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Chaste: an open source C++ library for computational physiology and biology

PLoS computational biology, 2013-03, Vol.9 (3), p.e1002970-e1002970

2013

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Comparing individual-based approaches to modelling the self-organization of multicellular tissues

PLoS computational biology, 2017-02, Vol.13 (2), p.e1005387-e1005387

2017

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The role of the Hes1 crosstalk hub in Notch-Wnt interactions of the intestinal crypt

PLoS computational biology, 2017-02, Vol.13 (2), p.e1005400-e1005400

2017

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Retuning the Catalytic Bias and Overpotential of a [NiFe]-Hydrogenase via a Single Amino Acid Exchange at the Electron Entry/Exit Site

Journal of the American Chemical Society, 2017-08, Vol.139 (31), p.10677-10686

2017

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Simulation of multiple ion channel block provides improved early prediction of compounds' clinical torsadogenic risk

Cardiovascular research, 2011-07, Vol.91 (1), p.53-61

2011

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Implementing vertex dynamics models of cell populations in biology within a consistent computational framework

Progress in biophysics and molecular biology, 2013-11, Vol.113 (2), p.299-326

2013

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Importance of modelling hERG binding in predicting drug-induced action potential prolongations for drug safety assessment

Frontiers in pharmacology, 2023-03, Vol.14, p.1110555-1110555

2023

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Review of automatic pulmonary lobe segmentation methods from CT

Computerized medical imaging and graphics, 2015-03, Vol.40, p.13-29

2015

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Cardiac tissue slices: preparation, handling, and successful optical mapping

American journal of physiology. Heart and circulatory physiology, 2015-05, Vol.308 (9), p.H1112-H1125

2015

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Prediction of Thorough QT study results using action potential simulations based on ion channel screens

Journal of pharmacological and toxicological methods, 2014-11, Vol.70 (3), p.246-254

2014

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Tailoring Mathematical Models to Stem-Cell Derived Cardiomyocyte Lines Can Improve Predictions of Drug-Induced Changes to Their Electrophysiology

Frontiers in physiology, 2017-12, Vol.8, p.986-986

2017

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A Parameter Representing Missing Charge Should Be Considered when Calibrating Action Potential Models

Frontiers in physiology, 2022-04, Vol.13, p.879035

2022

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Metabolic changes during carcinogenesis: Potential impact on invasiveness

Journal of theoretical biology, 2007-02, Vol.244 (4), p.703-713

2007

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A two-dimensional model of the colonic crypt accounting for the role of the basement membrane and pericryptal fibroblast sheath

PLoS computational biology, 2012-05, Vol.8 (5), p.e1002515-e1002515

2012

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Evaluation of an in silico cardiac safety assay: Using ion channel screening data to predict QT interval changes in the rabbit ventricular wedge

Journal of pharmacological and toxicological methods, 2013-07, Vol.68 (1), p.88-96

2013

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Ten simple rules for surviving an interdisciplinary PhD

PLoS computational biology, 2017-05, Vol.13 (5), p.e1005512-e1005512

2017

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Four Ways to Fit an Ion Channel Model

Biophysical journal, 2019-12, Vol.117 (12), p.2420-2437

2019

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The free energy landscape of dimerization of a membrane protein, NanC

PLoS computational biology, 2014-01, Vol.10 (1), p.e1003417-e1003417

2014

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Ten simple rules for effective computational research

PLoS computational biology, 2014-03, Vol.10 (3), p.e1003506-e1003506

2014

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Predicting Tumor Location by Modeling the Deformation of the Breast

IEEE transactions on biomedical engineering, 2008-10, Vol.55 (10), p.2471-2480

2008

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Rapid Characterization of hERG Channel Kinetics I: Using an Automated High-Throughput System

Biophysical journal, 2019-12, Vol.117 (12), p.2438-2454

2019

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Hodgkin–Huxley revisited: reparametrization and identifiability analysis of the classic action potential model with approximate Bayesian methods

Royal Society open science, 2015-12, Vol.2 (12), p.150499-150499

2015

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A Voltammetric Perspective of Multi-Electron and Proton Transfer in Protein Redox Chemistry: Insights From Computational Analysis of Escherichia coli HypD Fourier Transformed Alternating Current Voltammetry

Frontiers in chemistry, 2021-06, Vol.9, p.672831-672831

2021

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A Monte Carlo method to estimate cell population heterogeneity from cell snapshot data

Journal of theoretical biology, 2021-02, Vol.511, p.110541-110541, Article 110541

2021

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Model-driven optimal experimental design for calibrating cardiac electrophysiology models

Computer methods and programs in biomedicine, 2023-10, Vol.240, p.107690-107690, Article 107690

2023

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Chaste: an open source C++ library for computational physiology and biology

Comparing individual-based approaches to modelling the self-organization of multicellular tissues

The role of the Hes1 crosstalk hub in Notch-Wnt interactions of the intestinal crypt

Retuning the Catalytic Bias and Overpotential of a [NiFe]-Hydrogenase via a Single Amino Acid Exchange at the Electron Entry/Exit Site

Simulation of multiple ion channel block provides improved early prediction of compounds' clinical torsadogenic risk

Implementing vertex dynamics models of cell populations in biology within a consistent computational framework

Importance of modelling hERG binding in predicting drug-induced action potential prolongations for drug safety assessment

Review of automatic pulmonary lobe segmentation methods from CT

Cardiac tissue slices: preparation, handling, and successful optical mapping

Prediction of Thorough QT study results using action potential simulations based on ion channel screens

Tailoring Mathematical Models to Stem-Cell Derived Cardiomyocyte Lines Can Improve Predictions of Drug-Induced Changes to Their Electrophysiology

A Parameter Representing Missing Charge Should Be Considered when Calibrating Action Potential Models

Metabolic changes during carcinogenesis: Potential impact on invasiveness

A two-dimensional model of the colonic crypt accounting for the role of the basement membrane and pericryptal fibroblast sheath

Evaluation of an in silico cardiac safety assay: Using ion channel screening data to predict QT interval changes in the rabbit ventricular wedge

Ten simple rules for surviving an interdisciplinary PhD

Four Ways to Fit an Ion Channel Model

The free energy landscape of dimerization of a membrane protein, NanC

Ten simple rules for effective computational research

Predicting Tumor Location by Modeling the Deformation of the Breast

Rapid Characterization of hERG Channel Kinetics I: Using an Automated High-Throughput System

Hodgkin–Huxley revisited: reparametrization and identifiability analysis of the classic action potential model with approximate Bayesian methods

A Voltammetric Perspective of Multi-Electron and Proton Transfer in Protein Redox Chemistry: Insights From Computational Analysis of Escherichia coli HypD Fourier Transformed Alternating Current Voltammetry

A Monte Carlo method to estimate cell population heterogeneity from cell snapshot data

Model-driven optimal experimental design for calibrating cardiac electrophysiology models

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