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Using linkage maps to correct and scaffold de novo genome assemblies: methods, challenges, and computational tools

Frontiers in genetics, 2015-06, Vol.6, p.220-220

Fierst, Janna L

2015

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Reproductive Mode and the Evolution of Genome Size and Structure in Caenorhabditis Nematodes

PLoS genetics, 2015-06, Vol.11 (6), p.e1005323-e1005323

2015

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Decontaminating eukaryotic genome assemblies with machine learning

BMC bioinformatics, 2017-12, Vol.18 (1), p.533-533, Article 533

2017

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De Novo Genome Assemblies for Three North American Bumble Bee Species: Bombus bifarius , Bombus vancouverensis , and Bombus vosnesenskii

G3 : genes - genomes - genetics, 2020-08, Vol.10 (8), p.2585-2592

2020

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Caenorhabditis elegans dauers vary recovery in response to bacteria from natural habitat

Ecology and evolution, 2020-09, Vol.10 (18), p.9886-9895

2020

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Detection of Diazotrophy in the Acetylene-Fermenting Anaerobe Pelobacter sp. Strain SFB93

Applied and environmental microbiology, 2017-09, Vol.83 (17)

2017

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Complex pleiotropic genetic architecture of evolved heat stress and oxidative stress resistance in the nematode Caenorhabditis remanei

G3 : genes - genomes - genetics, 2021-04, Vol.11 (4)

2021

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Optimizing experimental design for genome sequencing and assembly with Oxford Nanopore Technologies

GigaByte (Hong Kong, China), 2021-07, Vol.2021, p.gigabyte27-26

2021

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Correction: Reproductive Mode and the Evolution of Genome Size and Structure in Caenorhabditis Nematodes

PLoS genetics, 2015-09, Vol.11 (9), p.e1005497-e1005497

2015

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REVIEW OF THE DAUER HYPOTHESIS: WHAT NON-PARASITIC SPECIES CAN TELL US ABOUT THE EVOLUTION OF PARASITISM

The Journal of parasitology, 2021-09, Vol.107 (5), p.717

2021

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SEXUAL SELECTION ACCELERATES THE ELIMINATION OF A DELETERIOUS MUTANT IN DROSOPHILA MELANOGASTER

Evolution, 2009-02, Vol.63 (2), p.324-333

2009

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Environmental stress maintains trioecy in nematode worms

Evolution, 2020-03, Vol.74 (3), p.518-527

2020

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Genome Evolution: On the Road to Parasitism

Current biology, 2020-03, Vol.30 (6), p.R272-R274

2020

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Genome Size Changes by Duplication, Divergence, and Insertion in Caenorhabditis Worms

Molecular biology and evolution, 2023-03, Vol.40 (3)

2023

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Slow Recovery from Inbreeding Depression Generated by the Complex Genetic Architecture of Segregating Deleterious Mutations

Molecular biology and evolution, 2022-01, Vol.39 (1)

2022

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Acetylenotrophic and Diazotrophic Bradyrhizobium sp. Strain I71 from TCE-Contaminated Soils

Applied and environmental microbiology, 2022-11, Vol.88 (22), p.e0121922

2022

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Rebalancing Redox to Improve Biobutanol Production by Clostridium tyrobutyricum

Bioengineering (Basel), 2015-12, Vol.3 (1), p.2

2015

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Variance in epistasis links gene regulation and evolutionary rate in the yeast genetic interaction network

Genome biology and evolution, 2012-01, Vol.4 (11), p.1080-1087

2012

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Syntrophotalea acetylenivorans sp. nov., a diazotrophic, acetylenotrophic anaerobe isolated from intertidal sediments

International journal of systematic and evolutionary microbiology, 2021-01, Vol.71 (3)

2021

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Female mating preferences determine system-level evolution in a gene network model

Genetica, 2013-06, Vol.141 (4-6), p.157-170

Fierst, Janna L

2013

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GENETIC ARCHITECTURE AND POSTZYGOTIC REPRODUCTIVE ISOLATION: EVOLUTION OF BATESON-DOBZHANSKY-MULLER INCOMPATIBILITIES IN A POLYGENIC MODEL

Evolution, 2010-03, Vol.64 (3), p.675-693

2010

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Age-dependent impairment of disease tolerance is associated with a robust transcriptional response following RNA virus infection in Drosophila

G3 : genes - genomes - genetics, 2021-07, Vol.11 (7)

2021

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Acetylenotrophy: a hidden but ubiquitous microbial metabolism?

FEMS microbiology ecology, 2018-08, Vol.94 (8), p.1

2018

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Modeling the evolution of complex genetic systems: The gene network family tree

Journal of experimental zoology. Part B, Molecular and developmental evolution, 2015-01, Vol.324 (1), p.1-12

2015

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Complete Genome Sequence of Rhodococcus opacus Strain MoAcy1 (DSM 44186), an Aerobic Acetylenotroph Isolated from Soil

Microbiology resource announcements, 2022-01, Vol.11 (1), p.e0081421-e0081421

2022

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Using linkage maps to correct and scaffold de novo genome assemblies: methods, challenges, and computational tools

Reproductive Mode and the Evolution of Genome Size and Structure in Caenorhabditis Nematodes

Decontaminating eukaryotic genome assemblies with machine learning

De Novo Genome Assemblies for Three North American Bumble Bee Species: Bombus bifarius , Bombus vancouverensis , and Bombus vosnesenskii

Caenorhabditis elegans dauers vary recovery in response to bacteria from natural habitat

Detection of Diazotrophy in the Acetylene-Fermenting Anaerobe Pelobacter sp. Strain SFB93

Complex pleiotropic genetic architecture of evolved heat stress and oxidative stress resistance in the nematode Caenorhabditis remanei

Optimizing experimental design for genome sequencing and assembly with Oxford Nanopore Technologies

Correction: Reproductive Mode and the Evolution of Genome Size and Structure in Caenorhabditis Nematodes

REVIEW OF THE DAUER HYPOTHESIS: WHAT NON-PARASITIC SPECIES CAN TELL US ABOUT THE EVOLUTION OF PARASITISM

SEXUAL SELECTION ACCELERATES THE ELIMINATION OF A DELETERIOUS MUTANT IN DROSOPHILA MELANOGASTER

Environmental stress maintains trioecy in nematode worms

Genome Evolution: On the Road to Parasitism

Genome Size Changes by Duplication, Divergence, and Insertion in Caenorhabditis Worms

Slow Recovery from Inbreeding Depression Generated by the Complex Genetic Architecture of Segregating Deleterious Mutations

Acetylenotrophic and Diazotrophic Bradyrhizobium sp. Strain I71 from TCE-Contaminated Soils

Rebalancing Redox to Improve Biobutanol Production by Clostridium tyrobutyricum

Variance in epistasis links gene regulation and evolutionary rate in the yeast genetic interaction network

Syntrophotalea acetylenivorans sp. nov., a diazotrophic, acetylenotrophic anaerobe isolated from intertidal sediments

Female mating preferences determine system-level evolution in a gene network model

GENETIC ARCHITECTURE AND POSTZYGOTIC REPRODUCTIVE ISOLATION: EVOLUTION OF BATESON-DOBZHANSKY-MULLER INCOMPATIBILITIES IN A POLYGENIC MODEL

Age-dependent impairment of disease tolerance is associated with a robust transcriptional response following RNA virus infection in Drosophila

Acetylenotrophy: a hidden but ubiquitous microbial metabolism?

Modeling the evolution of complex genetic systems: The gene network family tree

Complete Genome Sequence of Rhodococcus opacus Strain MoAcy1 (DSM 44186), an Aerobic Acetylenotroph Isolated from Soil

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