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NuSeT: A deep learning tool for reliably separating and analyzing crowded cells

PLoS computational biology, 2020-09, Vol.16 (9), p.e1008193-e1008193

2020

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Editorial: Highly resolved spatio-temporal dynamics of genome organization and its link with transcriptional dynamics editorial

Frontiers in molecular biosciences, 2023-06, Vol.10, p.1213345-1213345

Ghosh, Rajarshi P

2023

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Concerted localization-resets precede YAP-dependent transcription

Nature communications, 2020-09, Vol.11 (1), p.4581-4581, Article 4581

2020

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Rapid disorganization of mechanically interacting systems of mammary acini

Proceedings of the National Academy of Sciences - PNAS, 2014-01, Vol.111 (2), p.658-663

2014

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A fluorogenic array for temporally unlimited single-molecule tracking

Nature chemical biology, 2019-04, Vol.15 (4), p.401

2019

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Satb1 integrates DNA binding site geometry and torsional stress to differentially target nucleosome-dense regions

Nature communications, 2019-07, Vol.10 (1), p.3221-16, Article 3221

2019

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A Mutation in Histone H2B Represents a New Class of Oncogenic Driver

Cancer discovery, 2019-10, Vol.9 (10), p.1438-1451

2019

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Optical control of fast and processive engineered myosins in vitro and in living cells

Nature chemical biology, 2021-05, Vol.17 (5), p.540

2021

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MeCP2 Binds Cooperatively to Its Substrate and Competes with Histone H1 for Chromatin Binding Sites

Molecular and Cellular Biology, 2010-10, Vol.30 (19), p.4656-4670

2010

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Multiple Modes of Interaction between the Methylated DNA Binding Protein MeCP2 and Chromatin

Molecular and Cellular Biology, 2007-02, Vol.27 (3), p.864-877

2007

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MeCP2-Chromatin Interactions Include the Formation of Chromatosome-like Structures and Are Altered in Mutations Causing Rett Syndrome

The Journal of biological chemistry, 2007-09, Vol.282 (38), p.28237-28245

2007

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Chromatin higher-order structure and dynamics

Cold Spring Harbor perspectives in biology, 2010-05, Vol.2 (5), p.a000596-a000596

2010

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ATAC-see reveals the accessible genome by transposase-mediated imaging and sequencing

Nature methods, 2016-12, Vol.13 (12), p.1013

2016

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Rett Syndrome-causing Mutations in Human MeCP2 Result in Diverse Structural Changes That Impact Folding and DNA Interactions

The Journal of biological chemistry, 2008-07, Vol.283 (29), p.20523-20534

2008

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Fast and parallel nanoscale three-dimensional tracking of heterogeneous mammalian chromatin dynamics

Molecular biology of the cell, 2022-05, Vol.33 (6), p.ar47-ar47

2022

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Binding of the Rett syndrome protein, MeCP2, to methylated and unmethylated DNA and chromatin

IUBMB life, 2010-10, Vol.62 (10), p.732-738

2010

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Unique Physical Properties and Interactions of the Domains of Methylated DNA Binding Protein 2

Biochemistry (Easton), 2010-05, Vol.49 (20), p.4395-4410

2010

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Efficient fluorescent labeling of non-repetitive genomic loci enables high-precision three-dimensional tracking of endogenous regulatory elements in live cells

Biophysical journal, 2024-02, Vol.123 (3), p.367a-367a

2024

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Optical Control of Fast and Processive Engineered Myosins: Optimization and Characterization in Vitro and in Living Cells

Biophysical journal, 2018-02, Vol.114 (3), p.318a-318a

2018

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Optical Control of Fast and Processive Engineered Myosins In Vitro and in Living Cells

Biophysical journal, 2019-02, Vol.116 (3), p.259a-259a

2019

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An integrative approach towards understanding the structure-function relationship of the epigenetic regulator methyl CpG binding protein 2

Ghosh, Rajarshi P

2010

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Clinical Validity of Genes for Heritable Thoracic Aortic Aneurysm and Dissection

Journal of the American College of Cardiology, 2018-08, Vol.72 (6), p.605-615

2018

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Ecosystem and Species Habitat Modeling for Conservation and Restoration

1, 2023

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Evaluating the Clinical Validity of Gene-Disease Associations: An Evidence-Based Framework Developed by the Clinical Genome Resource

American journal of human genetics, 2017-06, Vol.100 (6), p.895-906

2017

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Natural Variation in a Chloride Channel Subunit Confers Avermectin Resistance in C. elegans

Science (American Association for the Advancement of Science), 2012-02, Vol.335 (6068), p.574-578

2012

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NuSeT: A deep learning tool for reliably separating and analyzing crowded cells

Editorial: Highly resolved spatio-temporal dynamics of genome organization and its link with transcriptional dynamics editorial

Concerted localization-resets precede YAP-dependent transcription

Rapid disorganization of mechanically interacting systems of mammary acini

A fluorogenic array for temporally unlimited single-molecule tracking

Satb1 integrates DNA binding site geometry and torsional stress to differentially target nucleosome-dense regions

A Mutation in Histone H2B Represents a New Class of Oncogenic Driver

Optical control of fast and processive engineered myosins in vitro and in living cells

MeCP2 Binds Cooperatively to Its Substrate and Competes with Histone H1 for Chromatin Binding Sites

Multiple Modes of Interaction between the Methylated DNA Binding Protein MeCP2 and Chromatin

MeCP2-Chromatin Interactions Include the Formation of Chromatosome-like Structures and Are Altered in Mutations Causing Rett Syndrome

Chromatin higher-order structure and dynamics

ATAC-see reveals the accessible genome by transposase-mediated imaging and sequencing

Rett Syndrome-causing Mutations in Human MeCP2 Result in Diverse Structural Changes That Impact Folding and DNA Interactions

Fast and parallel nanoscale three-dimensional tracking of heterogeneous mammalian chromatin dynamics

Binding of the Rett syndrome protein, MeCP2, to methylated and unmethylated DNA and chromatin

Unique Physical Properties and Interactions of the Domains of Methylated DNA Binding Protein 2

Efficient fluorescent labeling of non-repetitive genomic loci enables high-precision three-dimensional tracking of endogenous regulatory elements in live cells

Optical Control of Fast and Processive Engineered Myosins: Optimization and Characterization in Vitro and in Living Cells

Optical Control of Fast and Processive Engineered Myosins In Vitro and in Living Cells

An integrative approach towards understanding the structure-function relationship of the epigenetic regulator methyl CpG binding protein 2

Clinical Validity of Genes for Heritable Thoracic Aortic Aneurysm and Dissection

Ecosystem and Species Habitat Modeling for Conservation and Restoration

Evaluating the Clinical Validity of Gene-Disease Associations: An Evidence-Based Framework Developed by the Clinical Genome Resource

Natural Variation in a Chloride Channel Subunit Confers Avermectin Resistance in C. elegans

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