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Hypermutation in human cancer genomes: footprints and mechanisms

Nature reviews. Cancer, 2014-12, Vol.14 (12), p.786-800

2014

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Clustered Mutations in Yeast and in Human Cancers Can Arise from Damaged Long Single-Strand DNA Regions

Molecular cell, 2012-05, Vol.46 (4), p.424-435

2012

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Clusters of Multiple Mutations: Incidence and Molecular Mechanisms

Annual review of genetics, 2015-11, Vol.49 (1), p.243-267

2015

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Hypermutation in single-stranded DNA

DNA repair, 2020-07, Vol.91-92, p.102868-102868, Article 102868

2020

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Similarity between mutation spectra in hypermutated genomes of rubella virus and in SARS-CoV-2 genomes accumulated during the COVID-19 pandemic

PloS one, 2020-10, Vol.15 (10), p.e0237689

2020

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Infectious vaccine-derived rubella viruses emerge, persist, and evolve in cutaneous granulomas of children with primary immunodeficiencies

PLoS pathogens, 2019-10, Vol.15 (10), p.e1008080

2019

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An APOBEC3A hypermutation signature is distinguishable from the signature of background mutagenesis by APOBEC3B in human cancers

Nature genetics, 2015-09, Vol.47 (9), p.1067-1072

2015

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Mutational signatures of redox stress in yeast single-strand DNA and of aging in human mitochondrial DNA share a common feature

PLoS biology, 2019-05, Vol.17 (5), p.e3000263

2019

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APOBEC3-dependent kataegis and TREX1-driven chromothripsis during telomere crisis

Nature genetics, 2020-09, Vol.52 (9), p.884-890

2020

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Copy number signature analysis tool and its application in prostate cancer reveals distinct mutational processes and clinical outcomes

PLoS genetics, 2021-05, Vol.17 (5), p.e1009557

2021

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Repair of multiple simultaneous double-strand breaks causes bursts of genome-wide clustered hypermutation

PLoS biology, 2019-09, Vol.17 (9), p.e3000464

2019

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Break-Induced Replication Is a Source of Mutation Clusters Underlying Kataegis

Cell reports (Cambridge), 2014-06, Vol.7 (5), p.1640-1648

2014

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An APOBEC cytidine deaminase mutagenesis pattern is widespread in human cancers

Nature genetics, 2013-09, Vol.45 (9), p.970-976

2013

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The Impact of Environmental and Endogenous Damage on Somatic Mutation Load in Human Skin Fibroblasts

PLoS genetics, 2016-10, Vol.12 (10), p.e1006385

2016

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TDP-43 mutations link Amyotrophic Lateral Sclerosis with R-loop homeostasis and R loop-mediated DNA damage

PLoS genetics, 2020-12, Vol.16 (12), p.e1009260-e1009260

2020

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Somatic mutation load and spectra: A record of DNA damage and repair in healthy human cells

Environmental and molecular mutagenesis, 2018-10, Vol.59 (8), p.672-686

2018

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ARID1A regulates R-loop associated DNA replication stress

PLoS genetics, 2021-04, Vol.17 (4), p.e1009238-e1009238

2021

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Hypermutability of damaged single-strand DNA formed at double-strand breaks and uncapped telomeres in yeast Saccharomyces cerevisiae

PLoS genetics, 2008-11, Vol.4 (11), p.e1000264-e1000264

2008

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Genomic Subtypes of Non-invasive Bladder Cancer with Distinct Metabolic Profile and Female Gender Bias in KDM6A Mutation Frequency

Cancer cell, 2017-11, Vol.32 (5), p.701-715.e7

2017

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Acetylation Reader Proteins: Linking Acetylation Signaling to Genome Maintenance and Cancer

PLoS Genetics, 2016-09, Vol.12 (9), p.e1006272-e1006272

2016

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Base damage within single-strand DNA underlies in vivo hypermutability induced by a ubiquitous environmental agent

PLoS genetics, 2012-12, Vol.8 (12), p.e1003149

2012

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Division of Labor at the Eukaryotic Replication Fork

Molecular cell, 2008-04, Vol.30 (2), p.137-144

2008

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Elevated pyrimidine dimer formation at distinct genomic bases underlies promoter mutation hotspots in UV-exposed cancers

PLoS genetics, 2018-12, Vol.14 (12), p.e1007849-e1007849

2018

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Heterogeneous polymerase fidelity and mismatch repair bias genome variation and composition

Genome research, 2014-11, Vol.24 (11), p.1751-1764

2014

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Cohesin Is limiting for the suppression of DNA damage-induced recombination between homologous chromosomes

PLoS genetics, 2010-07, Vol.6 (7), p.e1001006

2010

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Hypermutation in human cancer genomes: footprints and mechanisms

Clustered Mutations in Yeast and in Human Cancers Can Arise from Damaged Long Single-Strand DNA Regions

Clusters of Multiple Mutations: Incidence and Molecular Mechanisms

Hypermutation in single-stranded DNA

Similarity between mutation spectra in hypermutated genomes of rubella virus and in SARS-CoV-2 genomes accumulated during the COVID-19 pandemic

Infectious vaccine-derived rubella viruses emerge, persist, and evolve in cutaneous granulomas of children with primary immunodeficiencies

An APOBEC3A hypermutation signature is distinguishable from the signature of background mutagenesis by APOBEC3B in human cancers

Mutational signatures of redox stress in yeast single-strand DNA and of aging in human mitochondrial DNA share a common feature

APOBEC3-dependent kataegis and TREX1-driven chromothripsis during telomere crisis

Copy number signature analysis tool and its application in prostate cancer reveals distinct mutational processes and clinical outcomes

Repair of multiple simultaneous double-strand breaks causes bursts of genome-wide clustered hypermutation

Break-Induced Replication Is a Source of Mutation Clusters Underlying Kataegis

An APOBEC cytidine deaminase mutagenesis pattern is widespread in human cancers

The Impact of Environmental and Endogenous Damage on Somatic Mutation Load in Human Skin Fibroblasts

TDP-43 mutations link Amyotrophic Lateral Sclerosis with R-loop homeostasis and R loop-mediated DNA damage

Somatic mutation load and spectra: A record of DNA damage and repair in healthy human cells

ARID1A regulates R-loop associated DNA replication stress

Hypermutability of damaged single-strand DNA formed at double-strand breaks and uncapped telomeres in yeast Saccharomyces cerevisiae

Genomic Subtypes of Non-invasive Bladder Cancer with Distinct Metabolic Profile and Female Gender Bias in KDM6A Mutation Frequency

Acetylation Reader Proteins: Linking Acetylation Signaling to Genome Maintenance and Cancer

Base damage within single-strand DNA underlies in vivo hypermutability induced by a ubiquitous environmental agent

Division of Labor at the Eukaryotic Replication Fork

Elevated pyrimidine dimer formation at distinct genomic bases underlies promoter mutation hotspots in UV-exposed cancers

Heterogeneous polymerase fidelity and mismatch repair bias genome variation and composition

Cohesin Is limiting for the suppression of DNA damage-induced recombination between homologous chromosomes

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