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A practical guide to evaluating colocalization in biological microscopy

American Journal of Physiology: Cell Physiology, 2011-04, Vol.300 (4), p.C723-C742

2011

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Digital Image Analysis Tools Developed by the Indiana O'Brien Center

Frontiers in physiology, 2021-12, Vol.12, p.812170-812170

Dunn, Kenneth W

2021

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DeepSynth: Three-dimensional nuclear segmentation of biological images using neural networks trained with synthetic data

Scientific reports, 2019-12, Vol.9 (1), p.18295-15, Article 18295

2019

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Statistical tests for measures of colocalization in biological microscopy

Journal of microscopy (Oxford), 2013-12, Vol.252 (3), p.295-302

2013

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Modeling of xenobiotic transport and metabolism in virtual hepatic lobule models

PloS one, 2018-09, Vol.13 (9), p.e0198060-e0198060

2018

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Proximal tubule role in albumin homeostasis: controversy, species differences, and the contributions of intravital microscopy

Kidney international, 2023-12, Vol.104 (6), p.1065-1069

2023

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NISNet3D: three-dimensional nuclear synthesis and instance segmentation for fluorescence microscopy images

Scientific reports, 2023-06, Vol.13 (1), p.9533-9533, Article 9533

2023

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Two-Photon Intravital Fluorescence Lifetime Imaging of the Kidney Reveals Cell-Type Specific Metabolic Signatures

Journal of the American Society of Nephrology, 2017-08, Vol.28 (8), p.2420-2430

2017

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Reducing target binding affinity improves the therapeutic index of anti-MET antibody-drug conjugate in tumor bearing animals

PloS one, 2024-04, Vol.19 (4), p.e0293703-e0293703

2024

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The Indiana O'Brien Center for Advanced Renal Microscopic Analysis

American journal of physiology. Renal physiology, 2021-05, Vol.320 (5), p.F671-F682

2021

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A simple approach for measuring FRET in fluorescent biosensors using two-photon microscopy

Nature protocols, 2016-11, Vol.11 (11), p.2066-2080

2016

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Quantitative Kinetic Models from Intravital Microscopy: A Case Study Using Hepatic Transport

The journal of physical chemistry. B, 2019-08, Vol.123 (34), p.7302-7312

2019

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Endotoxin Uptake by S1 Proximal Tubular Segment Causes Oxidative Stress in the Downstream S2 Segment

Journal of the American Society of Nephrology, 2011-08, Vol.22 (8), p.1505-1516

2011

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Epigenetic basis of diabetic vasculopathy

Frontiers in endocrinology (Lausanne), 2022-12, Vol.13, p.989844

2022

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Integration of spatial and single-cell transcriptomics localizes epithelial cell-immune cross-talk in kidney injury

JCI insight, 2021-06, Vol.6 (12)

2021

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Automatic segmentation of intravital fluorescence microscopy images by K-means clustering of FLIM phasors

Optics letters, 2019-08, Vol.44 (16), p.3928-3931

2019

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Intravital Multiphoton Microscopy with Fluorescent Bile Salts in Rats as an In Vivo Biomarker for Hepatobiliary Transport Inhibition

Drug metabolism and disposition, 2018-05, Vol.46 (5), p.704-718

2018

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Using quantitative intravital multiphoton microscopy to dissect hepatic transport in rats

Methods (San Diego, Calif.), 2017-09, Vol.128, p.40-51

2017

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Quantitative Three-Dimensional Tissue Cytometry to Study Kidney Tissue and Resident Immune Cells

Journal of the American Society of Nephrology, 2017-07, Vol.28 (7), p.2108-2118

2017

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Exploring Monte Carlo Methods

2nd edition., 2022

Volltextzugriff (PDF)

A multimodal and integrated approach to interrogate human kidney biopsies with rigor and reproducibility: guidelines from the Kidney Precision Medicine Project

Physiological genomics, 2021-01, Vol.53 (1), p.1-11

2021

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PIE-FLIM Measurements of Two Different FRET-Based Biosensor Activities in the Same Living Cells

Biophysical journal, 2020-04, Vol.118 (8), p.1820-1829

2020

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Intravital Microscopy Reveals Unforeseen Biodistribution Within the Liver and Kidney Mechanistically Connected to the Clearance of a Bifunctional Antibody

Drug metabolism and disposition, 2023-03, Vol.51 (3), p.403-412

2023

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Imaging cell biology and physiology in vivo using intravital microscopy

Methods (San Diego, Calif.), 2017-09, Vol.128, p.1-2

2017

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A practical method for monitoring FRET-based biosensors in living animals using two-photon microscopy

American Journal of Physiology: Cell Physiology, 2015-12, Vol.309 (11), p.C724-C735

2015

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A practical guide to evaluating colocalization in biological microscopy

Digital Image Analysis Tools Developed by the Indiana O'Brien Center

DeepSynth: Three-dimensional nuclear segmentation of biological images using neural networks trained with synthetic data

Statistical tests for measures of colocalization in biological microscopy

Modeling of xenobiotic transport and metabolism in virtual hepatic lobule models

Proximal tubule role in albumin homeostasis: controversy, species differences, and the contributions of intravital microscopy

NISNet3D: three-dimensional nuclear synthesis and instance segmentation for fluorescence microscopy images

Two-Photon Intravital Fluorescence Lifetime Imaging of the Kidney Reveals Cell-Type Specific Metabolic Signatures

Reducing target binding affinity improves the therapeutic index of anti-MET antibody-drug conjugate in tumor bearing animals

The Indiana O'Brien Center for Advanced Renal Microscopic Analysis

A simple approach for measuring FRET in fluorescent biosensors using two-photon microscopy

Quantitative Kinetic Models from Intravital Microscopy: A Case Study Using Hepatic Transport

Endotoxin Uptake by S1 Proximal Tubular Segment Causes Oxidative Stress in the Downstream S2 Segment

Epigenetic basis of diabetic vasculopathy

Integration of spatial and single-cell transcriptomics localizes epithelial cell-immune cross-talk in kidney injury

Automatic segmentation of intravital fluorescence microscopy images by K-means clustering of FLIM phasors

Intravital Multiphoton Microscopy with Fluorescent Bile Salts in Rats as an In Vivo Biomarker for Hepatobiliary Transport Inhibition

Using quantitative intravital multiphoton microscopy to dissect hepatic transport in rats

Quantitative Three-Dimensional Tissue Cytometry to Study Kidney Tissue and Resident Immune Cells

Exploring Monte Carlo Methods

A multimodal and integrated approach to interrogate human kidney biopsies with rigor and reproducibility: guidelines from the Kidney Precision Medicine Project

PIE-FLIM Measurements of Two Different FRET-Based Biosensor Activities in the Same Living Cells

Intravital Microscopy Reveals Unforeseen Biodistribution Within the Liver and Kidney Mechanistically Connected to the Clearance of a Bifunctional Antibody

Imaging cell biology and physiology in vivo using intravital microscopy

A practical method for monitoring FRET-based biosensors in living animals using two-photon microscopy

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