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Advances in Plant Omics and Systems Biology Approaches

Vischi Winck, Flavia

1, 2022

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Reshaping the research landscape in Brazil

eLife, 2023-07, Vol.12

2023

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Genome-wide identification of regulatory elements and reconstruction of gene regulatory networks of the green alga Chlamydomonas reinhardtii under carbon deprivation

PloS one, 2013-11, Vol.8 (11), p.e79909-e79909

2013

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A step-by-step protocol for formaldehyde-assisted isolation of regulatory elements from Arabidopsis thaliana

Journal of integrative plant biology, 2014-06, Vol.56 (6), p.527-538

2014

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Growth and saxitoxin production responses to copper (CuCl2) exposure by the cyanobacterium Raphidiopsis raciborskii

Journal of applied phycology, 2021-04, Vol.33 (2), p.891-900

2021

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From Feasting to Fasting: The Arginine Pathway as a Metabolic Switch in Nitrogen-Deprived Chlamydomonas reinhardtii

Cells (Basel, Switzerland), 2023-05, Vol.12 (10), p.1379

2023

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Xylella fastidiosa disturbs nitrogen metabolism and causes a stress response in sweet orange Citrus sinensis cv. Pêra

Journal of experimental botany, 2007-09, Vol.58 (11), p.2733-2744

2007

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Microalgal co-cultivation -recent methods, trends in omic-studies, applications, and future challenges

Frontiers in bioengineering and biotechnology, 2023-09, Vol.11, p.1193424-1193424

2023

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Carbon acquisition and accumulation in microalgae Chlamydomonas: Insights from “omics” approaches

Journal of proteomics, 2013-12, Vol.94, p.207-218

2013

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Gene regulatory networks on transfer entropy (GRNTE): a novel approach to reconstruct gene regulatory interactions applied to a case study for the plant pathogen Phytophthora infestans

Theoretical biology and medical modelling, 2019-04, Vol.16 (1), p.7-7, Article 7

2019

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Subcellular Proteomics as a Unified Approach of Experimental Localizations and Computed Prediction Data for Arabidopsis and Crop Plants

Advances in Plant Omics and Systems Biology Approaches, 2021, Vol.1346, p.67-89

2021

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Correction: Genome-Wide Identification of Regulatory Elements and Reconstruction of Gene Regulatory Networks of the Green Alga Chlamydomonas reinhardtii under Carbon Deprivation

PloS one, 2014-01, Vol.9 (1)

2014

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Advances in Microalgae Biology and Sustainable Applications

2016

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Plant Proteomics and Systems Biology

Advances in Plant Omics and Systems Biology Approaches, 2021, Vol.1346, p.51-66

2021

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Contribution of Omics and Systems Biology to Plant Biotechnology

Advances in Plant Omics and Systems Biology Approaches, 2021, Vol.1346, p.171-188

2021

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Introduction: Advances in Plant Omics and Systems Biology

Advances in Plant Omics and Systems Biology Approaches, 2021, Vol.1346, p.1-9

2021

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Modern Approaches for Transcriptome Analyses in Plants

Advances in Plant Omics and Systems Biology Approaches, 2021, Vol.1346, p.11-50

2021

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Interactomes: Experimental and In Silico Approaches

Advances in Plant Omics and Systems Biology Approaches, 2021, Vol.1346, p.107-117

2021

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The Contribution of Metabolomics to Systems Biology: Current Applications Bridging Genotype and Phenotype in Plant Science

Advances in Plant Omics and Systems Biology Approaches, 2021, Vol.1346, p.91-105

2021

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Cataloging Posttranslational Modifications in Plant Histones

Advances in Plant Omics and Systems Biology Approaches, 2021, Vol.1346, p.131-154

2021

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Current Challenges in Plant Systems Biology

Advances in Plant Omics and Systems Biology Approaches, 2021, Vol.1346, p.155-170

2021

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Probabilistic Graphical Models Applied to Biological Networks

Advances in Plant Omics and Systems Biology Approaches, 2021, Vol.1346, p.119-130

2021

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Proteome analysis of the plant pathogen Xylella fastidiosa reveals major cellular and extracellular proteins and a peculiar codon bias distribution

Proteomics (Weinheim), 2003-02, Vol.3 (2), p.224-237

2003

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Advances in Plant Omics and Systems Biology Approaches

Reshaping the research landscape in Brazil

The experience of teaching introductory programming skills to bioscientists in Brazil

Genome-wide identification of regulatory elements and reconstruction of gene regulatory networks of the green alga Chlamydomonas reinhardtii under carbon deprivation

A step-by-step protocol for formaldehyde-assisted isolation of regulatory elements from Arabidopsis thaliana

Growth and saxitoxin production responses to copper (CuCl2) exposure by the cyanobacterium Raphidiopsis raciborskii

From Feasting to Fasting: The Arginine Pathway as a Metabolic Switch in Nitrogen-Deprived Chlamydomonas reinhardtii

Xylella fastidiosa disturbs nitrogen metabolism and causes a stress response in sweet orange Citrus sinensis cv. Pêra

Microalgal co-cultivation -recent methods, trends in omic-studies, applications, and future challenges

Carbon acquisition and accumulation in microalgae Chlamydomonas: Insights from “omics” approaches

Gene regulatory networks on transfer entropy (GRNTE): a novel approach to reconstruct gene regulatory interactions applied to a case study for the plant pathogen Phytophthora infestans

Subcellular Proteomics as a Unified Approach of Experimental Localizations and Computed Prediction Data for Arabidopsis and Crop Plants

Correction: Genome-Wide Identification of Regulatory Elements and Reconstruction of Gene Regulatory Networks of the Green Alga Chlamydomonas reinhardtii under Carbon Deprivation

Advances in Microalgae Biology and Sustainable Applications

Plant Proteomics and Systems Biology

Contribution of Omics and Systems Biology to Plant Biotechnology

Introduction: Advances in Plant Omics and Systems Biology

Modern Approaches for Transcriptome Analyses in Plants

Interactomes: Experimental and In Silico Approaches

The Contribution of Metabolomics to Systems Biology: Current Applications Bridging Genotype and Phenotype in Plant Science

Cataloging Posttranslational Modifications in Plant Histones

Current Challenges in Plant Systems Biology

Probabilistic Graphical Models Applied to Biological Networks

Proteome analysis of the plant pathogen Xylella fastidiosa reveals major cellular and extracellular proteins and a peculiar codon bias distribution

Systems Analysis of the Response of Photosynthesis, Metabolism, and Growth to an Increase in Irradiance in the Photosynthetic Model Organism Chlamydomonas reinhardtii

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