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Meta-Analysis of Arabidopsis thaliana Phospho-Proteomics Data Reveals Compartmentalization of Phosphorylation Motifs

The Plant cell, 2014-06, Vol.26 (6), p.2367-2389

2014

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A zinc finger motif-containing protein is essential for chloroplast RNA editing

PLoS genetics, 2015-03, Vol.11 (3), p.e1005028-e1005028

2015

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Reconstruction of Metabolic Pathways, Protein Expression, and Homeostasis Machineries across Maize Bundle Sheath and Mesophyll Chloroplasts: Large-Scale Quantitative Proteomics Using the First Maize Genome Assembly

Plant physiology (Bethesda), 2010-03, Vol.152 (3), p.1219-1250

2010

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PPDB, the Plant Proteomics Database at Cornell

Nucleic acids research, 2009-01, Vol.37 (Database issue), p.D969-D974

2009

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RIP1, a member of an Arabidopsis protein family, interacts with the protein RARE1 and broadly affects RNA editing

Proceedings of the National Academy of Sciences - PNAS, 2012-05, Vol.109 (22), p.8372-8373

2012

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Discovery of a Unique Clp Component, ClpF, in Chloroplasts: A Proposed Binary ClpF-ClpS1 Adaptor Complex Functions in Substrate Recognition and Delivery

The Plant cell, 2015-10, Vol.27 (10), p.2677-2691

2015

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Sorting signals, N-terminal modifications and abundance of the chloroplast proteome

PloS one, 2008-04, Vol.3 (4), p.e1994-e1994

2008

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Nucleoid-Enriched Proteomes in Developing Plastids and Chloroplasts from Maize Leaves: A New Conceptual Framework for Nucleoid Functions

Plant physiology (Bethesda), 2012-01, Vol.158 (1), p.156-189

2012

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Structural and Metabolic Transitions of C₄ Leaf Development and Differentiation Defined by Microscopy and Quantitative Proteomics in Maize

The Plant cell, 2010-11, Vol.22 (11), p.3509-3542

2010

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MET1 Is a Thylakoid-Associated TPR Protein Involved in Photosystem II Supercomplex Formation and Repair in Arabidopsis

The Plant cell, 2015-01, Vol.27 (1), p.262-285

2015

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Identification of multiple salicylic acid-binding proteins using two high throughput screens

Frontiers in plant science, 2015-01, Vol.5, p.777-777

2015

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plant-specific RNA-binding domain revealed through analysis of chloroplast group II intron splicing

Proceedings of the National Academy of Sciences - PNAS, 2009-03, Vol.106 (11), p.4537-4542

2009

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Structures, Functions, and Interactions of ClpT1 and ClpT2 in the Clp Protease System of Arabidopsis Chloroplasts

The Plant cell, 2015-05, Vol.27 (5), p.1477-1496

2015

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Salicylic Acid Inhibits the Replication of Tomato bushy stunt virus by Directly Targeting a Host Component in the Replication Complex

Molecular plant-microbe interactions, 2015-04, Vol.28 (4), p.379-386

2015

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Large Scale Comparative Proteomics of a Chloroplast Clp Protease Mutant Reveals Folding Stress, Altered Protein Homeostasis, and Feedback Regulation of Metabolism

Molecular & cellular proteomics, 2009-08, Vol.8 (8), p.1789-1810

2009

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APO1 Promotes the Splicing of Chloroplast Group II Introns and Harbors a Plant-Specific Zinc-Dependent RNA Binding Domain

The Plant cell, 2011-03, Vol.23 (3), p.1082-1092

2011

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Developmental and Subcellular Organization of Single-Cell C4 Photosynthesis in Bienertia sinuspersici Determined by Large-Scale Proteomics and cDNA Assembly from 454 DNA Sequencing

Journal of proteome research, 2015-05, Vol.14 (5), p.2090-2108

2015

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Central Functions of the Lumenal and Peripheral Thylakoid Proteome of Arabidopsis Determined by Experimentation and Genome-Wide Prediction

The Plant cell, 2002-01, Vol.14 (1), p.211-236

2002

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Posttranslational Protein Modifications in Plant Metabolism

Plant physiology (Bethesda), 2015-11, Vol.169 (3), p.1469-1487

2015

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Ribonuclease III Domain Protein Functions in Group II Intron Splicing in Maize Chloroplasts

The Plant cell, 2007-08, Vol.19 (8), p.2606-2623

2007

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Clp Protease Complexes from Photosynthetic and Non-photosynthetic Plastids and Mitochondria of Plants, Their Predicted Three-dimensional Structures, and Functional Implications

The Journal of biological chemistry, 2004-02, Vol.279 (6), p.4768-4781

2004

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The workflow for quantitative proteome analysis of chloroplast development and differentiation, chloroplast mutants, and protein interactions by spectral counting

Methods in molecular biology (Clifton, N.J.), 2011, Vol.775, p.265

2011

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Proteomics of the Chloroplast: Systematic Identification and Targeting Analysis of Lumenal and Peripheral Thylakoid Proteins

The Plant cell, 2000-03, Vol.12 (3), p.319-341

2000

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Extreme variation in rates of evolution in the plastid Clp protease complex

The Plant journal : for cell and molecular biology, 2019-04, Vol.98 (2), p.243-259

2019

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The CLP and PREP protease systems coordinate maturation and degradation of the chloroplast proteome in Arabidopsis thaliana

The New phytologist, 2022-11, Vol.236 (4), p.1339-1357

2022

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Meta-Analysis of Arabidopsis thaliana Phospho-Proteomics Data Reveals Compartmentalization of Phosphorylation Motifs

A zinc finger motif-containing protein is essential for chloroplast RNA editing

Reconstruction of Metabolic Pathways, Protein Expression, and Homeostasis Machineries across Maize Bundle Sheath and Mesophyll Chloroplasts: Large-Scale Quantitative Proteomics Using the First Maize Genome Assembly

PPDB, the Plant Proteomics Database at Cornell

RIP1, a member of an Arabidopsis protein family, interacts with the protein RARE1 and broadly affects RNA editing

Discovery of a Unique Clp Component, ClpF, in Chloroplasts: A Proposed Binary ClpF-ClpS1 Adaptor Complex Functions in Substrate Recognition and Delivery

Sorting signals, N-terminal modifications and abundance of the chloroplast proteome

Nucleoid-Enriched Proteomes in Developing Plastids and Chloroplasts from Maize Leaves: A New Conceptual Framework for Nucleoid Functions

Structural and Metabolic Transitions of C₄ Leaf Development and Differentiation Defined by Microscopy and Quantitative Proteomics in Maize

MET1 Is a Thylakoid-Associated TPR Protein Involved in Photosystem II Supercomplex Formation and Repair in Arabidopsis

Identification of multiple salicylic acid-binding proteins using two high throughput screens

plant-specific RNA-binding domain revealed through analysis of chloroplast group II intron splicing

Structures, Functions, and Interactions of ClpT1 and ClpT2 in the Clp Protease System of Arabidopsis Chloroplasts

Salicylic Acid Inhibits the Replication of Tomato bushy stunt virus by Directly Targeting a Host Component in the Replication Complex

Large Scale Comparative Proteomics of a Chloroplast Clp Protease Mutant Reveals Folding Stress, Altered Protein Homeostasis, and Feedback Regulation of Metabolism

APO1 Promotes the Splicing of Chloroplast Group II Introns and Harbors a Plant-Specific Zinc-Dependent RNA Binding Domain

Developmental and Subcellular Organization of Single-Cell C4 Photosynthesis in Bienertia sinuspersici Determined by Large-Scale Proteomics and cDNA Assembly from 454 DNA Sequencing

Central Functions of the Lumenal and Peripheral Thylakoid Proteome of Arabidopsis Determined by Experimentation and Genome-Wide Prediction

Posttranslational Protein Modifications in Plant Metabolism

Ribonuclease III Domain Protein Functions in Group II Intron Splicing in Maize Chloroplasts

Clp Protease Complexes from Photosynthetic and Non-photosynthetic Plastids and Mitochondria of Plants, Their Predicted Three-dimensional Structures, and Functional Implications

The workflow for quantitative proteome analysis of chloroplast development and differentiation, chloroplast mutants, and protein interactions by spectral counting

Proteomics of the Chloroplast: Systematic Identification and Targeting Analysis of Lumenal and Peripheral Thylakoid Proteins

Extreme variation in rates of evolution in the plastid Clp protease complex

The CLP and PREP protease systems coordinate maturation and degradation of the chloroplast proteome in Arabidopsis thaliana

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