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JASPAR 2020: update of the open-access database of transcription factor binding profiles

Nucleic acids research, 2020-01, Vol.48 (D1), p.D87

2020

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JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework

Nucleic acids research, 2018-01, Vol.46 (D1), p.D260

2018

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JASPAR 2022: the 9th release of the open-access database of transcription factor binding profiles

Nucleic acids research, 2022-01, Vol.50 (D1), p.D165

2022

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JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles

Nucleic acids research, 2016-01, Vol.44 (D1), p.D110

2016

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Biologically relevant transfer learning improves transcription factor binding prediction

Genome Biology, 2021-09, Vol.22 (1), p.280-280, Article 280

2021

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Insights gained from a comprehensive all-against-all transcription factor binding motif benchmarking study

Genome Biology, 2020-05, Vol.21 (1), p.114-114, Article 114

2020

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ExplaiNN: interpretable and transparent neural networks for genomics

Genome Biology, 2023-06, Vol.24 (1), p.154-154, Article 154

2023

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Human MiniPromoters for ocular-rAAV expression in ON bipolar, cone, corneal, endothelial, Müller glial, and PAX6 cells

Gene therapy, 2021-06, Vol.28 (6), p.351-372

2021

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Human progranulin-expressing mice as a novel tool for the development of progranulin-modulating therapeutics

Neurobiology of disease, 2021-06, Vol.153, p.105314-105314, Article 105314

2021

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SPServer: split-statistical potentials for the analysis of protein structures and protein-protein interactions

BMC bioinformatics, 2021-01, Vol.22 (1), p.4-13, Article 4

2021

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Cross-species examination of X-chromosome inactivation highlights domains of escape from silencing

Epigenetics & chromatin, 2021-02, Vol.14 (1), p.12-12, Article 12

2021

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On the Use of Knowledge-Based Potentials for the Evaluation of Models of Protein–Protein, Protein–DNA, and Protein–RNA Interactions

Advances in Protein Chemistry and Structural Biology, 2014, Vol.94, p.77-120

2014

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SBILib: a handle for protein modeling and engineering

Bioinformatics (Oxford, England), 2023-10, Vol.39 (10)

2023

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JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles

Nucleic acids research, 2024-01, Vol.52 (D1), p.D174

2024

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Gene expression models based on transcription factor binding events confer insight into functional cis-regulatory variants

Bioinformatics, 2019-08, Vol.35 (15), p.2610-2617

2019

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Evaluating the impact of single nucleotide variants on transcription factor binding

Nucleic acids research, 2016-12, Vol.44 (21), p.10106

2016

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Knowledge environments representing molecular entities for the virtual physiological human

Philosophical transactions of the Royal Society of London. Series A: Mathematical, physical, and engineering sciences, 2008-09, Vol.366 (1878), p.3091-3110

2008

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c-Myc is a novel Leishmania virulence factor by proxy that targets the host miRNA system and is essential for survival in human macrophages

The Journal of biological chemistry, 2018-08, Vol.293 (33), p.12805-12819

2018

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Human germline heterozygous gain-of-function STAT6 variants cause severe allergic disease

The Journal of experimental medicine, 2023-05, Vol.220 (5)

2023

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OnTarget: in silico design of MiniPromoters for targeted delivery of expression

Nucleic acids research, 2023-07, Vol.51 (W1), p.W379

2023

Volltextzugriff (PDF)

A GO catalogue of human DNA-binding transcription factors

Biochimica et biophysica acta. Gene regulatory mechanisms, 2021-11, Vol.1864 (11-12), p.194765-194765, Article 194765

2021

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GeneBreaker: Variant simulation to improve the diagnosis of Mendelian rare genetic diseases

Human mutation, 2021-04, Vol.42 (4), p.346-358

2021

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MANTA2, update of the Mongo database for the analysis of transcription factor binding site alterations

Nature (London), 2018

2018

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Linkage analysis identifies an isolated strabismus locus at 14q12 overlapping with FOXG1 syndrome region

Journal of medical genetics, 2022-01, Vol.59 (1), p.46

2022

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New MiniPromoter Ple345 (NEFL) Drives Strong and Specific Expression in Retinal Ganglion Cells of Mouse and Primate Retina

Human gene therapy, 2019-03, Vol.30 (3), p.257

2019

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JASPAR 2020: update of the open-access database of transcription factor binding profiles

JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework

JASPAR 2022: the 9th release of the open-access database of transcription factor binding profiles

JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles

Biologically relevant transfer learning improves transcription factor binding prediction

Insights gained from a comprehensive all-against-all transcription factor binding motif benchmarking study

ExplaiNN: interpretable and transparent neural networks for genomics

Human MiniPromoters for ocular-rAAV expression in ON bipolar, cone, corneal, endothelial, Müller glial, and PAX6 cells

Human progranulin-expressing mice as a novel tool for the development of progranulin-modulating therapeutics

SPServer: split-statistical potentials for the analysis of protein structures and protein-protein interactions

Cross-species examination of X-chromosome inactivation highlights domains of escape from silencing

On the Use of Knowledge-Based Potentials for the Evaluation of Models of Protein–Protein, Protein–DNA, and Protein–RNA Interactions

SBILib: a handle for protein modeling and engineering

JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles

Gene expression models based on transcription factor binding events confer insight into functional cis-regulatory variants

Evaluating the impact of single nucleotide variants on transcription factor binding

Knowledge environments representing molecular entities for the virtual physiological human

c-Myc is a novel Leishmania virulence factor by proxy that targets the host miRNA system and is essential for survival in human macrophages

Human germline heterozygous gain-of-function STAT6 variants cause severe allergic disease

OnTarget: in silico design of MiniPromoters for targeted delivery of expression

A GO catalogue of human DNA-binding transcription factors

GeneBreaker: Variant simulation to improve the diagnosis of Mendelian rare genetic diseases

MANTA2, update of the Mongo database for the analysis of transcription factor binding site alterations

Linkage analysis identifies an isolated strabismus locus at 14q12 overlapping with FOXG1 syndrome region

New MiniPromoter Ple345 (NEFL) Drives Strong and Specific Expression in Retinal Ganglion Cells of Mouse and Primate Retina

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