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Single-cell RNA sequencing coupled to TCR profiling of large granular lymphocyte leukemia T cells

Nature communications, 2022-04, Vol.13 (1), p.1982-1982, Article 1982

2022

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Advanced Applications of RNA Sequencing and Challenges

Bioinformatics and Biology Insights, 2015-01, Vol.2015 (S1), p.29-46

2015

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CAISC: A software to integrate copy number variations and single nucleotide mutations for genetic heterogeneity profiling and subclone detection by single-cell RNA sequencing

BMC bioinformatics, 2022-03, Vol.23 (Suppl 3), p.98-98, Article 98

2022

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Long noncoding RNAs of single hematopoietic stem and progenitor cells in healthy and dysplastic human bone marrow

Haematologica (Roma), 2019-05, Vol.104 (5), p.894

2019

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Single-cell RNA-seq reveals a distinct transcriptome signature of aneuploid hematopoietic cells

Blood, 2017-12, Vol.130 (25), p.2762-2773

2017

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Efficacy of combined low-dose ruxolitinib and cyclosporine in murine immune bone marrow failure

Haematologica (Roma), 2024-05, Vol.109 (5), p.1603

2024

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Comprehensive network modeling from single cell RNA sequencing of human and mouse reveals well conserved transcription regulation of hematopoiesis

BMC genomics, 2020-12, Vol.21 (Suppl 11), p.849-849, Article 849

2020

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Quantitative utilization of prior biological knowledge in the Bayesian network modeling of gene expression data

BMC bioinformatics, 2011-08, Vol.12 (1), p.359-359, Article 359

2011

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CellCallEXT: Analysis of Ligand–Receptor and Transcription Factor Activities in Cell–Cell Communication of Tumor Immune Microenvironment

Cancers, 2022-10, Vol.14 (19), p.4957

2022

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TAPPA: topological analysis of pathway phenotype association

Bioinformatics, 2007-11, Vol.23 (22), p.3100-3102

2007

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Comprehensive analysis of single-cell RNA sequencing data from healthy human marrow hematopoietic cells

BMC research notes, 2020-11, Vol.13 (1), p.514-514, Article 514

2020

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Conventional Co-Housing Modulates Murine Gut Microbiota and Hematopoietic Gene Expression

International journal of molecular sciences, 2020-08, Vol.21 (17), p.6143

2020

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Time-Varying Gene Expression Network Analysis Reveals Conserved Transition States in Hematopoietic Differentiation between Human and Mouse

Genes, 2022-10, Vol.13 (10), p.1890

2022

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Comparative Transcriptomic Analysis of the Hematopoietic System between Human and Mouse by Single Cell RNA Sequencing

Cells (Basel, Switzerland), 2021-04, Vol.10 (5), p.973

2021

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Cross tissue trait-pathway network reveals the importance of oxidative stress and inflammation pathways in obesity-induced diabetes in mouse

PloS one, 2012-09, Vol.7 (9), p.e44544-e44544

2012

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A Systems Biology Approach to Investigating Sex Differences in Cardiac Hypertrophy

Journal of the American Heart Association, 2017-08, Vol.6 (8), p.n/a

2017

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Abnormal RNA splicing and genomic instability after induction of DNMT3A mutations by CRISPR/Cas9 gene editing

Blood cells, molecules, & diseases, 2018-03, Vol.69, p.10-22

2018

Volltextzugriff (PDF)

Identification of highly synchronized subnetworks from gene expression data

BMC bioinformatics, 2013-06, Vol.14 Suppl 9 (Suppl 9), p.S5-S5, Article S5

2013

Volltextzugriff (PDF)

F180. Temporal Dynamics of miRNAs in Human DLPFC and its Association With miRNA Dysregulation in Schizophrenia

Biological psychiatry (1969), 2019-05, Vol.85 (10), p.S283-S283

2019

Volltextzugriff (PDF)

Efficacy of JAK1/2 inhibition in murine immune bone marrow failure

Blood, 2023-01, Vol.141 (1), p.72-89

2023

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Granulocytic Myeloid-Derived Suppressor Cells in Murine Models of Immune-Mediated Bone Marrow Failure

Blood, 2021-11, Vol.138 (Supplement 1), p.2176-2176

2021

Volltextzugriff (PDF)

Analysis of deficiency of adenosine deaminase 2 pathogenesis based on single‐cell RNA sequencing of monocytes

Journal of leukocyte biology, 2021-09, Vol.110 (3), p.409-424

2021

Volltextzugriff (PDF)

JAK 1/2 Inhibition Preserves Hematopoietic Progenitor and Stem Cells, Prevents Aplasia, Inhibits Pro-Inflammatory Cytokines, and Prolongs Survival in Murine Immune Bone Marrow Failure

Blood, 2022-11, Vol.140 (Supplement 1), p.471-472

2022

Volltextzugriff (PDF)

Oligoclonal T-cell expansion in a patient with bone marrow failure after CD19 CAR-T therapy for Richter-transformed DLBCL

Blood, 2022-11, Vol.140 (20), p.2175-2179

2022

Volltextzugriff (PDF)

Analysis of Deficiency of Adenosine Deaminase 2 Pathogenesis Based on Single Cell RNA Sequencing of Monocytes

Blood, 2019-11, Vol.134 (Supplement_1), p.2317-2317

2019

Volltextzugriff (PDF)

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Single-cell RNA sequencing coupled to TCR profiling of large granular lymphocyte leukemia T cells

Advanced Applications of RNA Sequencing and Challenges

CAISC: A software to integrate copy number variations and single nucleotide mutations for genetic heterogeneity profiling and subclone detection by single-cell RNA sequencing

Long noncoding RNAs of single hematopoietic stem and progenitor cells in healthy and dysplastic human bone marrow

Single-cell RNA-seq reveals a distinct transcriptome signature of aneuploid hematopoietic cells

Efficacy of combined low-dose ruxolitinib and cyclosporine in murine immune bone marrow failure

Comprehensive network modeling from single cell RNA sequencing of human and mouse reveals well conserved transcription regulation of hematopoiesis

Quantitative utilization of prior biological knowledge in the Bayesian network modeling of gene expression data

CellCallEXT: Analysis of Ligand–Receptor and Transcription Factor Activities in Cell–Cell Communication of Tumor Immune Microenvironment

TAPPA: topological analysis of pathway phenotype association

Comprehensive analysis of single-cell RNA sequencing data from healthy human marrow hematopoietic cells

Conventional Co-Housing Modulates Murine Gut Microbiota and Hematopoietic Gene Expression

Time-Varying Gene Expression Network Analysis Reveals Conserved Transition States in Hematopoietic Differentiation between Human and Mouse

Comparative Transcriptomic Analysis of the Hematopoietic System between Human and Mouse by Single Cell RNA Sequencing

Cross tissue trait-pathway network reveals the importance of oxidative stress and inflammation pathways in obesity-induced diabetes in mouse

A Systems Biology Approach to Investigating Sex Differences in Cardiac Hypertrophy

Abnormal RNA splicing and genomic instability after induction of DNMT3A mutations by CRISPR/Cas9 gene editing

Identification of highly synchronized subnetworks from gene expression data

F180. Temporal Dynamics of miRNAs in Human DLPFC and its Association With miRNA Dysregulation in Schizophrenia

Efficacy of JAK1/2 inhibition in murine immune bone marrow failure

Granulocytic Myeloid-Derived Suppressor Cells in Murine Models of Immune-Mediated Bone Marrow Failure

Analysis of deficiency of adenosine deaminase 2 pathogenesis based on single‐cell RNA sequencing of monocytes

JAK 1/2 Inhibition Preserves Hematopoietic Progenitor and Stem Cells, Prevents Aplasia, Inhibits Pro-Inflammatory Cytokines, and Prolongs Survival in Murine Immune Bone Marrow Failure

Oligoclonal T-cell expansion in a patient with bone marrow failure after CD19 CAR-T therapy for Richter-transformed DLBCL

Analysis of Deficiency of Adenosine Deaminase 2 Pathogenesis Based on Single Cell RNA Sequencing of Monocytes

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