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Cell-specific Analysis of the Tomato Pollen Proteome from Pollen Mother Cell to Mature Pollen Provides Evidence for Developmental Priming

Journal of proteome research, 2013-11, Vol.12 (11), p.4892-4903

2013

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Identification of Novel in vivo MAP Kinase Substrates in Arabidopsis thaliana Through Use of Tandem Metal Oxide Affinity Chromatography

Molecular & cellular proteomics, 2013-02, Vol.12 (2), p.369-380

2013

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Comprehensive Cell-specific Protein Analysis in Early and Late Pollen Development from Diploid Microsporocytes to Pollen Tube Growth

Molecular & cellular proteomics, 2014-01, Vol.13 (1), p.295-310

2014

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Using ProtMAX to create high-mass-accuracy precursor alignments from label-free quantitative mass spectrometry data generated in shotgun proteomics experiments

Nature protocols, 2013-03, Vol.8 (3), p.595-601

2013

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MASCP Gator: An Aggregation Portal for the Visualization of Arabidopsis Proteomics Data

Plant physiology (Bethesda), 2011-01, Vol.155 (1), p.259-270

2011

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Automated protein turnover calculations from 15N partial metabolic labeling LC/MS shotgun proteomics data

PloS one, 2014-04, Vol.9 (4), p.e94692-e94692

2014

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Automatic assignment of EC numbers

PLoS computational biology, 2010-01, Vol.6 (1), p.e1000661-e1000661

2010

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Automatic assignment of reaction operators to enzymatic reactions

Bioinformatics, 2009-12, Vol.25 (23), p.3135-3142

2009

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Possible Role of Nutritional Priming for Early Salt and Drought Stress Responses in Medicago truncatula

Frontiers in plant science, 2012-01, Vol.3, p.285-285

2012

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Protein Identification by MALDI-TOF-MS Peptide Mapping: A New Strategy

Analytical chemistry (Washington), 2002-04, Vol.74 (8), p.1760-1771

2002

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Phytochemical composition of Potentilla anserina L. analyzed by an integrative GC-MS and LC-MS metabolomics platform

Metabolomics, 2013-06, Vol.9 (3), p.599-607

2013

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Granger causality in integrated GC–MS and LC–MS metabolomics data reveals the interface of primary and secondary metabolism

Metabolomics, 2013-06, Vol.9 (3), p.564-574

2013

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Heat-Treatment-Responsive Proteins in Different Developmental Stages of Tomato Pollen Detected by Targeted Mass Accuracy Precursor Alignment (tMAPA)

Journal of proteome research, 2015-11, Vol.14 (11), p.4463-4471

2015

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ProMEX - a mass spectral reference database for plant proteomics

Frontiers in plant science, 2012-01, Vol.3, p.125-125

2012

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Targeted proteomics for Chlamydomonas reinhardtii combined with rapid subcellular protein fractionation, metabolomics and metabolic flux analyses

Molecular bioSystems, 2010-01, Vol.6 (6), p.1018-1031

2010

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The different proteomes of Chlamydomonas reinhardtii

Journal of proteomics, 2012-10, Vol.75 (18), p.5883-5887

2012

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MAPA Distinguishes Genotype-Specific Variability of Highly Similar Regulatory Protein Isoforms in Potato Tuber

Journal of proteome research, 2011-07, Vol.10 (7), p.2979-2991

2011

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Automatic Assignment of EC Numbers: e1000661

PLoS computational biology, 2010-01, Vol.6 (1)

2010

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A Calibration Method That Simplifies and Improves Accurate Determination of Peptide Molecular Masses by MALDI-TOF MS

Analytical chemistry (Washington), 2002-08, Vol.74 (15), p.3915-3923

2002

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Large-gel two-dimensional electrophoresis-matrix assisted laser desorption/ionization-time of flight-mass spectrometry: An analytical challenge for studying complex protein mixtures

Electrophoresis, 2001-08, Vol.22 (14), p.2844-2855

2001

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From proteomics to systems biology: MAPA, MASS WESTERN, PROMEX, and COVAIN as a user-oriented platform

Methods in molecular biology (Clifton, N.J.), 2014, Vol.1072, p.15

2014

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Improvements in Protein Identification by MALDI-TOF-MS Peptide Mapping

Analytical chemistry (Washington), 2000-07, Vol.72 (13), p.2741-2750

2000

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MASCP Gator: An Aggregation Portal for the Visualization of Arabidopsis Proteomics Data1[C][OA]

Plant physiology (Bethesda), 2011-01, Vol.155 (1), p.259

2011

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MASCP Gator: An Aggregation Portal for the Visualization of Arabidopsis Proteomics Data1[C][OA]

Plant physiology (Bethesda), 2010-11, Vol.155 (1), p.259-270

2010

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Targeted proteomics for Chlamydomonas reinhardtii combined with rapid subcellular protein fractionation, metabolomics and metabolic flux analysesElectronic supplementary information (ESI) available: Additional figures and tables. See DOI: 10.1039/b920913a

2010-05

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Cell-specific Analysis of the Tomato Pollen Proteome from Pollen Mother Cell to Mature Pollen Provides Evidence for Developmental Priming

Identification of Novel in vivo MAP Kinase Substrates in Arabidopsis thaliana Through Use of Tandem Metal Oxide Affinity Chromatography

Comprehensive Cell-specific Protein Analysis in Early and Late Pollen Development from Diploid Microsporocytes to Pollen Tube Growth

Using ProtMAX to create high-mass-accuracy precursor alignments from label-free quantitative mass spectrometry data generated in shotgun proteomics experiments

MASCP Gator: An Aggregation Portal for the Visualization of Arabidopsis Proteomics Data

Automated protein turnover calculations from 15N partial metabolic labeling LC/MS shotgun proteomics data

Automatic assignment of EC numbers

Automatic assignment of reaction operators to enzymatic reactions

Possible Role of Nutritional Priming for Early Salt and Drought Stress Responses in Medicago truncatula

Protein Identification by MALDI-TOF-MS Peptide Mapping: A New Strategy

Phytochemical composition of Potentilla anserina L. analyzed by an integrative GC-MS and LC-MS metabolomics platform

Granger causality in integrated GC–MS and LC–MS metabolomics data reveals the interface of primary and secondary metabolism

Heat-Treatment-Responsive Proteins in Different Developmental Stages of Tomato Pollen Detected by Targeted Mass Accuracy Precursor Alignment (tMAPA)

ProMEX - a mass spectral reference database for plant proteomics

Targeted proteomics for Chlamydomonas reinhardtii combined with rapid subcellular protein fractionation, metabolomics and metabolic flux analyses

The different proteomes of Chlamydomonas reinhardtii

MAPA Distinguishes Genotype-Specific Variability of Highly Similar Regulatory Protein Isoforms in Potato Tuber

Automatic Assignment of EC Numbers: e1000661

A Calibration Method That Simplifies and Improves Accurate Determination of Peptide Molecular Masses by MALDI-TOF MS

Large-gel two-dimensional electrophoresis-matrix assisted laser desorption/ionization-time of flight-mass spectrometry: An analytical challenge for studying complex protein mixtures

From proteomics to systems biology: MAPA, MASS WESTERN, PROMEX, and COVAIN as a user-oriented platform

Improvements in Protein Identification by MALDI-TOF-MS Peptide Mapping

MASCP Gator: An Aggregation Portal for the Visualization of Arabidopsis Proteomics Data1[C][OA]

MASCP Gator: An Aggregation Portal for the Visualization of Arabidopsis Proteomics Data1[C][OA]

Targeted proteomics for Chlamydomonas reinhardtii combined with rapid subcellular protein fractionation, metabolomics and metabolic flux analysesElectronic supplementary information (ESI) available: Additional figures and tables. See DOI: 10.1039/b920913a

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