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Bistability, Bifurcations, and Waddington's Epigenetic Landscape

Current biology, 2012-06, Vol.22 (11), p.R458-R466

Ferrell, James E.

2012

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Mechanisms of specificity in protein phosphorylation

Nature reviews. Molecular cell biology, 2007-07, Vol.8 (7), p.530-541

2007

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Mitotic trigger waves and the spatial coordination of the Xenopus cell cycle

Nature (London), 2013-08, Vol.500 (7464), p.603-607

2013

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Modeling the Cell Cycle: Why Do Certain Circuits Oscillate?

Cell, 2011-03, Vol.144 (6), p.874-885

2011

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Apoptosis propagates through the cytoplasm as trigger waves

Science (American Association for the Advancement of Science), 2018-08, Vol.361 (6402), p.607-612

2018

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A Mechanism for the Evolution of Phosphorylation Sites

Cell, 2011-11, Vol.147 (4), p.934-946

2011

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Robust, Tunable Biological Oscillations from Interlinked Positive and Negative Feedback Loops

Science (American Association for the Advancement of Science), 2008-07, Vol.321 (5885), p.126-129

2008

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The Cdk1-APC/C cell cycle oscillator circuit functions as a time-delayed, ultrasensitive switch

Nature cell biology, 2013-05, Vol.15 (5), p.519

2013

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Spatial Positive Feedback at the Onset of Mitosis

Cell, 2012-06, Vol.149 (7), p.1500-1513

2012

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Ultrafast distant wound response is essential for whole-body regeneration

Cell, 2023-08, Vol.186 (17), p.3606-3618.e16

2023

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Ultrasensitivity part II: multisite phosphorylation, stoichiometric inhibitors, and positive feedback

Trends in biochemical sciences (Amsterdam. Regular ed.), 2014-11, Vol.39 (11), p.556-569

2014

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Ultrasensitivity part I: Michaelian responses and zero-order ultrasensitivity

Trends in biochemical sciences (Amsterdam. Regular ed.), 2014-10, Vol.39 (10), p.496-503

2014

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Spatial trigger waves: positive feedback gets you a long way

Molecular biology of the cell, 2014-11, Vol.25 (22), p.3486-3493

2014

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Ultrasensitivity part III: cascades, bistable switches, and oscillators

Trends in biochemical sciences (Amsterdam. Regular ed.), 2014-12, Vol.39 (12), p.612-618

2014

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Changes in oscillatory dynamics in the cell cycle of early Xenopus laevis embryos

PLoS biology, 2014-02, Vol.12 (2), p.e1001788-e1001788

2014

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The roles of cyclin A2, B1, and B2 in early and late mitotic events

Molecular biology of the cell, 2010-09, Vol.21 (18), p.3149-3161

2010

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Spontaneous emergence of cell-like organization in Xenopus egg extracts

Science (American Association for the Advancement of Science), 2019-11, Vol.366 (6465), p.631-637

2019

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C. elegans colony formation as a condensation phenomenon

Nature communications, 2021-08, Vol.12 (1), p.4947-4947, Article 4947

2021

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Perfect and Near-Perfect Adaptation in Cell Signaling

Cell systems, 2016-02, Vol.2 (2), p.62-67

Ferrell, James E.

2016

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Cytoplasmic organization promotes protein diffusion in Xenopus extracts

Nature communications, 2022-09, Vol.13 (1), p.5599-5599, Article 5599

2022

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Interlinked Fast and Slow Positive Feedback Loops Drive Reliable Cell Decisions

Science (American Association for the Advancement of Science), 2005-10, Vol.310 (5747), p.496-498

2005

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Bistable, Biphasic Regulation of PP2A-B55 Accounts for the Dynamics of Mitotic Substrate Phosphorylation

Current biology, 2021-02, Vol.31 (4), p.794-808.e6

2021

Volltextzugriff (PDF)

Viscosity-dependent control of protein synthesis and degradation

Nature communications, 2024-03, Vol.15 (1), p.2149-2149, Article 2149

2024

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Self-perpetuating states in signal transduction: positive feedback, double-negative feedback and bistability

Current Opinion in Cell Biology, 2002-04, Vol.14 (2), p.140-148

Ferrell, James E

2002

Volltextzugriff (PDF)

Feedback loops and reciprocal regulation: recurring motifs in the systems biology of the cell cycle

Current opinion in cell biology, 2013-12, Vol.25 (6), p.676-686

Ferrell, James E

2013

Volltextzugriff (PDF)

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Bistability, Bifurcations, and Waddington's Epigenetic Landscape

Mechanisms of specificity in protein phosphorylation

Mitotic trigger waves and the spatial coordination of the Xenopus cell cycle

Modeling the Cell Cycle: Why Do Certain Circuits Oscillate?

Apoptosis propagates through the cytoplasm as trigger waves

A Mechanism for the Evolution of Phosphorylation Sites

Robust, Tunable Biological Oscillations from Interlinked Positive and Negative Feedback Loops

The Cdk1-APC/C cell cycle oscillator circuit functions as a time-delayed, ultrasensitive switch

Spatial Positive Feedback at the Onset of Mitosis

Ultrafast distant wound response is essential for whole-body regeneration

Ultrasensitivity part II: multisite phosphorylation, stoichiometric inhibitors, and positive feedback

Ultrasensitivity part I: Michaelian responses and zero-order ultrasensitivity

Spatial trigger waves: positive feedback gets you a long way

Ultrasensitivity part III: cascades, bistable switches, and oscillators

Changes in oscillatory dynamics in the cell cycle of early Xenopus laevis embryos

The roles of cyclin A2, B1, and B2 in early and late mitotic events

Spontaneous emergence of cell-like organization in Xenopus egg extracts

C. elegans colony formation as a condensation phenomenon

Perfect and Near-Perfect Adaptation in Cell Signaling

Cytoplasmic organization promotes protein diffusion in Xenopus extracts

Interlinked Fast and Slow Positive Feedback Loops Drive Reliable Cell Decisions

Bistable, Biphasic Regulation of PP2A-B55 Accounts for the Dynamics of Mitotic Substrate Phosphorylation

Viscosity-dependent control of protein synthesis and degradation

Self-perpetuating states in signal transduction: positive feedback, double-negative feedback and bistability

Feedback loops and reciprocal regulation: recurring motifs in the systems biology of the cell cycle

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