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Hidden diversity of soil giant viruses

Nature communications, 2018-11, Vol.9 (1), p.4881-9, Article 4881

2018

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Probing the active fraction of soil microbiomes using BONCAT-FACS

Nature communications, 2019-06, Vol.10 (1), p.2770-10, Article 2770

2019

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Visualizing in situ translational activity for identifying and sorting slow-growing archaeal–bacterial consortia

Proceedings of the National Academy of Sciences - PNAS, 2016-07, Vol.113 (28), p.E4069-E4078

2016

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The Salmonella Transcriptome in Lettuce and Cilantro Soft Rot Reveals a Niche Overlap with the Animal Host Intestine

Applied and Environmental Microbiology, 2013-01, Vol.79 (1), p.250-262

2013

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Activity-based, genome-resolved metagenomics uncovers key populations and pathways involved in subsurface conversions of coal to methane

The ISME Journal, 2022-04, Vol.16 (4), p.915-926

2022

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Multicellular magnetotactic bacteria are genetically heterogeneous consortia with metabolically differentiated cells

PLoS biology, 2024-07, Vol.22 (7), p.e3002638

2024

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Global metagenomic survey reveals a new bacterial candidate phylum in geothermal springs

Nature communications, 2016-01, Vol.7 (1), p.10476-10476, Article 10476

2016

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Physiological potential and evolutionary trajectories of syntrophic sulfate-reducing bacterial partners of anaerobic methanotrophic archaea

PLoS biology, 2023-09, Vol.21 (9), p.e3002292-e3002292

2023

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Host population diversity as a driver of viral infection cycle in wild populations of green sulfur bacteria with long standing virus-host interactions

The ISME Journal, 2021-06, Vol.15 (6), p.1569-1584

2021

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Subsurface hydrocarbon degradation strategies in low- and high-sulfate coal seam communities identified with activity-based metagenomics

NPJ biofilms and microbiomes, 2022-02, Vol.8 (1), p.7-7, Article 7

2022

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Transcriptome Analysis of Escherichia coli O157:H7 Exposed to Lysates of Lettuce Leaves

Applied and Environmental Microbiology, 2010-03, Vol.76 (5), p.1375-1387

2010

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BONCAT-FACS-Seq reveals the active fraction of a biocrust community undergoing a wet-up event

Frontiers in microbiology, 2023-06, Vol.14, p.1176751-1176751

2023

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A pipeline for targeted metagenomics of environmental bacteria

Microbiome, 2020-02, Vol.8 (1), p.21-21, Article 21

2020

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Anti-signal recognition particle autoantibody ELISA validation and clinical associations

Rheumatology (Oxford, England), 2015-07, Vol.54 (7), p.1194-1199

2015

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Optimizing de novo genome assembly from PCR-amplified metagenomes

PeerJ (San Francisco, CA), 2019-05, Vol.7, p.e6902-e6902, Article e6902

2019

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Obtaining genomes from uncultivated environmental microorganisms using FACS-based single-cell genomics

Nature protocols, 2014-05, Vol.9 (5), p.1038-1048

2014

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Comparative genomics reveals electron transfer and syntrophic mechanisms differentiating methanotrophic and methanogenic archaea

PLoS biology, 2022-01, Vol.20 (1), p.e3001508-e3001508

2022

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A centimeter-long bacterium with DNA contained in metabolically active, membrane-bound organelles

Science (American Association for the Advancement of Science), 2022-06, Vol.376 (6600), p.1453-1458

2022

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Autoantibody levels in myositis patients correlate with clinical response during B cell depletion with rituximab

Rheumatology (Oxford, England), 2016-06, Vol.55 (6), p.991-999

2016

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Community Structure and Microbial Associations in Sediment-Free Methanotrophic Enrichment Cultures from a Marine Methane Seep

Applied and environmental microbiology, 2022-06, Vol.88 (11), p.e0210921-e0210921

2022

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Physiological potential and evolutionary trajectories of syntrophic sulfate-reducing bacterial partners of anaerobic methanotrophic archaea

PLoS biology, 2023-09, Vol.21 (9)

2023

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Spatial co-transcriptomics reveals discrete stages of the arbuscular mycorrhizal symbiosis

Nature plants, 2024-04, Vol.10 (4), p.673-688

2024

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Comparative genomics reveals electron transfer and syntrophic mechanisms differentiating methanotrophic and methanogenic archaea

PLoS biology, 2022-01, Vol.20 (1)

2022

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Autoantibody levels in myositis patients correlate with clinical response during B cell depletion with rituximab

Rheumatology (Oxford, England), 2016-09, Vol.55 (9), p.1710-1710

2016

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Anti-transcription intermediary factor 1-gamma autoantibody ELISA development and validation

Rheumatology (Oxford, England), 2014-03, Vol.53 (3), p.433-437

2014

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Hidden diversity of soil giant viruses

Probing the active fraction of soil microbiomes using BONCAT-FACS

Visualizing in situ translational activity for identifying and sorting slow-growing archaeal–bacterial consortia

The Salmonella Transcriptome in Lettuce and Cilantro Soft Rot Reveals a Niche Overlap with the Animal Host Intestine

Activity-based, genome-resolved metagenomics uncovers key populations and pathways involved in subsurface conversions of coal to methane

Multicellular magnetotactic bacteria are genetically heterogeneous consortia with metabolically differentiated cells

Global metagenomic survey reveals a new bacterial candidate phylum in geothermal springs

Physiological potential and evolutionary trajectories of syntrophic sulfate-reducing bacterial partners of anaerobic methanotrophic archaea

Host population diversity as a driver of viral infection cycle in wild populations of green sulfur bacteria with long standing virus-host interactions

Subsurface hydrocarbon degradation strategies in low- and high-sulfate coal seam communities identified with activity-based metagenomics

Transcriptome Analysis of Escherichia coli O157:H7 Exposed to Lysates of Lettuce Leaves

BONCAT-FACS-Seq reveals the active fraction of a biocrust community undergoing a wet-up event

A pipeline for targeted metagenomics of environmental bacteria

Anti-signal recognition particle autoantibody ELISA validation and clinical associations

Optimizing de novo genome assembly from PCR-amplified metagenomes

Obtaining genomes from uncultivated environmental microorganisms using FACS-based single-cell genomics

Comparative genomics reveals electron transfer and syntrophic mechanisms differentiating methanotrophic and methanogenic archaea

A centimeter-long bacterium with DNA contained in metabolically active, membrane-bound organelles

Autoantibody levels in myositis patients correlate with clinical response during B cell depletion with rituximab

Community Structure and Microbial Associations in Sediment-Free Methanotrophic Enrichment Cultures from a Marine Methane Seep

Physiological potential and evolutionary trajectories of syntrophic sulfate-reducing bacterial partners of anaerobic methanotrophic archaea

Spatial co-transcriptomics reveals discrete stages of the arbuscular mycorrhizal symbiosis

Comparative genomics reveals electron transfer and syntrophic mechanisms differentiating methanotrophic and methanogenic archaea

Autoantibody levels in myositis patients correlate with clinical response during B cell depletion with rituximab

Anti-transcription intermediary factor 1-gamma autoantibody ELISA development and validation

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