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Transmission Network Parameters Estimated From HIV Sequences for a Nationwide Epidemic

The Journal of infectious diseases, 2011-11, Vol.204 (9), p.1463-1469

2011

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Effect of HIV-1 Subtype on Virologic and Immunologic Response to Starting Highly Active Antiretroviral Therapy

Clinical infectious diseases, 2009-05, Vol.48 (9), p.1296-1305

2009

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The contribution of viral genotype to plasma viral set-point in HIV infection

PLoS pathogens, 2014-05, Vol.10 (5), p.e1004112

2014

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A phylotype-based analysis highlights the role of drug-naive HIV-positive individuals in the transmission of antiretroviral resistance in the UK

AIDS (London), 2015-09, Vol.29 (15), p.1917-1925

2015

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Molecular phylodynamics of the heterosexual HIV epidemic in the United Kingdom

PLoS pathogens, 2009-09, Vol.5 (9), p.e1000590-e1000590

2009

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An evolutionary model-based algorithm for accurate phylogenetic breakpoint mapping and subtype prediction in HIV-1

PLoS computational biology, 2009-11, Vol.5 (11), p.e1000581-e1000581

2009

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Novel HIV-1 recombinants spreading across multiple risk groups in the United Kingdom: the identification and phylogeography of Circulating Recombinant Form (CRF) 50_A1D

PloS one, 2014-01, Vol.9 (1), p.e83337-e83337

2014

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Automated analysis of phylogenetic clusters

BMC bioinformatics, 2013-11, Vol.14 (1), p.317-317, Article 317

2013

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Population trends in the prevalence and patterns of protease resistance related to exposure to unboosted and boosted protease inhibitors

Antiviral therapy, 2008-01, Vol.13 (6), p.771-777

2008

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Integrase inhibitor (INI) genotypic resistance in treatment-naive and raltegravir-experienced patients infected with diverse HIV-1 clades

Journal of antimicrobial chemotherapy, 2015-11, Vol.70 (11), p.3080-3086

2015

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Evidence of Self-Sustaining Drug Resistant HIV-1 Lineages Among Untreated Patients in the United Kingdom

Clinical infectious diseases, 2015-09, Vol.61 (5), p.829-836

2015

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Transmission of Non-B HIV Subtypes in the United Kingdom Is Increasingly Driven by Large Non-Heterosexual Transmission Clusters

The Journal of infectious diseases, 2016-05, Vol.213 (9), p.1410-1418

2016

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Phylogenetic analyses reveal HIV-1 infections between men misclassified as heterosexual transmissions

AIDS (London), 2014-08, Vol.28 (13), p.1967-1975

2014

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Recent trends and patterns in HIV‐1 transmitted drug resistance in the United Kingdom

HIV medicine, 2017-03, Vol.18 (3), p.204-213

2017

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Persistence of HIV-1 Transmitted Drug Resistance Mutations

The Journal of infectious diseases, 2013-11, Vol.208 (9), p.1459-1463

2013

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Determining the Origins of Human Immunodeficiency Virus Type 1 Drug-resistant Minority Variants in People Who Are Recently Infected Using Phylogenetic Reconstruction

Clinical infectious diseases, 2019-09, Vol.69 (7), p.1136-1143

2019

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The Changing Epidemiological Profile of HIV-1 Subtype B Epidemic in Ukraine

AIDS research and human retroviruses, 2019-02, Vol.35 (2), p.155

2019

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Declining Prevalence of HIV-1 Drug Resistance in Antiretroviral Treatment-exposed Individuals in Western Europe

The Journal of infectious diseases, 2013-04, Vol.207 (8), p.1216-1220

2013

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Demonstration of Sustained Drug-Resistant Human Immunodeficiency Virus Type 1 Lineages Circulating among Treatment-Naïve Individuals

Journal of Virology, 2009-03, Vol.83 (6), p.2645-2654

2009

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HIV-1 drug resistance mutations emerging on darunavir therapy in PI-naive and -experienced patients in the UK

Journal of antimicrobial chemotherapy, 2016-12, Vol.71 (12), p.3487-3494

2016

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The impact of HIV-1 reverse transcriptase polymorphisms on responses to first-line nonnucleoside reverse transcriptase inhibitor-based therapy in HIV-1-infected adults

AIDS (London), 2013-09, Vol.27 (14), p.2245-2253

2013

Volltextzugriff (PDF)

Virological outcomes of boosted protease inhibitor-based first-line ART in subjects harbouring thymidine analogue-associated mutations as the sole form of transmitted drug resistance

Journal of antimicrobial chemotherapy, 2019-03, Vol.74 (3), p.746-753

2019

Volltextzugriff (PDF)

A Direct Comparison of Two Densely Sampled HIV Epidemics: The UK and Switzerland

Scientific reports, 2016-09, Vol.6 (1), p.32251-32251, Article 32251

2016

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A Phylogenetic Analysis of Human Immunodeficiency Virus Type 1 Sequences in Kiev: Findings Among Key Populations

Clinical infectious diseases, 2017-10, Vol.65 (7), p.1127-1135

2017

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The increasing genetic diversity of HIV-1 in the UK, 2002―2010

AIDS (London), 2014-03, Vol.28 (5), p.773-780

Anon

2014

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Transmission Network Parameters Estimated From HIV Sequences for a Nationwide Epidemic

Effect of HIV-1 Subtype on Virologic and Immunologic Response to Starting Highly Active Antiretroviral Therapy

The contribution of viral genotype to plasma viral set-point in HIV infection

A phylotype-based analysis highlights the role of drug-naive HIV-positive individuals in the transmission of antiretroviral resistance in the UK

Molecular phylodynamics of the heterosexual HIV epidemic in the United Kingdom

An evolutionary model-based algorithm for accurate phylogenetic breakpoint mapping and subtype prediction in HIV-1

Novel HIV-1 recombinants spreading across multiple risk groups in the United Kingdom: the identification and phylogeography of Circulating Recombinant Form (CRF) 50_A1D

Automated analysis of phylogenetic clusters

Population trends in the prevalence and patterns of protease resistance related to exposure to unboosted and boosted protease inhibitors

Integrase inhibitor (INI) genotypic resistance in treatment-naive and raltegravir-experienced patients infected with diverse HIV-1 clades

Evidence of Self-Sustaining Drug Resistant HIV-1 Lineages Among Untreated Patients in the United Kingdom

Transmission of Non-B HIV Subtypes in the United Kingdom Is Increasingly Driven by Large Non-Heterosexual Transmission Clusters

Phylogenetic analyses reveal HIV-1 infections between men misclassified as heterosexual transmissions

Recent trends and patterns in HIV‐1 transmitted drug resistance in the United Kingdom

Persistence of HIV-1 Transmitted Drug Resistance Mutations

Determining the Origins of Human Immunodeficiency Virus Type 1 Drug-resistant Minority Variants in People Who Are Recently Infected Using Phylogenetic Reconstruction

The Changing Epidemiological Profile of HIV-1 Subtype B Epidemic in Ukraine

Declining Prevalence of HIV-1 Drug Resistance in Antiretroviral Treatment-exposed Individuals in Western Europe

Demonstration of Sustained Drug-Resistant Human Immunodeficiency Virus Type 1 Lineages Circulating among Treatment-Naïve Individuals

HIV-1 drug resistance mutations emerging on darunavir therapy in PI-naive and -experienced patients in the UK

The impact of HIV-1 reverse transcriptase polymorphisms on responses to first-line nonnucleoside reverse transcriptase inhibitor-based therapy in HIV-1-infected adults

Virological outcomes of boosted protease inhibitor-based first-line ART in subjects harbouring thymidine analogue-associated mutations as the sole form of transmitted drug resistance

A Direct Comparison of Two Densely Sampled HIV Epidemics: The UK and Switzerland

A Phylogenetic Analysis of Human Immunodeficiency Virus Type 1 Sequences in Kiev: Findings Among Key Populations

The increasing genetic diversity of HIV-1 in the UK, 2002―2010

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