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A practical guide to evaluating colocalization in biological microscopy

American Journal of Physiology: Cell Physiology, 2011-04, Vol.300 (4), p.C723-C742

2011

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Digital Image Analysis Tools Developed by the Indiana O'Brien Center

Frontiers in physiology, 2021-12, Vol.12, p.812170-812170

Dunn, Kenneth W

2021

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Statistical tests for measures of colocalization in biological microscopy

Journal of microscopy (Oxford), 2013-12, Vol.252 (3), p.295-302

2013

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NISNet3D: three-dimensional nuclear synthesis and instance segmentation for fluorescence microscopy images

Scientific reports, 2023-06, Vol.13 (1), p.9533-9533, Article 9533

2023

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Two-Photon Intravital Fluorescence Lifetime Imaging of the Kidney Reveals Cell-Type Specific Metabolic Signatures

Journal of the American Society of Nephrology, 2017-08, Vol.28 (8), p.2420-2430

2017

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Reducing target binding affinity improves the therapeutic index of anti-MET antibody-drug conjugate in tumor bearing animals

PloS one, 2024-04, Vol.19 (4), p.e0293703-e0293703

2024

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Modeling of xenobiotic transport and metabolism in virtual hepatic lobule models

PloS one, 2018-09, Vol.13 (9), p.e0198060-e0198060

2018

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Endotoxin Uptake by S1 Proximal Tubular Segment Causes Oxidative Stress in the Downstream S2 Segment

Journal of the American Society of Nephrology, 2011-08, Vol.22 (8), p.1505-1516

2011

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Integration of spatial and single-cell transcriptomics localizes epithelial cell-immune cross-talk in kidney injury

JCI insight, 2021-06, Vol.6 (12)

2021

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Epigenetic basis of diabetic vasculopathy

Frontiers in endocrinology (Lausanne), 2022-12, Vol.13, p.989844

2022

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A practical method for monitoring FRET-based biosensors in living animals using two-photon microscopy

American Journal of Physiology: Cell Physiology, 2015-12, Vol.309 (11), p.C724-C735

2015

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Neonatal Fc receptor mediates internalization of Fc in transfected human endothelial cells

Molecular biology of the cell, 2008-12, Vol.19 (12), p.5490-5505

2008

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DeepSynth: Three-dimensional nuclear segmentation of biological images using neural networks trained with synthetic data

Scientific reports, 2019-12, Vol.9 (1), p.18295-15, Article 18295

2019

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Rab10 regulates membrane transport through early endosomes of polarized Madin-Darby canine kidney cells

Molecular biology of the cell, 2006-07, Vol.17 (7), p.3156-3175

2006

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Quantitative Large-Scale Three-Dimensional Imaging of Human Kidney Biopsies: A Bridge to Precision Medicine in Kidney Disease

Nephron (2015), 2018-01, Vol.140 (2), p.134-139

2018

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Effects of IFN-γ on intracellular trafficking and activity of macrophage NADPH oxidase flavocytochrome b558

Journal of leukocyte biology, 2012-10, Vol.92 (4), p.869-882

2012

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Two-Photon Imaging within the Murine Thorax without Respiratory and Cardiac Motion Artifact

The American journal of pathology, 2011-07, Vol.179 (1), p.75-82

2011

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Macrophage NADPH Oxidase Flavocytochrome b Localizes to the Plasma Membrane and Rab11-Positive Recycling Endosomes

The Journal of immunology (1950), 2009-02, Vol.182 (4), p.2325-2339

2009

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Functional studies of the kidney of living animals using multicolor two-photon microscopy

American Journal of Physiology: Cell Physiology, 2002-09, Vol.283 (3), p.C905-C916

2002

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Proximal tubule role in albumin homeostasis: controversy, species differences, and the contributions of intravital microscopy

Kidney international, 2023-12, Vol.104 (6), p.1065-1069

2023

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A novel method to determine specificity and sensitivity of the TUNEL reaction in the quantitation of apoptosis

American Journal of Physiology: Cell Physiology, 2003-05, Vol.284 (5), p.C1309-C1318

2003

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The Indiana O'Brien Center for Advanced Renal Microscopic Analysis

American journal of physiology. Renal physiology, 2021-05, Vol.320 (5), p.F671-F682

2021

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A simple approach for measuring FRET in fluorescent biosensors using two-photon microscopy

Nature protocols, 2016-11, Vol.11 (11), p.2066-2080

2016

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Quantitative Kinetic Models from Intravital Microscopy: A Case Study Using Hepatic Transport

The journal of physical chemistry. B, 2019-08, Vol.123 (34), p.7302-7312

2019

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Automatic segmentation of intravital fluorescence microscopy images by K-means clustering of FLIM phasors

Optics letters, 2019-08, Vol.44 (16), p.3928-3931

2019

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A practical guide to evaluating colocalization in biological microscopy

Digital Image Analysis Tools Developed by the Indiana O'Brien Center

Statistical tests for measures of colocalization in biological microscopy

NISNet3D: three-dimensional nuclear synthesis and instance segmentation for fluorescence microscopy images

Two-Photon Intravital Fluorescence Lifetime Imaging of the Kidney Reveals Cell-Type Specific Metabolic Signatures

Reducing target binding affinity improves the therapeutic index of anti-MET antibody-drug conjugate in tumor bearing animals

Modeling of xenobiotic transport and metabolism in virtual hepatic lobule models

Endotoxin Uptake by S1 Proximal Tubular Segment Causes Oxidative Stress in the Downstream S2 Segment

Integration of spatial and single-cell transcriptomics localizes epithelial cell-immune cross-talk in kidney injury

Epigenetic basis of diabetic vasculopathy

A practical method for monitoring FRET-based biosensors in living animals using two-photon microscopy

Neonatal Fc receptor mediates internalization of Fc in transfected human endothelial cells

DeepSynth: Three-dimensional nuclear segmentation of biological images using neural networks trained with synthetic data

Rab10 regulates membrane transport through early endosomes of polarized Madin-Darby canine kidney cells

Quantitative Large-Scale Three-Dimensional Imaging of Human Kidney Biopsies: A Bridge to Precision Medicine in Kidney Disease

Effects of IFN-γ on intracellular trafficking and activity of macrophage NADPH oxidase flavocytochrome b558

Two-Photon Imaging within the Murine Thorax without Respiratory and Cardiac Motion Artifact

Macrophage NADPH Oxidase Flavocytochrome b Localizes to the Plasma Membrane and Rab11-Positive Recycling Endosomes

Functional studies of the kidney of living animals using multicolor two-photon microscopy

Proximal tubule role in albumin homeostasis: controversy, species differences, and the contributions of intravital microscopy

A novel method to determine specificity and sensitivity of the TUNEL reaction in the quantitation of apoptosis

The Indiana O'Brien Center for Advanced Renal Microscopic Analysis

A simple approach for measuring FRET in fluorescent biosensors using two-photon microscopy

Quantitative Kinetic Models from Intravital Microscopy: A Case Study Using Hepatic Transport

Automatic segmentation of intravital fluorescence microscopy images by K-means clustering of FLIM phasors

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