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Inferring the mammal tree: Species-level sets of phylogenies for questions in ecology, evolution, and conservation

PLoS biology, 2019-12, Vol.17 (12), p.e3000494-e3000494

2019

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The Challenges of Resolving a Rapid, Recent Radiation: Empirical and Simulated Phylogenomics of Philippine Shrews

Systematic biology, 2015-09, Vol.64 (5), p.727-740

2015

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Repeated evolution of carnivory among Indo-Australian rodents

Evolution, 2016-03, Vol.70 (3), p.653-665

2016

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Oceanic islands of Wallacea as a source for dispersal and diversification of murine rodents

Journal of biogeography, 2019-12, Vol.46 (12), p.2752-2768

2019

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Do Geological or Climatic Processes Drive Speciation in Dynamic Archipelagos? the Tempo and Mode of Diversification in Southeast Asian Shrews

Evolution, 2009-10, Vol.63 (10), p.2595-2610

2009

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Rethinking host range in Pneumocystis

PLoS pathogens, 2020-09, Vol.16 (9), p.e1008824-e1008824

2020

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Evolutionary Processes of Diversification in a Model Island Archipelago

Annual review of ecology, evolution, and systematics, 2013-01, Vol.44 (1), p.411-435

2013

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The role of repeated sea-level fluctuations in the generation of shrew (Soricidae: Crocidura) diversity in the Philippine Archipelago

Molecular phylogenetics and evolution, 2009-10, Vol.53 (1), p.171-181

2009

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Local endemism and within-island diversification of shrews illustrate the importance of speciation in building Sundaland mammal diversity

Molecular ecology, 2016-10, Vol.25 (20), p.5158-5173

2016

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Colonization of the Philippines from Taiwan: a multi-locus test of the biogeographic and phylogenetic relationships of isolated populations of shrews

Journal of biogeography, 2010-08, Vol.37 (8), p.1504-1514

2010

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Integrating phylogenetic and taxonomic evidence illuminates complex biogeographic patterns along Huxley's modification of Wallace's Line

Journal of biogeography, 2010-11, Vol.37 (11), p.2054-2066

2010

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Expanded host diversity and geographic distribution of hantaviruses in sub-Saharan Africa

Journal of virology, 2014-07, Vol.88 (13), p.7663-7667

2014

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Conservation genetics of the Philippine tarsier: cryptic genetic variation restructures conservation priorities for an island archipelago primate

PloS one, 2014-08, Vol.9 (8), p.e104340-e104340

2014

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A new genus and species of omnivorous rodent (Muridae: Murinae) from Sulawesi, nested within a clade of endemic carnivores

Journal of mammalogy, 2016-06, Vol.97 (3), p.978-991

2016

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SEGUL: Ultrafast, memory-efficient and mobile-friendly software for manipulating and summarizing phylogenomic datasets

Molecular ecology resources, 2024-04, p.e13964-e13964

2024

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Modeling Mito-nuclear Compatibility and Its Role in Species Identification

Systematic biology, 2021-01, Vol.70 (1), p.133

2021

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Molecular data from the holotype of the enigmatic Bornean Black Shrew, Suncus ater Medway, 1965 (Soricidae, Crocidurinae), place it in the genus Palawanosorex

ZooKeys, 2022-12, Vol.1137 (4), p.17-31

2022

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Evolutionary history of the Paradoxurus palm civets - a new model for Asian biogeography

Journal of biogeography, 2010-11, Vol.37 (11), p.2077-2097

2010

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Predicting Species Boundaries and Assessing Undescribed Diversity in Pneumocystis, an Obligate Lung Symbiont

Journal of fungi (Basel), 2022-07, Vol.8 (8), p.799

2022

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Molecules and fossils tell distinct yet complementary stories of mammal diversification

Current biology, 2021-10, Vol.31 (19), p.4195-4206.e3

2021

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Species interactions during diversification and community assembly in an island radiation of shrews

PloS one, 2011-07, Vol.6 (7), p.e21885

2011

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A phylogenomic rodent tree reveals the repeated evolution of masseter architectures

Proceedings of the Royal Society. B, Biological sciences, 2019-05, Vol.286 (1902), p.20190672-20190672

2019

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Phylogeography and historical demography of Polypedates leucomystax in the islands of Indonesia and the Philippines: Evidence for recent human-mediated range expansion?

Molecular phylogenetics and evolution, 2010-11, Vol.57 (2), p.598-619

2010

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Convergent evolution of olfactory and thermoregulatory capacities in small amphibious mammals

Proceedings of the National Academy of Sciences - PNAS, 2020-04, Vol.117 (16), p.8958-8965

2020

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Inferring the mammal tree: Species-level sets of phylogenies for questions in ecology, evolution, and conservation

The Challenges of Resolving a Rapid, Recent Radiation: Empirical and Simulated Phylogenomics of Philippine Shrews

Repeated evolution of carnivory among Indo-Australian rodents

Oceanic islands of Wallacea as a source for dispersal and diversification of murine rodents

Do Geological or Climatic Processes Drive Speciation in Dynamic Archipelagos? the Tempo and Mode of Diversification in Southeast Asian Shrews

Rethinking host range in Pneumocystis

Evolutionary Processes of Diversification in a Model Island Archipelago

Cryptic Patterns of Speciation in Cryptic Primates: Microendemic Mouse Lemurs and the Multispecies Coalescent

The role of repeated sea-level fluctuations in the generation of shrew (Soricidae: Crocidura) diversity in the Philippine Archipelago

Local endemism and within-island diversification of shrews illustrate the importance of speciation in building Sundaland mammal diversity

Colonization of the Philippines from Taiwan: a multi-locus test of the biogeographic and phylogenetic relationships of isolated populations of shrews

Integrating phylogenetic and taxonomic evidence illuminates complex biogeographic patterns along Huxley's modification of Wallace's Line

Expanded host diversity and geographic distribution of hantaviruses in sub-Saharan Africa

Conservation genetics of the Philippine tarsier: cryptic genetic variation restructures conservation priorities for an island archipelago primate

A new genus and species of omnivorous rodent (Muridae: Murinae) from Sulawesi, nested within a clade of endemic carnivores

SEGUL: Ultrafast, memory-efficient and mobile-friendly software for manipulating and summarizing phylogenomic datasets

Modeling Mito-nuclear Compatibility and Its Role in Species Identification

Molecular data from the holotype of the enigmatic Bornean Black Shrew, Suncus ater Medway, 1965 (Soricidae, Crocidurinae), place it in the genus Palawanosorex

Evolutionary history of the Paradoxurus palm civets - a new model for Asian biogeography

Predicting Species Boundaries and Assessing Undescribed Diversity in Pneumocystis, an Obligate Lung Symbiont

Molecules and fossils tell distinct yet complementary stories of mammal diversification

Species interactions during diversification and community assembly in an island radiation of shrews

A phylogenomic rodent tree reveals the repeated evolution of masseter architectures

Phylogeography and historical demography of Polypedates leucomystax in the islands of Indonesia and the Philippines: Evidence for recent human-mediated range expansion?

Convergent evolution of olfactory and thermoregulatory capacities in small amphibious mammals

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