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Sequential actions of EOMES and T-BET promote stepwise maturation of natural killer cells

Nature communications, 2021-09, Vol.12 (1), p.5446-17, Article 5446

2021

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Highly rearranged chromosomes reveal uncoupling between genome topology and gene expression

Nature genetics, 2019-08, Vol.51 (8), p.1272-1282

2019

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Tissue-specific analysis of chromatin state identifies temporal signatures of enhancer activity during embryonic development

Nature genetics, 2012-02, Vol.44 (2), p.148-156

2012

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Dual functionality of cis -regulatory elements as developmental enhancers and Polycomb response elements

Genes & development, 2017-03, Vol.31 (6), p.590-602

2017

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FourCSeq: analysis of 4C sequencing data

Bioinformatics, 2015-10, Vol.31 (19), p.3085-3091

2015

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Chromosome topology guides the Drosophila Dosage Compensation Complex for target gene activation

EMBO reports, 2017-10, Vol.18 (10), p.1854-1868

2017

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Zeb1 represses TCR signaling, promotes the proliferation of T cell progenitors and is essential for NK1.1 + T cell development

Cellular & molecular immunology, 2021-09, Vol.18 (9), p.2140-2152

2021

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PHD and TFIIS-Like domains of the Bye1 transcription factor determine its multivalent genomic distribution

PloS one, 2014-07, Vol.9 (7), p.e102464-e102464

2014

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Mutations of RNA polymerase II activate key genes of the nucleoside triphosphate biosynthetic pathways

The EMBO journal, 2008-09, Vol.27 (18), p.2411-2421

2008

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Functional Consequences of Chromosomal Rearrangements on Gene Expression: Not So Deleterious After All?

Journal of molecular biology, 2020-02, Vol.432 (3), p.665-675

Ghavi-Helm, Yad

2020

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Multigenome analysis identifies a worldwide distributed epidemic Legionella pneumophila clone that emerged within a highly diverse species

Genome Research, 2008-03, Vol.18 (3), p.431-441

2008

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Enhancer loops appear stable during development and are associated with paused polymerase

Nature (London), 2014-08, Vol.512 (7512), p.96-100

2014

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3D genome organisation in Drosophila

Briefings in functional genomics, 2020-03, Vol.19 (2), p.92-100

2020

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m6A RNA methylation regulates promoter- proximal pausing of RNA polymerase II

Molecular cell, 2021-08, Vol.81 (16), p.3356-3367.e6

2021

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Enhancer-promoter interactions can form independently of genomic distance and be functional across TAD boundaries

Nucleic acids research, 2024-02, Vol.52 (4), p.1702

2024

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Genome-wide location analysis reveals a role of TFIIS in RNA polymerase III transcription

Genes & development, 2008-07, Vol.22 (14), p.1934-1947

2008

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Chromatin gene-gene loops support the cross-regulation of genes with related function

Molecular cell, 2024-03, Vol.84 (5), p.822-838.e8

2024

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Dual topologies of myotomal collagen XV and Tenascin C act in concert to guide and shape developing motor axons

Proceedings of the National Academy of Sciences - PNAS, 2024-03, Vol.121 (13), p.e2314588121

2024

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Mediator-Dependent Recruitment of TFIIH Modules in Preinitiation Complex

Molecular cell, 2008-08, Vol.31 (3), p.337-346

2008

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Correction: Corrigendum: Enhancer loops appear stable during development and are associated with paused polymerase.(Correction notice)

Nature (London), 2016-09, Vol.537 (7619), p.254

2016

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Erratum: Corrigendum: Enhancer loops appear stable during development and are associated with paused polymerase

Nature (London), 2016-07, Vol.537 (7619), p.254-254

2016

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Genomic binding of Pol III transcription machinery and relationship with TFIIS transcription factor distribution in mouse embryonic stem cells

Nucleic acids research, 2012-01, Vol.40 (1), p.270

2012

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Corrigendum: Enhancer loops appear stable during development and are associated with paused polymerase

Nature (London), 2016-09, Vol.537 (7619), p.254-254

2016

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Chromatin Immunoprecipitation for Analyzing Transcription Factor Binding and Histone Modifications in Drosophila

Methods in molecular biology (Clifton, N.J.), 2016-01, Vol.1478, p.263

2016

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Identification and in silico modeling of enhancers reveals new features of the cardiac differentiation network

Development (Cambridge), 2016-12, Vol.143 (23), p.4533-4542

2016

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Sequential actions of EOMES and T-BET promote stepwise maturation of natural killer cells

Highly rearranged chromosomes reveal uncoupling between genome topology and gene expression

Tissue-specific analysis of chromatin state identifies temporal signatures of enhancer activity during embryonic development

Dual functionality of cis -regulatory elements as developmental enhancers and Polycomb response elements

FourCSeq: analysis of 4C sequencing data

Chromosome topology guides the Drosophila Dosage Compensation Complex for target gene activation

Zeb1 represses TCR signaling, promotes the proliferation of T cell progenitors and is essential for NK1.1 + T cell development

PHD and TFIIS-Like domains of the Bye1 transcription factor determine its multivalent genomic distribution

Mutations of RNA polymerase II activate key genes of the nucleoside triphosphate biosynthetic pathways

Functional Consequences of Chromosomal Rearrangements on Gene Expression: Not So Deleterious After All?

Multigenome analysis identifies a worldwide distributed epidemic Legionella pneumophila clone that emerged within a highly diverse species

Enhancer loops appear stable during development and are associated with paused polymerase

3D genome organisation in Drosophila

m6A RNA methylation regulates promoter- proximal pausing of RNA polymerase II

Enhancer-promoter interactions can form independently of genomic distance and be functional across TAD boundaries

Genome-wide location analysis reveals a role of TFIIS in RNA polymerase III transcription

Chromatin gene-gene loops support the cross-regulation of genes with related function

Dual topologies of myotomal collagen XV and Tenascin C act in concert to guide and shape developing motor axons

Mediator-Dependent Recruitment of TFIIH Modules in Preinitiation Complex

Correction: Corrigendum: Enhancer loops appear stable during development and are associated with paused polymerase.(Correction notice)

Erratum: Corrigendum: Enhancer loops appear stable during development and are associated with paused polymerase

Genomic binding of Pol III transcription machinery and relationship with TFIIS transcription factor distribution in mouse embryonic stem cells

Corrigendum: Enhancer loops appear stable during development and are associated with paused polymerase

Chromatin Immunoprecipitation for Analyzing Transcription Factor Binding and Histone Modifications in Drosophila

Identification and in silico modeling of enhancers reveals new features of the cardiac differentiation network

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