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Reprogramming of the macrophage transcriptome in response to interferon-gamma and Mycobacterium tuberculosis: signaling roles of nitric oxide synthase-2 and phagocyte oxidase

The Journal of experimental medicine, 2001-10, Vol.194 (8), p.1123-1140

2001

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Transcriptional Maps of 10 Human Chromosomes at 5-Nucleotide Resolution

Science (American Association for the Advancement of Science), 2005-05, Vol.308 (5725), p.1149-1154

2005

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A user's guide to the encyclopedia of DNA elements (ENCODE)

PLoS biology, 2011-04, Vol.9 (4), p.e1001046-e1001046

2011

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Unbiased Mapping of Transcription Factor Binding Sites along Human Chromosomes 21 and 22 Points to Widespread Regulation of Noncoding RNAs

Cell, 2004-02, Vol.116 (4), p.499-509

2004

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Examples of the complex architecture of the human transcriptome revealed by RACE and high-density tiling arrays

Genome research, 2005-07, Vol.15 (7), p.987-997

2005

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Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22

Genome research, 2004-03, Vol.14 (3), p.331-342

2004

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Large-Scale Transcriptional Activity in Chromosomes 21 and 22

Science (American Association for the Advancement of Science), 2002-05, Vol.296 (5569), p.916-919

2002

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Transcriptional landscape of the human and fly genomes: nonlinear and multifunctional modular model of transcriptomes

Cold Spring Harbor Symposia on Quantitative Biology, 2006, Vol.71, p.101-110

2006

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MyD88 primes macrophages for full-scale activation by interferon-gamma yet mediates few responses to Mycobacterium tuberculosis

The Journal of experimental medicine, 2003-10, Vol.198 (7), p.987-997

2003

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The Transcriptional Responses of Respiratory Epithelial Cells to Bordetella pertussis Reveal Host Defensive and Pathogen Counter-Defensive Strategies

Proceedings of the National Academy of Sciences - PNAS, 2000-12, Vol.97 (25), p.13847-13852

2000

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Comparing Genomes within the Species Mycobacterium tuberculosis

Genome research, 2001-04, Vol.11 (4), p.547-554

Kato-Maeda, M.

2001

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Simultaneous genotyping and species identification using hybridization pattern recognition analysis of generic Mycobacterium DNA arrays

Genome research, 1998-05, Vol.8 (5), p.435-448

1998

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Temporal Gene Regulation During HIV-1 Infection of Human CD4+ T Cells

Genome research, 2001-07, Vol.11 (7), p.1198-1204

Corbeil, J.

2001

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Detection of Deleted Genomic DNA Using a Semiautomated Computational Analysis of GeneChip Data

Genome research, 2000-12, Vol.10 (12), p.2044-2054

Salamon, H.

2000

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HIV regulation of the IL-7R: a viral mechanism for enhancing HIV-1 replication in human maci ophages in vitro

Journal of leukocyte biology, 2006-06, Vol.79 (6), p.1328-1338

2006

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Detection of deleted genomic DNA using a semiautomated computational analysis of GeneChip data

Genome research, 2000-12, Vol.10 (12), p.2044-2054

2000

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Comparing genomes within the species Mycobacterium tuberculosis

Genome research, 2001-04, Vol.11 (4), p.547-554

2001

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Temporal gene regulation during HIV-1 infection of human CD4+ T cells

Genome research, 2001-07, Vol.11 (7), p.1198-1204

2001

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Single-cell RNA sequencing of developing maize ears facilitates functional analysis and trait candidate gene discovery

Developmental cell, 2021-02, Vol.56 (4), p.557-568.e6

2021

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Prominent use of distal 5' transcription start sites and discovery of a large number of additional exons in ENCODE regions

Genome Research, 2007-06, Vol.17 (6), p.746-759

2007

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Dynamics of microRNA expression during mouse prenatal development

Genome research, 2019-11, Vol.29 (11), p.1900-1909

2019

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Predicting Failure in Additively Manufactured Parts-"The Effects of Defects"

Johns Hopkins APL technical digest, 2021-01, Vol.35 (4), p.418

2021

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High-quality chromosome scale genome assemblies of two important Sorghum inbred lines, Tx2783 and RTx436

NAR genomics and bioinformatics, 2024-09, Vol.6 (3)

2024

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Data AUDIT: Identifying Attribute Utility- and Detectability-Induced Bias in Task Models

Medical Image Computing and Computer Assisted Intervention – MICCAI 2023, p.442-452

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Toward a scalable framework for reproducible processing of volumetric, nanoscale neuroimaging datasets

Gigascience, 2020-12, Vol.9 (12)

2020

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Reprogramming of the macrophage transcriptome in response to interferon-gamma and Mycobacterium tuberculosis: signaling roles of nitric oxide synthase-2 and phagocyte oxidase

Transcriptional Maps of 10 Human Chromosomes at 5-Nucleotide Resolution

A user's guide to the encyclopedia of DNA elements (ENCODE)

Unbiased Mapping of Transcription Factor Binding Sites along Human Chromosomes 21 and 22 Points to Widespread Regulation of Noncoding RNAs

Examples of the complex architecture of the human transcriptome revealed by RACE and high-density tiling arrays

Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22

Large-Scale Transcriptional Activity in Chromosomes 21 and 22

Transcriptional landscape of the human and fly genomes: nonlinear and multifunctional modular model of transcriptomes

MyD88 primes macrophages for full-scale activation by interferon-gamma yet mediates few responses to Mycobacterium tuberculosis

The Transcriptional Responses of Respiratory Epithelial Cells to Bordetella pertussis Reveal Host Defensive and Pathogen Counter-Defensive Strategies

Comparing Genomes within the Species Mycobacterium tuberculosis

Simultaneous genotyping and species identification using hybridization pattern recognition analysis of generic Mycobacterium DNA arrays

Temporal Gene Regulation During HIV-1 Infection of Human CD4+ T Cells

Detection of Deleted Genomic DNA Using a Semiautomated Computational Analysis of GeneChip Data

HIV regulation of the IL-7R: a viral mechanism for enhancing HIV-1 replication in human maci ophages in vitro

Detection of deleted genomic DNA using a semiautomated computational analysis of GeneChip data

Comparing genomes within the species Mycobacterium tuberculosis

Temporal gene regulation during HIV-1 infection of human CD4+ T cells

Single-cell RNA sequencing of developing maize ears facilitates functional analysis and trait candidate gene discovery

Prominent use of distal 5' transcription start sites and discovery of a large number of additional exons in ENCODE regions

Dynamics of microRNA expression during mouse prenatal development

Predicting Failure in Additively Manufactured Parts-"The Effects of Defects"

High-quality chromosome scale genome assemblies of two important Sorghum inbred lines, Tx2783 and RTx436

Data AUDIT: Identifying Attribute Utility- and Detectability-Induced Bias in Task Models

Toward a scalable framework for reproducible processing of volumetric, nanoscale neuroimaging datasets

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