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Plasmid fitness costs are caused by specific genetic conflicts enabling resolution by compensatory mutation

PLoS biology, 2021-10, Vol.19 (10), p.e3001225-e3001225

2021

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Sampling the mobile gene pool: innovation via horizontal gene transfer in bacteria

Philosophical transactions of the Royal Society of London. Series B. Biological sciences, 2017-12, Vol.372 (1735), p.20160424

2017

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A megaplasmid family driving dissemination of multidrug resistance in Pseudomonas

Nature communications, 2020-03, Vol.11 (1), p.1370-13, Article 1370

2020

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Is the bacterial chromosome a mobile genetic element?

Nature communications, 2021-11, Vol.12 (1), p.6400-6400, Article 6400

Hall, James P J

2021

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Identification of Low- and High-Impact Hemagglutinin Amino Acid Substitutions That Drive Antigenic Drift of Influenza A(H1N1) Viruses

PLoS pathogens, 2016-04, Vol.12 (4), p.e1005526

2016

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Exploiting lung adaptation and phage steering to clear pan-resistant Pseudomonas aeruginosa infections in vivo

Nature communications, 2024-02, Vol.15 (1), p.1547-1547, Article 1547

2024

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Plasmids manipulate bacterial behaviour through translational regulatory crosstalk

PLoS biology, 2023-02, Vol.21 (2), p.e3001988-e3001988

2023

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Positive Selection Inhibits Plasmid Coexistence in Bacterial Genomes

mBio, 2021-05, Vol.12 (3)

2021

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Application of long read sequencing to determine expressed antigen diversity in Trypanosoma brucei infections

PLoS neglected tropical diseases, 2019-04, Vol.13 (4), p.e0007262-e0007262

2019

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Source–sink plasmid transfer dynamics maintain gene mobility in soil bacterial communities

Proceedings of the National Academy of Sciences - PNAS, 2016-07, Vol.113 (29), p.8260-8265

2016

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Mosaic VSGs and the scale of Trypanosoma brucei antigenic variation

PLoS pathogens, 2013-07, Vol.9 (7), p.e1003502-e1003502

2013

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The proficiency of the original host species determines community-level plasmid dynamics

FEMS microbiology ecology, 2021-04, Vol.97 (4), p.1

2021

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Horizontal gene transfer and ecological interactions jointly control microbiome stability

PLoS biology, 2022-11, Vol.20 (11), p.e3001847

2022

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Mobile Compensatory Mutations Promote Plasmid Survival

mSystems, 2019-01, Vol.4 (1)

2019

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Gene mobility promotes the spread of resistance in bacterial populations

The ISME Journal, 2017-08, Vol.11 (8), p.1930-1932

2017

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Extremely fast amelioration of plasmid fitness costs by multiple functionally diverse pathways

Microbiology (Society for General Microbiology), 2020-01, Vol.166 (1), p.56-62

2020

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Plasmid stability is enhanced by higher-frequency pulses of positive selection

Proceedings of the Royal Society. B, Biological sciences, 2018-01, Vol.285 (1870), p.20172497-20172497

Royal Society (Great Britain), 2018

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Environmentally co‐occurring mercury resistance plasmids are genetically and phenotypically diverse and confer variable context‐dependent fitness effects

Environmental microbiology, 2015-12, Vol.17 (12), p.5008-5022

2015

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IMG/PR: a database of plasmids from genomes and metagenomes with rich annotations and metadata

Nucleic acids research, 2024-01, Vol.52 (D1), p.D164-D173

2024

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Migration promotes plasmid stability under spatially heterogeneous positive selection

Proceedings of the Royal Society. B, Biological sciences, 2018-05, Vol.285 (1879), p.20180324-20180324

Royal Society (Great Britain), 2018

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The Impact of Mercury Selection and Conjugative Genetic Elements on Community Structure and Resistance Gene Transfer

Frontiers in microbiology, 2020-08, Vol.11, p.1846-1846

2020

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The Ecology and Evolution of Pangenomes

Current biology, 2019-10, Vol.29 (20), p.R1094-R1103

2019

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Multi-host environments select for host-generalist conjugative plasmids

BMC evolutionary biology, 2016-04, Vol.16 (1), p.70, Article 70

2016

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Positive selection inhibits gene mobilization and transfer in soil bacterial communities

Nature ecology & evolution, 2017-09, Vol.1 (9), p.1348-1353

2017

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What makes a megaplasmid?

Philosophical transactions of the Royal Society of London. Series B. Biological sciences, 2022-01, Vol.377 (1842), p.20200472

2022

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Plasmid fitness costs are caused by specific genetic conflicts enabling resolution by compensatory mutation

Sampling the mobile gene pool: innovation via horizontal gene transfer in bacteria

A megaplasmid family driving dissemination of multidrug resistance in Pseudomonas

Is the bacterial chromosome a mobile genetic element?

Identification of Low- and High-Impact Hemagglutinin Amino Acid Substitutions That Drive Antigenic Drift of Influenza A(H1N1) Viruses

Exploiting lung adaptation and phage steering to clear pan-resistant Pseudomonas aeruginosa infections in vivo

Plasmids manipulate bacterial behaviour through translational regulatory crosstalk

Positive Selection Inhibits Plasmid Coexistence in Bacterial Genomes

Application of long read sequencing to determine expressed antigen diversity in Trypanosoma brucei infections

Source–sink plasmid transfer dynamics maintain gene mobility in soil bacterial communities

Mosaic VSGs and the scale of Trypanosoma brucei antigenic variation

The proficiency of the original host species determines community-level plasmid dynamics

Horizontal gene transfer and ecological interactions jointly control microbiome stability

Mobile Compensatory Mutations Promote Plasmid Survival

Gene mobility promotes the spread of resistance in bacterial populations

Extremely fast amelioration of plasmid fitness costs by multiple functionally diverse pathways

Plasmid stability is enhanced by higher-frequency pulses of positive selection

Environmentally co‐occurring mercury resistance plasmids are genetically and phenotypically diverse and confer variable context‐dependent fitness effects

IMG/PR: a database of plasmids from genomes and metagenomes with rich annotations and metadata

Migration promotes plasmid stability under spatially heterogeneous positive selection

The Impact of Mercury Selection and Conjugative Genetic Elements on Community Structure and Resistance Gene Transfer

The Ecology and Evolution of Pangenomes

Multi-host environments select for host-generalist conjugative plasmids

Positive selection inhibits gene mobilization and transfer in soil bacterial communities

What makes a megaplasmid?

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