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Molecular phylogenomic study and the role of exogenous spermidine in the metabolic adjustment of endogenous polyamine in two rice cultivars under salt stress

Gene, 2017-04, Vol.609, p.88-103

2017

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In Silico Study of Mutational Stability of SARS-CoV-2 Proteins

The Protein Journal, 2021-06, Vol.40 (3), p.328-340

2021

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In Silico Designing of Antimicrobial Peptide Cocktail Drug Against SARS-CoV-1 and SARS-CoV-2 Replisome Complex

National Academy of Sciences, India. Proceedings. Section B. Biological Sciences, 2024-02, Vol.94 (1), p.145-159

2024

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An insight into the binding mechanism of Viprinin and its morpholine and piperidine derivatives with HIV-1 Vpr: molecular dynamics simulation, principal component analysis and binding free energy calculation study

Journal of biomolecular structure & dynamics, 2022-01, Vol.40 (21), p.10918-10930

2022

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Repurposing of drugs targeting heparan sulphate binding site of dengue virus envelope protein: an in silico competitive binding study

Molecular diversity, 2024-04

2024

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Identification and characterization of differentially expressed genes in the rice root following exogenous application of spermidine during salt stress

Genomics (San Diego, Calif.), 2020-11, Vol.112 (6), p.4125-4136

2020

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Repurposing of drug molecules from FDA database against Hepatitis C virus E2 protein using ensemble docking approach

Molecular diversity, 2024-06, Vol.28 (3), p.1175-1188

2024

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Repurposing of therapeutic antibodies against dengue virus envelope protein receptor binding domain

Archives of microbiology, 2024-07, Vol.206 (7), p.312, Article 312

2024

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Peptide based vaccine designing against endemic causing mammarenavirus using reverse vaccinology approach

Archives of microbiology, 2024-05, Vol.206 (5), p.217-217, Article 217

2024

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In silico designing of an epitope-based peptide vaccine cocktail against Nipah virus: an Indian population-based epidemiological study

Archives of microbiology, 2023-11, Vol.205 (12), p.380-380, Article 380

2023

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In silico characterization, molecular docking, and dynamic simulation of a novel fungal cell-death suppressing effector, MoRlpA as potential cathepsin B-like cysteine protease inhibitor during rice blast infection

Journal of biomolecular structure & dynamics, 2023-12, Vol.41 (18), p.9039-9056

2023

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Repurposing of FDA-approved drugs against oligomerization domain of dengue virus NS1 protein: a computational approach

Molecular diversity, 2024-07

2024

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Designing of nanobodies against Dengue virus Capsid: a computational affinity maturation approach

Journal of biomolecular structure & dynamics, 2023-04, Vol.41 (6), p.2289-2299

2023

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In silico investigation of binding propensity of hematoxylin derivative and damnacanthal for their potential inhibitory effect on HIV-1 Vpr from different subtypes

Journal of biomolecular structure & dynamics, 2023-12, Vol.41 (24), p.14977-14988

2023

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Computational Insights into the Conformational Dynamics of HIV‑1 Vpr in a Lipid Bilayer for Ion Channel Modeling

Journal of chemical information and modeling, 2024-04, Vol.64 (8), p.3360-3374

2024

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Exploring the chemical space for potential inhibitors against cell surface binding protein of Mpox virus using molecular fingerprint based screening approach

Journal of biomolecular structure & dynamics, 2023-07, Vol.ahead-of-print (ahead-of-print), p.1-14

2023

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In silico study on miRNA regulation and NSs protein interactome characterization of the SFTS virus

Journal of molecular graphics & modelling, 2022-12, Vol.117, p.108291-108291, Article 108291

2022

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Exploring the intrinsic dynamics of SARS-CoV-2, SARS-CoV and MERS-CoV spike glycoprotein through normal mode analysis using anisotropic network model

Journal of molecular graphics & modelling, 2021-01, Vol.102, p.107778-107778, Article 107778

2021

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In silico designing of peptide based vaccine for Hepatitis viruses using reverse vaccinology approach

Infection, genetics and evolution, 2020-10, Vol.84, p.104388-104388, Article 104388

2020

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Phylogenetic, structural, functional characterisation and effect of exogenous spermidine on rice ( Oryza sativa ) HAK transporters under salt stress

Functional plant biology : FPB, 2023-02, Vol.50 (2), p.160

2023

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Computer-aided de novo design and optimization of novel potential inhibitors of HIV-1 Nef protein

Computational biology and chemistry, 2023-06, Vol.104, p.107871-107871, Article 107871

2023

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A mechanistic study on the tolerance of PAM distal end mismatch by SpCas9

The Journal of biological chemistry, 2024-07, Vol.300 (7), p.107439, Article 107439

2024

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Prediction of infectivity of SARS-CoV-2 virus based on Spike-hACE-2 interaction

Virusdisease, 2022-09, Vol.33 (3), p.244-250

2022

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pH-Dependent Self-Assembly of Polyalanine Peptides

Biophysical journal, 2007-01, Vol.92 (1), p.293-302

2007

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Biochemical and Biophysical Investigation of the Molecular Determinants of HIV-1 Vif Packaging

Biophysical journal, 2011-02, Vol.100 (3), p.232a-232a

2011

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Molecular phylogenomic study and the role of exogenous spermidine in the metabolic adjustment of endogenous polyamine in two rice cultivars under salt stress

In Silico Study of Mutational Stability of SARS-CoV-2 Proteins

In Silico Designing of Antimicrobial Peptide Cocktail Drug Against SARS-CoV-1 and SARS-CoV-2 Replisome Complex

An insight into the binding mechanism of Viprinin and its morpholine and piperidine derivatives with HIV-1 Vpr: molecular dynamics simulation, principal component analysis and binding free energy calculation study

Repurposing of drugs targeting heparan sulphate binding site of dengue virus envelope protein: an in silico competitive binding study

Identification and characterization of differentially expressed genes in the rice root following exogenous application of spermidine during salt stress

Repurposing of drug molecules from FDA database against Hepatitis C virus E2 protein using ensemble docking approach

Repurposing of therapeutic antibodies against dengue virus envelope protein receptor binding domain

Peptide based vaccine designing against endemic causing mammarenavirus using reverse vaccinology approach

In silico designing of an epitope-based peptide vaccine cocktail against Nipah virus: an Indian population-based epidemiological study

In silico characterization, molecular docking, and dynamic simulation of a novel fungal cell-death suppressing effector, MoRlpA as potential cathepsin B-like cysteine protease inhibitor during rice blast infection

Repurposing of FDA-approved drugs against oligomerization domain of dengue virus NS1 protein: a computational approach

Designing of nanobodies against Dengue virus Capsid: a computational affinity maturation approach

In silico investigation of binding propensity of hematoxylin derivative and damnacanthal for their potential inhibitory effect on HIV-1 Vpr from different subtypes

Computational Insights into the Conformational Dynamics of HIV‑1 Vpr in a Lipid Bilayer for Ion Channel Modeling

Exploring the chemical space for potential inhibitors against cell surface binding protein of Mpox virus using molecular fingerprint based screening approach

In silico study on miRNA regulation and NSs protein interactome characterization of the SFTS virus

Exploring the intrinsic dynamics of SARS-CoV-2, SARS-CoV and MERS-CoV spike glycoprotein through normal mode analysis using anisotropic network model

In silico designing of peptide based vaccine for Hepatitis viruses using reverse vaccinology approach

Phylogenetic, structural, functional characterisation and effect of exogenous spermidine on rice ( Oryza sativa ) HAK transporters under salt stress

Computer-aided de novo design and optimization of novel potential inhibitors of HIV-1 Nef protein

A mechanistic study on the tolerance of PAM distal end mismatch by SpCas9

Prediction of infectivity of SARS-CoV-2 virus based on Spike-hACE-2 interaction

pH-Dependent Self-Assembly of Polyalanine Peptides

Biochemical and Biophysical Investigation of the Molecular Determinants of HIV-1 Vif Packaging

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