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COVID-19 outbreak: history, mechanism, transmission, structural studies and therapeutics

Infection, 2021-04, Vol.49 (2), p.199-213

2021

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Intelligent Computing Methodologies: 14th International Conference, ICIC 2018, Wuhan, China, August 15-18, 2018, Proceedings, Part III

1, 2018

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ProThermDB: thermodynamic database for proteins and mutants revisited after 15 years

Nucleic acids research, 2021-01, Vol.49 (D1), p.D420-D424

2021

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Intelligent Computing Methodologies: 13th International Conference, ICIC 2017, Liverpool, UK, August 7-10, 2017, Proceedings, Part III

1, 2017

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Protein–protein interactions: scoring schemes and binding affinity

Current opinion in structural biology, 2017-06, Vol.44, p.31-38

2017

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Protein-protein binding affinity prediction from amino acid sequence

Bioinformatics (Oxford, England), 2014-12, Vol.30 (24), p.3583-3589

2014

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PROXiMATE: a database of mutant protein-protein complex thermodynamics and kinetics

Bioinformatics (Oxford, England), 2017-09, Vol.33 (17), p.2787-2788

2017

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PDA-Pred: Predicting the binding affinity of protein-DNA complexes using machine learning techniques and structural features

Methods (San Diego, Calif.), 2023-05, Vol.213, p.10-17

2023

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ANuPP: A Versatile Tool to Predict Aggregation Nucleating Regions in Peptides and Proteins

Journal of molecular biology, 2021-05, Vol.433 (11), p.166707-166707, Article 166707

2021

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Neurodegenerative Diseases - Is Metabolic Deficiency the Root Cause?

Frontiers in neuroscience, 2020-03, Vol.14, p.213-213

2020

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R-SIM: A Database of Binding Affinities for RNA-small Molecule Interactions

Journal of molecular biology, 2023-07, Vol.435 (14), p.167914, Article 167914

2023

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Multi-omics-based identification of SARS-CoV-2 infection biology and candidate drugs against COVID-19

Computers in biology and medicine, 2020-11, Vol.126, p.104051-104051, Article 104051

2020

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Pred‐MutHTP: Prediction of disease‐causing and neutral mutations in human transmembrane proteins

Human mutation, 2020-03, Vol.41 (3), p.581-590

2020

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Why are ACE2 binding coronavirus strains SARS‐CoV/SARS‐CoV‐2 wild and NL63 mild?

Proteins, structure, function, and bioinformatics, 2021-04, Vol.89 (4), p.389-398

2021

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A novel hybrid SEIQR model incorporating the effect of quarantine and lockdown regulations for COVID-19

Scientific reports, 2021-12, Vol.11 (1), p.24073-24073, Article 24073

2021

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Reliable method for predicting the binding affinity of RNA-small molecule interactions using machine learning

Briefings in bioinformatics, 2024-01, Vol.25 (2)

2024

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HuVarBase: A human variant database with comprehensive information at gene and protein levels

PloS one, 2019-01, Vol.14 (1), p.e0210475-e0210475

2019

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CPAD, Curated Protein Aggregation Database: A Repository of Manually Curated Experimental Data on Protein and Peptide Aggregation

PloS one, 2016-04, Vol.11 (4), p.e0152949-e0152949

2016

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Exploring antibody repurposing for COVID-19: beyond presumed roles of therapeutic antibodies

Scientific reports, 2021-05, Vol.11 (1), p.10220-10220, Article 10220

2021

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PCA-MutPred: Prediction of Binding Free Energy Change Upon Missense Mutation in Protein-carbohydrate Complexes

Journal of molecular biology, 2022-06, Vol.434 (11), p.167526-167526, Article 167526

2022

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An in-silico method for identifying aggregation rate enhancer and mitigator mutations in proteins

International journal of biological macromolecules, 2018-10, Vol.118 (Pt A), p.1157-1167

2018

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Structure based Drug Designing Approaches in SARS-CoV-2 Spike Inhibitor Design

Current topics in medicinal chemistry, 2022-01, Vol.22 (29), p.2396-2409

2022

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Exploring the selective vulnerability in Alzheimer disease using tissue specific variant analysis

Genomics (San Diego, Calif.), 2019-07, Vol.111 (4), p.936-949

2019

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Ab-CoV: a curated database for binding affinity and neutralization profiles of coronavirus-related antibodies

Bioinformatics, 2022-08, Vol.38 (16), p.4051-4052

2022

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In silico evaluation of the impact of Omicron variant of concern sublineage BA.4 and BA.5 on the sensitivity of RT‐qPCR assays for SARS‐CoV‐2 detection using whole genome sequencing

Journal of medical virology, 2023-01, Vol.95 (1), p.e28241-n/a

2023

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COVID-19 outbreak: history, mechanism, transmission, structural studies and therapeutics

Intelligent Computing Methodologies: 14th International Conference, ICIC 2018, Wuhan, China, August 15-18, 2018, Proceedings, Part III

ProThermDB: thermodynamic database for proteins and mutants revisited after 15 years

Intelligent Computing Methodologies: 13th International Conference, ICIC 2017, Liverpool, UK, August 7-10, 2017, Proceedings, Part III

Protein–protein interactions: scoring schemes and binding affinity

Protein-protein binding affinity prediction from amino acid sequence

PROXiMATE: a database of mutant protein-protein complex thermodynamics and kinetics

PDA-Pred: Predicting the binding affinity of protein-DNA complexes using machine learning techniques and structural features

ANuPP: A Versatile Tool to Predict Aggregation Nucleating Regions in Peptides and Proteins

Neurodegenerative Diseases - Is Metabolic Deficiency the Root Cause?

R-SIM: A Database of Binding Affinities for RNA-small Molecule Interactions

Multi-omics-based identification of SARS-CoV-2 infection biology and candidate drugs against COVID-19

Pred‐MutHTP: Prediction of disease‐causing and neutral mutations in human transmembrane proteins

Why are ACE2 binding coronavirus strains SARS‐CoV/SARS‐CoV‐2 wild and NL63 mild?

A novel hybrid SEIQR model incorporating the effect of quarantine and lockdown regulations for COVID-19

Reliable method for predicting the binding affinity of RNA-small molecule interactions using machine learning

HuVarBase: A human variant database with comprehensive information at gene and protein levels

CPAD, Curated Protein Aggregation Database: A Repository of Manually Curated Experimental Data on Protein and Peptide Aggregation

Exploring antibody repurposing for COVID-19: beyond presumed roles of therapeutic antibodies

PCA-MutPred: Prediction of Binding Free Energy Change Upon Missense Mutation in Protein-carbohydrate Complexes

An in-silico method for identifying aggregation rate enhancer and mitigator mutations in proteins

Structure based Drug Designing Approaches in SARS-CoV-2 Spike Inhibitor Design

Exploring the selective vulnerability in Alzheimer disease using tissue specific variant analysis

Ab-CoV: a curated database for binding affinity and neutralization profiles of coronavirus-related antibodies

In silico evaluation of the impact of Omicron variant of concern sublineage BA.4 and BA.5 on the sensitivity of RT‐qPCR assays for SARS‐CoV‐2 detection using whole genome sequencing

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