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ChromHMM: automating chromatin-state discovery and characterization

Nature methods, 2012-03, Vol.9 (3), p.215

2012

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Large-scale imputation of epigenomic datasets for systematic annotation of diverse human tissues

Nature biotechnology, 2015-04, Vol.33 (4), p.364-376

2015

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Discovery and characterization of chromatin states for systematic annotation of the human genome

Nature biotechnology, 2010-08, Vol.28 (8), p.817-825

2010

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Universal annotation of the human genome through integration of over a thousand epigenomic datasets

Genome Biology, 2022-01, Vol.23 (1), p.9-9, Article 9

2022

Volltextzugriff (PDF)

STEM: a tool for the analysis of short time series gene expression data

BMC bioinformatics, 2006-04, Vol.7 (1), p.191-191, Article 191

2006

Volltextzugriff (PDF)

Universal chromatin state annotation of the mouse genome

Genome Biology, 2023-06, Vol.24 (1), p.153-153, Article 153

2023

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ChromGene: gene-based modeling of epigenomic data

Genome Biology, 2023-09, Vol.24 (1), p.1-203, Article 203

2023

Volltextzugriff (PDF)

Learning a genome-wide score of human-mouse conservation at the functional genomics level

Nature communications, 2021-05, Vol.12 (1), p.2495-2495, Article 2495

2021

Volltextzugriff (PDF)

Cooperative Binding of Transcription Factors Orchestrates Reprogramming

Cell, 2017-01, Vol.168 (3), p.442-459.e20

2017

Volltextzugriff (PDF)

Decentralized Applications: The Blockchain-Empowered Software System

IEEE access, 2018-01, Vol.6, p.53019-53033

2018

Volltextzugriff (PDF)

Chromosome conformation elucidates regulatory relationships in developing human brain

Nature (London), 2016-10, Vol.538 (7626), p.523-527

2016

Volltextzugriff (PDF)

ChromTime: modeling spatio-temporal dynamics of chromatin marks

Genome Biology, 2018-08, Vol.19 (1), p.109-109, Article 109

2018

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Interplay between chromatin state, regulator binding, and regulatory motifs in six human cell types

Genome research, 2013-07, Vol.23 (7), p.1142

2013

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Long-Range Chromatin Contacts in Embryonic Stem Cells Reveal a Role for Pluripotency Factors and Polycomb Proteins in Genome Organization

Cell stem cell, 2013-11, Vol.13 (5), p.602-616

2013

Volltextzugriff (PDF)

Mapping and analysis of chromatin state dynamics in nine human cell types

Nature (London), 2011-05, Vol.473 (7345), p.43-49

2011

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Genome-scale high-resolution mapping of activating and repressive nucleotides in regulatory regions

Nature biotechnology, 2016-11, Vol.34 (11), p.1180-1190

2016

Volltextzugriff (PDF)

Chromatin-state discovery and genome annotation with ChromHMM

Nature protocols, 2017-12, Vol.12 (12), p.2478-2492

2017

Volltextzugriff (PDF)

Investigating enhancer evolution with massively parallel reporter assays

Genome Biology, 2018-08, Vol.19 (1), p.114-114, Article 114

2018

Volltextzugriff (PDF)

Systematic dissection of regulatory motifs in 2000 predicted human enhancers using a massively parallel reporter assay

Genome research, 2013-05, Vol.23 (5), p.800

2013

Volltextzugriff (PDF)

Alzheimer's disease: early alterations in brain DNA methylation at ANK1, BIN1, RHBDF2 and other loci

Nature neuroscience, 2014-09, Vol.17 (9), p.1156-1163

2014

Volltextzugriff (PDF)

A mammalian methylation array for profiling methylation levels at conserved sequences

Nature communications, 2022-02, Vol.13 (1), p.783-13, Article 783

2022

Volltextzugriff (PDF)

Evidence of reduced recombination rate in human regulatory domains

Genome Biology, 2017-10, Vol.18 (1), p.193-193, Article 193

2017

Volltextzugriff (PDF)

RFECS: a random-forest based algorithm for enhancer identification from chromatin state

PLoS computational biology, 2013-03, Vol.9 (3), p.e1002968

2013

Volltextzugriff (PDF)

Integrative annotation of chromatin elements from ENCODE data

Nucleic acids research, 2013-01, Vol.41 (2), p.827

2013

Volltextzugriff (PDF)

A Novel Cross-Layer Adaptive Fuzzy-Based Ad Hoc On-Demand Distance Vector Routing Protocol for MANETs

IEEE access, 2023, Vol.11, p.50805-50822

2023

Volltextzugriff (PDF)

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ChromHMM: automating chromatin-state discovery and characterization

Large-scale imputation of epigenomic datasets for systematic annotation of diverse human tissues

Discovery and characterization of chromatin states for systematic annotation of the human genome

Universal annotation of the human genome through integration of over a thousand epigenomic datasets

STEM: a tool for the analysis of short time series gene expression data

Universal chromatin state annotation of the mouse genome

ChromGene: gene-based modeling of epigenomic data

Learning a genome-wide score of human-mouse conservation at the functional genomics level

Cooperative Binding of Transcription Factors Orchestrates Reprogramming

Decentralized Applications: The Blockchain-Empowered Software System

Chromosome conformation elucidates regulatory relationships in developing human brain

ChromTime: modeling spatio-temporal dynamics of chromatin marks

Interplay between chromatin state, regulator binding, and regulatory motifs in six human cell types

Long-Range Chromatin Contacts in Embryonic Stem Cells Reveal a Role for Pluripotency Factors and Polycomb Proteins in Genome Organization

Mapping and analysis of chromatin state dynamics in nine human cell types

Genome-scale high-resolution mapping of activating and repressive nucleotides in regulatory regions

Chromatin-state discovery and genome annotation with ChromHMM

Investigating enhancer evolution with massively parallel reporter assays

Systematic dissection of regulatory motifs in 2000 predicted human enhancers using a massively parallel reporter assay

Alzheimer's disease: early alterations in brain DNA methylation at ANK1, BIN1, RHBDF2 and other loci

A mammalian methylation array for profiling methylation levels at conserved sequences

Evidence of reduced recombination rate in human regulatory domains

RFECS: a random-forest based algorithm for enhancer identification from chromatin state

Integrative annotation of chromatin elements from ENCODE data

A Novel Cross-Layer Adaptive Fuzzy-Based Ad Hoc On-Demand Distance Vector Routing Protocol for MANETs

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