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A Scalable Approach for Protein False Discovery Rate Estimation in Large Proteomic Data Sets[S]

Molecular & cellular proteomics, 2015-09, Vol.14 (9), p.2394-2404

2015

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A deep proteome and transcriptome abundance atlas of 29 healthy human tissues

Molecular systems biology, 2019-02, Vol.15 (2), p.e8503-n/a

2019

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Mass-spectrometry-based draft of the human proteome

Nature (London), 2014-05, Vol.509 (7502), p.582-587

2014

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Meltome atlas-thermal proteome stability across the tree of life

Nature methods, 2020-05, Vol.17 (5), p.495-503

2020

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High-fat diet alters gut microbiota physiology in mice

The ISME Journal, 2014-02, Vol.8 (2), p.295-308

2014

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Global Proteome Analysis of the NCI-60 Cell Line Panel

Cell reports (Cambridge), 2013-08, Vol.4 (3), p.609-620

2013

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Mining the Human Tissue Proteome for Protein Citrullination

Molecular & cellular proteomics, 2018-07, Vol.17 (7), p.1378-1391

2018

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Discovery of O-GlcNAc-modified Proteins in Published Large-scale Proteome Data

Molecular & cellular proteomics, 2012-10, Vol.11 (10), p.843-850

2012

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Quantification and discovery of sequence determinants of protein‐per‐mRNA amount in 29 human tissues

Molecular systems biology, 2019-02, Vol.15 (2), p.e8513-n/a

2019

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Enterococcus faecalis Metalloprotease Compromises Epithelial Barrier and Contributes to Intestinal Inflammation

Gastroenterology (New York, N.Y. 1943), 2011-09, Vol.141 (3), p.959-971

2011

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A Comprehensive Proteomics and Transcriptomics Analysis of Bacillus subtilis Salt Stress Adaptation

Journal of Bacteriology, 2010-02, Vol.192 (3), p.870-882

2010

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Protease signaling through protease activated receptor 1 mediate nerve activation by mucosal supernatants from irritable bowel syndrome but not from ulcerative colitis patients

PloS one, 2018-03, Vol.13 (3), p.e0193943-e0193943

2018

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Massenspektrometrie-basierte Proteinforschung

Biospektrum, 2015-02, Vol.21 (1), p.32-35

2015

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A Novel Two-Stage Tandem Mass Spectrometry Approach and Scoring Scheme for the Identification of O-GlcNAc Modified Peptides

Journal of the American Society for Mass Spectrometry, 2011-05, Vol.22 (5), p.931-942

2011

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Bacterial Cellulose Shifts Transcriptome and Proteome of Cultured Endothelial Cells Towards Native Differentiation

Molecular & cellular proteomics, 2017-09, Vol.16 (9), p.1563-1577

2017

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Co-immunoprecipitation-based identification of putative BAX INHIBITOR-1-interacting proteins involved in cell death regulation and plant-powdery mildew interactions

Molecular plant pathology, 2013-10, Vol.14 (8), p.791-802

2013

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From complementarity to comprehensiveness - targeting the membrane proteome of growing Bacillus subtilis by divergent approaches

Proteomics (Weinheim), 2008-10, Vol.8 (19), p.4123-4136

2008

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Complementary Analysis of the Vegetative Membrane Proteome of the Human Pathogen Staphylococcus aureus

Molecular & cellular proteomics, 2008-08, Vol.7 (8), p.1460-1468

2008

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MALDI imaging mass spectrometry for in situ proteomic analysis of preneoplastic lesions in pancreatic cancer

PloS one, 2012-06, Vol.7 (6), p.e39424-e39424

2012

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Semi-supervised Learning Predicts Approximately One Third of the Alternative Splicing Isoforms as Functional Proteins

Cell reports (Cambridge), 2015-07, Vol.12 (2), p.183-189

2015

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Combined proteomics/miRNomics of dendritic cell immunotherapy-treated glioblastoma patients as a screening for survival-associated factors

npj vaccines, 2020-01, Vol.5 (1), p.5-5, Article 5

2020

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Discovery of O-GlcNAc-6-phosphate Modified Proteins in Large-scale Phosphoproteomics Data

Molecular & cellular proteomics, 2012-10, Vol.11 (10), p.1063-1069

2012

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DMSO enhances electrospray response, boosting sensitivity of proteomic experiments

Nature methods, 2013-10, Vol.10 (10), p.989-991

2013

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The target landscape of clinical kinase drugs

Science (American Association for the Advancement of Science), 2017-12, Vol.358 (6367), p.1148-1148

2017

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Ethylene glycol improves electrospray ionization efficiency in bottom-up proteomics

Analytical and bioanalytical chemistry, 2017-02, Vol.409 (4), p.1049-1057

2017

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A Scalable Approach for Protein False Discovery Rate Estimation in Large Proteomic Data Sets[S]

A deep proteome and transcriptome abundance atlas of 29 healthy human tissues

Mass-spectrometry-based draft of the human proteome

Meltome atlas-thermal proteome stability across the tree of life

High-fat diet alters gut microbiota physiology in mice

Global Proteome Analysis of the NCI-60 Cell Line Panel

Mining the Human Tissue Proteome for Protein Citrullination

Discovery of O-GlcNAc-modified Proteins in Published Large-scale Proteome Data

Quantification and discovery of sequence determinants of protein‐per‐mRNA amount in 29 human tissues

Enterococcus faecalis Metalloprotease Compromises Epithelial Barrier and Contributes to Intestinal Inflammation

A Comprehensive Proteomics and Transcriptomics Analysis of Bacillus subtilis Salt Stress Adaptation

Protease signaling through protease activated receptor 1 mediate nerve activation by mucosal supernatants from irritable bowel syndrome but not from ulcerative colitis patients

Massenspektrometrie-basierte Proteinforschung

A Novel Two-Stage Tandem Mass Spectrometry Approach and Scoring Scheme for the Identification of O-GlcNAc Modified Peptides

Bacterial Cellulose Shifts Transcriptome and Proteome of Cultured Endothelial Cells Towards Native Differentiation

Co-immunoprecipitation-based identification of putative BAX INHIBITOR-1-interacting proteins involved in cell death regulation and plant-powdery mildew interactions

From complementarity to comprehensiveness - targeting the membrane proteome of growing Bacillus subtilis by divergent approaches

Complementary Analysis of the Vegetative Membrane Proteome of the Human Pathogen Staphylococcus aureus

MALDI imaging mass spectrometry for in situ proteomic analysis of preneoplastic lesions in pancreatic cancer

Semi-supervised Learning Predicts Approximately One Third of the Alternative Splicing Isoforms as Functional Proteins

Combined proteomics/miRNomics of dendritic cell immunotherapy-treated glioblastoma patients as a screening for survival-associated factors

Discovery of O-GlcNAc-6-phosphate Modified Proteins in Large-scale Phosphoproteomics Data

DMSO enhances electrospray response, boosting sensitivity of proteomic experiments

The target landscape of clinical kinase drugs

Ethylene glycol improves electrospray ionization efficiency in bottom-up proteomics

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