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Solvent viscosity and friction in protein folding dynamics

Current protein & peptide science, 2010-08, Vol.11 (5), p.385-395

Hagen, Stephen J

2010

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Crosstalk enables mutual activation of coupled quorum sensing pathways through “jump-start” and “push-start” mechanisms

Scientific reports, 2023-11, Vol.13 (1), p.19230-19230, Article 19230

2023

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Microfluidic study of competence regulation in Streptococcus mutans: environmental inputs modulate bimodal and unimodal expression of comX

Molecular microbiology, 2012-10, Vol.86 (2), p.258-272

2012

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Heterogeneous response to a quorum-sensing signal in the luminescence of individual Vibrio fischeri

PloS one, 2010-11, Vol.5 (11), p.e15473-e15473

2010

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The quantitative measure and statistical distribution of fame

PloS one, 2018-07, Vol.13 (7), p.e0200196-e0200196

2018

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Origins of heterogeneity in Streptococcus mutans competence: interpreting an environment-sensitive signaling pathway

Physical biology, 2017-01, Vol.14 (1), p.015001-015001

2017

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Dimension-reduction simplifies the analysis of signal crosstalk in a bacterial quorum sensing pathway

Scientific reports, 2021-10, Vol.11 (1), p.19719-19719, Article 19719

2021

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Carbohydrate and PepO control bimodality in competence development by Streptococcus mutans

Molecular microbiology, 2019-11, Vol.112 (5), p.1388-1402

2019

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Quorum Activation at a Distance: Spatiotemporal Patterns of Gene Regulation from Diffusion of an Autoinducer Signal

Journal of the American Chemical Society, 2012-03, Vol.134 (12), p.5618-5626

2012

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Characterization of LrgAB as a stationary phase-specific pyruvate uptake system in Streptococcus mutans

BMC microbiology, 2019-10, Vol.19 (1), p.223-15, Article 223

2019

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Spatial Correlations and Distribution of Competence Gene Expression in Biofilms of Streptococcus mutans

Frontiers in microbiology, 2021-01, Vol.11, p.627992-627992

2021

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Effects of Carbohydrate Source on Genetic Competence in Streptococcus mutans

Applied and environmental microbiology, 2016-08, Vol.82 (15), p.4821-4834

2016

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Multi-scaled explorations of binding-induced folding of intrinsically disordered protein inhibitor IA3 to its target enzyme

PLoS computational biology, 2011-04, Vol.7 (4), p.e1001118-e1001118

2011

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Modeling Analysis of Signal Sensitivity and Specificity by Vibrio fischeri LuxR Variants

PloS one, 2015-05, Vol.10 (5), p.e0126474-e0126474

2015

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Folding Dynamics and Pathways of the Trp-Cage Miniproteins

Biochemistry (Easton), 2014-09, Vol.53 (38), p.6011-6021

2014

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Environmental Triggers of lrgA Expression in Streptococcus mutans

Frontiers in microbiology, 2020-01, Vol.11, p.18-18

2020

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Trp Zipper Folding Kinetics by Molecular Dynamics and Temperature-Jump Spectroscopy

Proceedings of the National Academy of Sciences - PNAS, 2004-03, Vol.101 (12), p.4077-4082

2004

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Kinetics of Folding and Binding of an Intrinsically Disordered Protein: The Inhibitor of Yeast Aspartic Proteinase YPrA

Journal of the American Chemical Society, 2008-08, Vol.130 (34), p.11477-11485

2008

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Do Protein Molecules Unfold in a Simple Shear Flow?

Biophysical journal, 2006-11, Vol.91 (9), p.3415-3424

2006

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Internal Friction Controls the Speed of Protein Folding from a Compact Configuration

Biochemistry (Easton), 2004-10, Vol.43 (39), p.12532-12538

2004

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Noise and crosstalk in two quorum-sensing inputs of Vibrio fischeri

BMC systems biology, 2011-09, Vol.5 (147), p.153-153, Article 153

2011

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Oxidative Stressors Modify the Response of Streptococcus mutans to Its Competence Signal Peptides

Applied and environmental microbiology, 2017-11, Vol.83 (22), p.1

2017

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Sharply Tuned pH Response of Genetic Competence Regulation in Streptococcus mutans: a Microfluidic Study of the Environmental Sensitivity of comX

Applied and Environmental Microbiology, 2015-08, Vol.81 (16), p.5622-5631

2015

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Genome-Wide Screens Reveal New Gene Products That Influence Genetic Competence in Streptococcus mutans

Journal of bacteriology, 2018-01, Vol.200 (2)

2018

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Entropy-driven motility of Sinorhizobium meliloti on a semi-solid surface

Proceedings of the Royal Society. B, Biological sciences, 2014-06, Vol.281 (1784), p.20132575-20132575

2014

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Solvent viscosity and friction in protein folding dynamics

Crosstalk enables mutual activation of coupled quorum sensing pathways through “jump-start” and “push-start” mechanisms

Microfluidic study of competence regulation in Streptococcus mutans: environmental inputs modulate bimodal and unimodal expression of comX

Heterogeneous response to a quorum-sensing signal in the luminescence of individual Vibrio fischeri

The quantitative measure and statistical distribution of fame

Origins of heterogeneity in Streptococcus mutans competence: interpreting an environment-sensitive signaling pathway

Dimension-reduction simplifies the analysis of signal crosstalk in a bacterial quorum sensing pathway

Carbohydrate and PepO control bimodality in competence development by Streptococcus mutans

Quorum Activation at a Distance: Spatiotemporal Patterns of Gene Regulation from Diffusion of an Autoinducer Signal

Characterization of LrgAB as a stationary phase-specific pyruvate uptake system in Streptococcus mutans

Spatial Correlations and Distribution of Competence Gene Expression in Biofilms of Streptococcus mutans

Effects of Carbohydrate Source on Genetic Competence in Streptococcus mutans

Multi-scaled explorations of binding-induced folding of intrinsically disordered protein inhibitor IA3 to its target enzyme

Modeling Analysis of Signal Sensitivity and Specificity by Vibrio fischeri LuxR Variants

Folding Dynamics and Pathways of the Trp-Cage Miniproteins

Environmental Triggers of lrgA Expression in Streptococcus mutans

Trp Zipper Folding Kinetics by Molecular Dynamics and Temperature-Jump Spectroscopy

Kinetics of Folding and Binding of an Intrinsically Disordered Protein: The Inhibitor of Yeast Aspartic Proteinase YPrA

Do Protein Molecules Unfold in a Simple Shear Flow?

Internal Friction Controls the Speed of Protein Folding from a Compact Configuration

Noise and crosstalk in two quorum-sensing inputs of Vibrio fischeri

Oxidative Stressors Modify the Response of Streptococcus mutans to Its Competence Signal Peptides

Sharply Tuned pH Response of Genetic Competence Regulation in Streptococcus mutans: a Microfluidic Study of the Environmental Sensitivity of comX

Genome-Wide Screens Reveal New Gene Products That Influence Genetic Competence in Streptococcus mutans

Entropy-driven motility of Sinorhizobium meliloti on a semi-solid surface

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