies Exploiting Synthetic Amino Acids

Binding of a C-End Rule Peptide to the Neuropilin-1 Receptor: A Molecular Modeling Approach

Protein hormone fragmentation in intercellular signaling: hormones as nested information systems

Introduction to selected papers from the 8th International Conference on Bioinformatics and Computational Biology (BICOB 2016)

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